BLASTX nr result
ID: Zingiber24_contig00011472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011472
(222 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group] g... 88 1e-15
gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Ja... 88 1e-15
gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indi... 88 1e-15
gb|ABG22554.1| RNA recognition motif family protein, expressed [... 88 1e-15
gb|EMS66825.1| Nucleolysin TIAR [Triticum urartu] 84 2e-14
ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodi... 84 2e-14
ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232... 84 2e-14
ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa... 84 2e-14
ref|XP_006583169.1| PREDICTED: nucleolysin TIAR [Glycine max] 84 2e-14
gb|EMJ03364.1| hypothetical protein PRUPE_ppa006419mg [Prunus pe... 83 3e-14
ref|XP_006474699.1| PREDICTED: nucleolysin TIAR-like isoform X2 ... 82 7e-14
ref|XP_006474698.1| PREDICTED: nucleolysin TIAR-like isoform X1 ... 82 7e-14
ref|XP_006452848.1| hypothetical protein CICLE_v10008437mg [Citr... 82 7e-14
ref|XP_006452847.1| hypothetical protein CICLE_v10008437mg [Citr... 82 7e-14
ref|XP_006452846.1| hypothetical protein CICLE_v10008437mg [Citr... 82 7e-14
gb|EMT12646.1| Nucleolysin TIAR [Aegilops tauschii] 80 3e-13
gb|AFK42319.1| unknown [Lotus japonicus] 80 3e-13
emb|CBI35841.3| unnamed protein product [Vitis vinifera] 80 3e-13
ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera] 80 3e-13
emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera] 80 3e-13
>ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa
Japonica Group] gi|215767783|dbj|BAH00012.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein
OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein
OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SATDL Y+R LALSKM+AN
Sbjct: 343 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 402
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 403 PALMSQHAALKQA 415
>gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SATDL Y+R LALSKM+AN
Sbjct: 424 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 483
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 484 PALMSQHAALKQA 496
>gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SATDL Y+R LALSKM+AN
Sbjct: 293 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPTPFNPGMSATDLLAYERTLALSKMAAN 352
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 353 PALMSQHAALKQA 365
>gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SATDL Y+R LALSKM+AN
Sbjct: 305 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 364
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 365 PALMSQHAALKQA 377
>gb|EMS66825.1| Nucleolysin TIAR [Triticum urartu]
Length = 396
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SA DL YDR+LALSKM+A+
Sbjct: 293 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPALAPYTPGVSAADLISYDRSLALSKMAAD 352
Query: 40 QALMQGHLAMKQA 2
ALM H A++QA
Sbjct: 353 PALMGQHAALRQA 365
>ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL---XXXXXXXXPGLSATDLFGYDRALALSKMS 47
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SA DLF Y+R+LALSKM+
Sbjct: 341 NGQLVGGRQIKCSWGSKPTPPGTASAPLPPPALAVAPYTPGVSAADLFSYERSLALSKMA 400
Query: 46 ANQALMQGHLAMKQA 2
N ALM H A++QA
Sbjct: 401 GNPALMGQHAALRQA 415
>ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232331 [Cucumis sativus]
Length = 343
Score = 83.6 bits (205), Expect = 2e-14
Identities = 44/75 (58%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N +V+CGKPIKCSWGSKPTPPGT S L GLSA DL Y+R +ALSKM A Q
Sbjct: 233 NARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGAAQ 292
Query: 37 ALMQ---GHLAMKQA 2
ALM A+KQA
Sbjct: 293 ALMHPQAAQHALKQA 307
>ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 83.6 bits (205), Expect = 2e-14
Identities = 44/75 (58%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N +V+CGKPIKCSWGSKPTPPGT S L GLSA DL Y+R +ALSKM A Q
Sbjct: 310 NARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGAAQ 369
Query: 37 ALMQ---GHLAMKQA 2
ALM A+KQA
Sbjct: 370 ALMHPQAAQHALKQA 384
>ref|XP_006583169.1| PREDICTED: nucleolysin TIAR [Glycine max]
Length = 422
Score = 83.6 bits (205), Expect = 2e-14
Identities = 45/71 (63%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGTAS L PGLSATDL Y+R LA+SKM ALM
Sbjct: 325 LLCGKPIKCSWGSKPTPPGTASNPLPPPAAASLPGLSATDLLAYERQLAISKMGGVHALM 384
Query: 28 --QGHLAMKQA 2
QG +KQA
Sbjct: 385 HPQGQHHLKQA 395
>gb|EMJ03364.1| hypothetical protein PRUPE_ppa006419mg [Prunus persica]
Length = 413
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N + LCGKPIKCSWGSKPTPPGT+S L PG SA DL Y+R +ALSKM Q
Sbjct: 311 NARFLCGKPIKCSWGSKPTPPGTSSTPLPPPAAAQMPGFSAADLAAYERQMALSKMGGAQ 370
Query: 37 ALM--QGHLAMKQA 2
ALM QG A+K A
Sbjct: 371 ALMLPQGQHALKAA 384
>ref|XP_006474699.1| PREDICTED: nucleolysin TIAR-like isoform X2 [Citrus sinensis]
Length = 412
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT+S L PG SATDL Y+R +ALSK++ Q
Sbjct: 311 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 370
Query: 37 ALM 29
ALM
Sbjct: 371 ALM 373
>ref|XP_006474698.1| PREDICTED: nucleolysin TIAR-like isoform X1 [Citrus sinensis]
Length = 413
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT+S L PG SATDL Y+R +ALSK++ Q
Sbjct: 312 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 371
Query: 37 ALM 29
ALM
Sbjct: 372 ALM 374
>ref|XP_006452848.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556074|gb|ESR66088.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 417
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT+S L PG SATDL Y+R +ALSK++ Q
Sbjct: 316 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 375
Query: 37 ALM 29
ALM
Sbjct: 376 ALM 378
>ref|XP_006452847.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556073|gb|ESR66087.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 413
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT+S L PG SATDL Y+R +ALSK++ Q
Sbjct: 312 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 371
Query: 37 ALM 29
ALM
Sbjct: 372 ALM 374
>ref|XP_006452846.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556072|gb|ESR66086.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 412
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT+S L PG SATDL Y+R +ALSK++ Q
Sbjct: 311 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 370
Query: 37 ALM 29
ALM
Sbjct: 371 ALM 373
>gb|EMT12646.1| Nucleolysin TIAR [Aegilops tauschii]
Length = 506
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTASITL-XXXXXXXXPGLSATDLFGYDRALALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGTAS L PG+SA DL Y+R+LALSKM+AN
Sbjct: 397 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPALAPYTPGVSAVDLISYERSLALSKMAAN 456
Query: 40 QALMQGHLAMKQA 2
ALM A++QA
Sbjct: 457 PALMGQVAALRQA 469
>gb|AFK42319.1| unknown [Lotus japonicus]
Length = 103
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/71 (60%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQALM 29
+LCGK IKCSWGSKPTPPGTAS L PG SATDL Y+R LA+SKM ALM
Sbjct: 7 ILCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGFSATDLLAYERQLAMSKMGGVHALM 66
Query: 28 --QGHLAMKQA 2
QG +KQA
Sbjct: 67 HPQGQHPLKQA 77
>emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT+S L PGLSATDL Y+R LA+SKM
Sbjct: 308 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 367
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 368 QGQHPLKQA 376
>ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT+S L PGLSATDL Y+R LA+SKM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 380
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 381 QGQHPLKQA 389
>emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTASITLXXXXXXXXPGLSATDLFGYDRALALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT+S L PGLSATDL Y+R LA+SKM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 380
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 381 QGQHPLKQA 389