BLASTX nr result
ID: Zingiber24_contig00011305
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00011305 (846 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein... 314 3e-83 dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare] 311 2e-82 gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote... 308 2e-81 gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegi... 306 5e-81 ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein... 305 1e-80 gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi... 305 1e-80 gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo... 305 1e-80 ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g... 305 1e-80 ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein... 289 1e-75 ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S... 285 2e-74 ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma... 276 9e-72 ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293... 273 4e-71 gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz... 270 5e-70 ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 230 4e-58 ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 229 1e-57 gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus... 228 3e-57 ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 228 3e-57 ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein... 225 1e-56 ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 224 3e-56 gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 224 4e-56 >ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza brachyantha] Length = 645 Score = 314 bits (804), Expect = 3e-83 Identities = 167/282 (59%), Positives = 199/282 (70%), Gaps = 1/282 (0%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L K+SELDREMILAERS +IDDYKLK++ARASSSK E Sbjct: 98 DSAPSVGSDLYKDEEDKEQLEKLSELDREMILAERSARIDDYKLKQLARASSSKTEKSRR 157 Query: 664 XXXXXXXXXXXXXXRN-DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXX 488 D++AAKSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 158 DSSPPPPLSRARSSTRTDRSAAKSALDELRAKRMRQQDPEGYRNRFKDLIPQSGS----- 212 Query: 487 XXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPK 308 PPR R AASPPSD SN+G++ GR + SPSRLD K Sbjct: 213 ----PPRRR----AASPPSDGSNDGDNRGRTNDHGRITDDTRDDEFDE---SPSRLDPLK 261 Query: 307 FEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPE 128 F+DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGKT+SG P+Y+LC+VRNVDA DP+ Sbjct: 262 FDDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKTKSGIPQYRLCIVRNVDANDPD 321 Query: 127 KHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 +HYKLE YTT K+LN +W ++ +AARWQM VSDS P DEF Sbjct: 322 RHYKLEGYTTCKYLNVVWDNETTAARWQMTQVSDSFPTEDEF 363 >dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 661 Score = 311 bits (796), Expect = 2e-82 Identities = 165/281 (58%), Positives = 197/281 (70%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK + Sbjct: 112 DSAPSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARK 171 Query: 664 XXXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXX 485 R D++A KSAL+ELRAKRMRQQDPDGYR+R +DL Sbjct: 172 DSPPPPPSRLRASARTDRSATKSALDELRAKRMRQQDPDGYRNRFKDLIAKSGGS----- 226 Query: 484 XXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKF 305 P R R A SPPSD SN+G + GR++ SPSRLD KF Sbjct: 227 ---PNRRR----AGSPPSDGSNDGGNRGRMNDHAGIAEDNRDDEFDE---SPSRLDPLKF 276 Query: 304 EDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEK 125 +DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGKT+SG PKY+LC+VRNVDA+DP++ Sbjct: 277 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKTKSGTPKYRLCIVRNVDASDPDR 336 Query: 124 HYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE Y T K+LN +W ++A+AARWQM VSDSP L +EF Sbjct: 337 QYKLESYETCKYLNVVWDNEANAARWQMTQVSDSPVLEEEF 377 >gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum urartu] Length = 681 Score = 308 bits (789), Expect = 2e-81 Identities = 163/281 (58%), Positives = 196/281 (69%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK + Sbjct: 133 DSAPSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARK 192 Query: 664 XXXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXX 485 R D++A KSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 193 DSPPPPPSRLRASARTDRSATKSALDELRAKRMRQQDPEGYRNRFKDLVPKSGGS----- 247 Query: 484 XXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKF 305 P R R A +PPSD SN+G + GR++ SPSRLD KF Sbjct: 248 ---PNRRR----AGTPPSDGSNDGGNRGRMNDHVGIAEDNRDDEFDE---SPSRLDPLKF 297 Query: 304 EDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEK 125 +DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGKT+SG PKY+LC+VRNVDA DP++ Sbjct: 298 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKTKSGTPKYRLCIVRNVDANDPDR 357 Query: 124 HYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE Y T K+LN +W ++A+AARWQM VSDSP L +EF Sbjct: 358 QYKLESYETCKYLNVVWDNEANAARWQMTQVSDSPVLEEEF 398 >gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegilops tauschii] Length = 661 Score = 306 bits (785), Expect = 5e-81 Identities = 163/281 (58%), Positives = 195/281 (69%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK + Sbjct: 112 DSAPSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARK 171 Query: 664 XXXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXX 485 R D++A KSAL+ELRAKRMRQQDP+ YRSR +DL Sbjct: 172 DSPPPPPSRLRASARTDRSATKSALDELRAKRMRQQDPEAYRSRFKDLVPKSGSS----- 226 Query: 484 XXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKF 305 P R R A +PPSD SN+G GR+++ SPSRLD KF Sbjct: 227 ---PNRRR----AGTPPSDGSNDGGHRGRMNNHVGIAEDNRDDEFDE---SPSRLDPLKF 276 Query: 304 EDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEK 125 +DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGKT+SG PKY+LC+VRNVDA DP++ Sbjct: 277 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKTKSGTPKYRLCIVRNVDANDPDR 336 Query: 124 HYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE Y T K+LN +W ++A+AARWQM VSDSP L +EF Sbjct: 337 QYKLESYETCKYLNVVWDNEANAARWQMTQVSDSPVLEEEF 377 >ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria italica] Length = 650 Score = 305 bits (782), Expect = 1e-80 Identities = 163/283 (57%), Positives = 196/283 (69%), Gaps = 2/283 (0%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L KMSELDRE+ILAERS++IDDYKLK+MAR+ + K Sbjct: 102 DSAPSVGSDLYKDEEDKEKLEKMSELDRELILAERSSRIDDYKLKQMARSKTGKAGARKD 161 Query: 664 XXXXXXXXXXXXXXRNDKT--AAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXX 491 R DK+ A KSALNELRAKRMRQQDP+ YR+R +DL Sbjct: 162 SSPPPPPSRMRSSTRADKSGSATKSALNELRAKRMRQQDPEAYRNRFKDLLPQSGS---- 217 Query: 490 XXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAP 311 P RHR A SPPSD SN+G++ GR+ SPSR+D Sbjct: 218 -----PTRHR----AGSPPSDGSNDGDNRGRLKDHGRIADDGRDDEFDE---SPSRIDPL 265 Query: 310 KFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDP 131 KF+DVK IT+RRSKLVKWFMEPFFEE ++GCFVRLGIGKT+SG P+Y+LC+VRNVDA+DP Sbjct: 266 KFDDVKSITLRRSKLVKWFMEPFFEETVSGCFVRLGIGKTKSGTPRYRLCIVRNVDASDP 325 Query: 130 EKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 ++ YKLE YTT K+LN +W S+A+AARWQM VSDSPP +EF Sbjct: 326 DRKYKLESYTTCKYLNVVWDSEANAARWQMTQVSDSPPNEEEF 368 >gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group] Length = 780 Score = 305 bits (782), Expect = 1e-80 Identities = 164/284 (57%), Positives = 197/284 (69%), Gaps = 3/284 (1%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS + Sbjct: 237 DSAPSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKS 296 Query: 664 XXXXXXXXXXXXXXRN---DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXX 494 + D++AAKSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 297 RRDSSPPPPPSRARSSARTDRSAAKSALDELRAKRMRQQDPEGYRNRFKDLIPQSGS--- 353 Query: 493 XXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDA 314 PPR R A SPPSD SN+G++ GRI E SPSRLD Sbjct: 354 ------PPRRR----AGSPPSDGSNDGDNRGRITDETRDDEFDE---------SPSRLDP 394 Query: 313 PKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATD 134 KF+DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGK++SG P Y+LC+VRNVDA D Sbjct: 395 LKFDDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDAND 454 Query: 133 PEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 P++ YKLE YTT K+LN +W ++A+AARWQM VSDS P +EF Sbjct: 455 PDRKYKLEGYTTCKYLNVVWDNEANAARWQMTQVSDSFPSEEEF 498 >gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group] Length = 653 Score = 305 bits (782), Expect = 1e-80 Identities = 164/284 (57%), Positives = 197/284 (69%), Gaps = 3/284 (1%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS + Sbjct: 110 DSAPSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKS 169 Query: 664 XXXXXXXXXXXXXXRN---DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXX 494 + D++AAKSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 170 RRDSSPPPPPSRARSSARTDRSAAKSALDELRAKRMRQQDPEGYRNRFKDLIPQSGS--- 226 Query: 493 XXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDA 314 PPR R A SPPSD SN+G++ GRI E SPSRLD Sbjct: 227 ------PPRRR----AGSPPSDGSNDGDNRGRITDETRDDEFDE---------SPSRLDP 267 Query: 313 PKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATD 134 KF+DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGK++SG P Y+LC+VRNVDA D Sbjct: 268 LKFDDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDAND 327 Query: 133 PEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 P++ YKLE YTT K+LN +W ++A+AARWQM VSDS P +EF Sbjct: 328 PDRKYKLEGYTTCKYLNVVWDNEANAARWQMTQVSDSFPSEEEF 371 >ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] gi|113649443|dbj|BAF29955.1| Os12g0535900, partial [Oryza sativa Japonica Group] Length = 599 Score = 305 bits (782), Expect = 1e-80 Identities = 164/284 (57%), Positives = 197/284 (69%), Gaps = 3/284 (1%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS + Sbjct: 56 DSAPSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKS 115 Query: 664 XXXXXXXXXXXXXXRN---DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXX 494 + D++AAKSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 116 RRDSSPPPPPSRARSSARTDRSAAKSALDELRAKRMRQQDPEGYRNRFKDLIPQSGS--- 172 Query: 493 XXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDA 314 PPR R A SPPSD SN+G++ GRI E SPSRLD Sbjct: 173 ------PPRRR----AGSPPSDGSNDGDNRGRITDETRDDEFDE---------SPSRLDP 213 Query: 313 PKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATD 134 KF+DVK IT+RRSKLVKWFMEPFFE+L++GCFVRLGIGK++SG P Y+LC+VRNVDA D Sbjct: 214 LKFDDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDAND 273 Query: 133 PEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 P++ YKLE YTT K+LN +W ++A+AARWQM VSDS P +EF Sbjct: 274 PDRKYKLEGYTTCKYLNVVWDNEANAARWQMTQVSDSFPSEEEF 317 >ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Brachypodium distachyon] Length = 658 Score = 289 bits (739), Expect = 1e-75 Identities = 155/282 (54%), Positives = 195/282 (69%), Gaps = 1/282 (0%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKK-MARASSSKMEXXX 668 DSAPSVGSDLYKD+ DKE+L M+EL REMILAERST+ID+YKLKK +AR +++ Sbjct: 108 DSAPSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDEYKLKKKLARTATTSKTEAR 167 Query: 667 XXXXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXX 488 R D++A KSAL+ELRAKRMRQQDP+GYR+R +DL Sbjct: 168 KDSPPPPLSRSRSSTRTDRSATKSALDELRAKRMRQQDPEGYRNRFKDLVTKTGS----- 222 Query: 487 XXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPK 308 P R R A SPPSD SN+G++ GR++ SPSRL K Sbjct: 223 ----PTRRR----AGSPPSDGSNDGDNRGRMNDHGGIADDAREDEFDE---SPSRLVPLK 271 Query: 307 FEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPE 128 F+DVK IT+RR+KLVKWFMEPFFE+L++GCFVR+GIGKT+SG PKY+LC+VRNVDA+DP+ Sbjct: 272 FDDVKSITLRRTKLVKWFMEPFFEDLVSGCFVRIGIGKTKSG-PKYRLCIVRNVDASDPD 330 Query: 127 KHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 + YKL+ YTT K+LN +W ++A+AARWQM VSDSP L +EF Sbjct: 331 RQYKLDSYTTCKYLNVVWDNEANAARWQMTQVSDSPVLEEEF 372 >ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor] gi|241942942|gb|EES16087.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor] Length = 656 Score = 285 bits (728), Expect = 2e-74 Identities = 158/287 (55%), Positives = 189/287 (65%), Gaps = 6/287 (2%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE L MSEL REMILA+R T+ DYKLK+ ARAS SK + Sbjct: 104 DSAPSVGSDLYKDEDDKERLENMSELQREMILADRGTRAADYKLKQRARASLSKTDKLGA 163 Query: 664 XXXXXXXXXXXXXXRNDKT-----AAKSALNELRAKR-MRQQDPDGYRSRLRDLTXXXXX 503 + +T AAKSAL+ELRAKR MRQQ P+ SR DL Sbjct: 164 RKDSSPPPPPSRMRSSTRTDKSGSAAKSALDELRAKRTMRQQAPEARTSRFTDLLPHSGS 223 Query: 502 XXXXXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSR 323 P R R A SPPSD SN+G++ GR++ SPSR Sbjct: 224 ---------PTRRR----AGSPPSDGSNDGDNRGRLNDHGRIADDSRDDEFDE---SPSR 267 Query: 322 LDAPKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVD 143 LD KF+DVK IT+RRSKLVKWFMEPFF++LI+GCFVRLGIGKT+SG P+Y+LC+VRNVD Sbjct: 268 LDPLKFDDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGKTKSGNPRYRLCIVRNVD 327 Query: 142 ATDPEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 A+DP++ YKLE Y+TYK+LN +WGS+A AARWQM VSDSPP +EF Sbjct: 328 ASDPDRKYKLESYSTYKYLNVVWGSEADAARWQMTQVSDSPPNEEEF 374 >ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays] gi|223950353|gb|ACN29260.1| unknown [Zea mays] gi|413916604|gb|AFW56536.1| plus-3 domain-containing protein [Zea mays] Length = 650 Score = 276 bits (705), Expect = 9e-72 Identities = 156/288 (54%), Positives = 191/288 (66%), Gaps = 7/288 (2%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE L MSEL RE+ILAER T++DDYKLK+ ARASSSK + Sbjct: 100 DSAPSVGSDLYKDEDDKERLENMSELQRELILAERGTRLDDYKLKQRARASSSKTDKVGA 159 Query: 664 XXXXXXXXXXXXXXRNDKT-----AAKSALNELRAK-RMRQQDPDGYRSRLRDLTXXXXX 503 + +T AAKSAL+ELRAK RMRQQ P+ R+ DL Sbjct: 160 PKDSSPPPPPSRMRSSTRTDKSGSAAKSALDELRAKQRMRQQAPEA--RRITDLL----- 212 Query: 502 XXXXXXXXSPPRHRSIGM-AASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPS 326 P SI A SPPSD SN+G + GR++ SPS Sbjct: 213 ---------PHSGSSIRRRAGSPPSDGSNDGNNRGRMNDHGRIAGDGRDDEFDE---SPS 260 Query: 325 RLDAPKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNV 146 RLD KF+DVK IT+RRSKLVKWFMEPFF++LI+GCFVRLGIGKT++G P Y+LC+VRNV Sbjct: 261 RLDPLKFDDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGKTKNGTPSYRLCIVRNV 320 Query: 145 DATDPEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 DA+DP+++YKLE+Y+T K+LN +W S+A+AARWQM VSDSPP +EF Sbjct: 321 DASDPDRNYKLENYSTCKYLNVVWDSEANAARWQMTQVSDSPPNEEEF 368 >ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown [Zea mays] gi|414878213|tpg|DAA55344.1| TPA: hypothetical protein ZEAMMB73_654453 [Zea mays] Length = 647 Score = 273 bits (699), Expect = 4e-71 Identities = 154/287 (53%), Positives = 189/287 (65%), Gaps = 6/287 (2%) Frame = -3 Query: 844 DSAPSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXX 665 DSAPSVGSDLYKD+ DKE L MSEL REMILA+R T++DDYKLK+ ARASSSK + Sbjct: 97 DSAPSVGSDLYKDEDDKERLENMSELQREMILADRGTRLDDYKLKQRARASSSKTDKVGA 156 Query: 664 XXXXXXXXXXXXXXRNDK-----TAAKSALNELRAK-RMRQQDPDGYRSRLRDLTXXXXX 503 + + +AAKSAL+ELRAK RMRQQ P+ R DL Sbjct: 157 RKDSSPPPPPSRMRSSTRADKSGSAAKSALDELRAKQRMRQQAPEA--RRFTDLLPRSGS 214 Query: 502 XXXXXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSR 323 P R R A SPPSD SN+G+ GR + SPSR Sbjct: 215 ---------PTRRR----AGSPPSDGSNDGDGRGRPNDHGRIADDSRDDEFDE---SPSR 258 Query: 322 LDAPKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVD 143 LD KF+DVK IT+RRSKLVKWFMEPFF++LI+GCFVRLGIG+T++G P+Y+LC+VRNVD Sbjct: 259 LDPLKFDDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGQTKNGTPRYRLCIVRNVD 318 Query: 142 ATDPEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 A+DP+++YKLE Y+T K+LN +W S+A+AARWQM VSDSPP +EF Sbjct: 319 ASDPDRNYKLESYSTCKYLNVVWDSEANAARWQMTQVSDSPPNEEEF 365 >gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica Group] gi|77556035|gb|ABA98831.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica Group] gi|215697432|dbj|BAG91426.1| unnamed protein product [Oryza sativa Japonica Group] Length = 522 Score = 270 bits (690), Expect = 5e-70 Identities = 146/262 (55%), Positives = 177/262 (67%), Gaps = 3/262 (1%) Frame = -3 Query: 778 MSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXXXXXXXXXRN---DKT 608 MSELDREMILAER +IDDYKLK++ARASSS + + D++ Sbjct: 1 MSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARSSARTDRS 60 Query: 607 AAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXSPPRHRSIGMAASPPSD 428 AAKSAL+ELRAKRMRQQDP+GYR+R +DL PPR R A SPPSD Sbjct: 61 AAKSALDELRAKRMRQQDPEGYRNRFKDLIPQSGS---------PPRRR----AGSPPSD 107 Query: 427 NSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFEDVKEITIRRSKLVKWFME 248 SN+G++ GRI E SPSRLD KF+DVK IT+RRSKLVKWFME Sbjct: 108 GSNDGDNRGRITDETRDDEFDE---------SPSRLDPLKFDDVKSITLRRSKLVKWFME 158 Query: 247 PFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKHYKLEHYTTYKWLNCIWGS 68 PFFE+L++GCFVRLGIGK++SG P Y+LC+VRNVDA DP++ YKLE YTT K+LN +W + Sbjct: 159 PFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDANDPDRKYKLEGYTTCKYLNVVWDN 218 Query: 67 DASAARWQMAMVSDSPPLVDEF 2 +A+AARWQM VSDS P +EF Sbjct: 219 EANAARWQMTQVSDSFPSEEEF 240 >ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] Length = 660 Score = 230 bits (587), Expect = 4e-58 Identities = 133/280 (47%), Positives = 170/280 (60%), Gaps = 4/280 (1%) Frame = -3 Query: 829 VGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXX 650 VG DLYKDD D+ +L MSEL REMIL++R++K +D L + RA K + Sbjct: 104 VGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETP 163 Query: 649 XXXXXXXXXRN---DKTAAKS-ALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXX 482 D+ AAK ALNELRAKR++QQDP+ +R +LRD + Sbjct: 164 PLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHR-KLRDASRGNANSRRFSPT 222 Query: 481 XSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFE 302 P +P +S++ ES R S+ + S D P FE Sbjct: 223 KRKP-------FTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFE 275 Query: 301 DVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKH 122 D+KE+TIRRSKL KW MEPFFEELI GCFVR+GIG++RSG P Y+LCLVRNVDAT+P++ Sbjct: 276 DIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSG-PIYRLCLVRNVDATEPDRQ 334 Query: 121 YKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE+ T+K+LN IWG++ASAARWQMAMVSDS PL DE+ Sbjct: 335 YKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEY 374 >ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Glycine max] Length = 656 Score = 229 bits (583), Expect = 1e-57 Identities = 129/280 (46%), Positives = 178/280 (63%), Gaps = 3/280 (1%) Frame = -3 Query: 832 SVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKL--KKMARASSSKMEXXXXXX 659 ++G DLYKD+ D+ +L +M+EL REMIL++R+TK DD L K ++ K+ Sbjct: 102 NIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQS 161 Query: 658 XXXXXXXXXXXXRN-DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXX 482 R+ D++A ALNELRAKR++QQDP+ +R RLR+ + Sbjct: 162 PPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHR-RLREASRNAGSRHFS--- 217 Query: 481 XSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFE 302 PP+ + + S S + +E ES D E L+ S + P F+ Sbjct: 218 --PPKRKPF-TSTSLSSSSHSESESRSHSDDEGSTGDGGIVDSDDDRALAGS--EGPSFQ 272 Query: 301 DVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKH 122 DVKEITIRRSKL KWFMEPFFEELI GCFVR+GIG++++G P Y+LC+V+NVDA++P++ Sbjct: 273 DVKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTG-PIYRLCMVKNVDASEPDRQ 331 Query: 121 YKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE+ TTYK+LN +WG+++SAARWQMAMVSDS PL +EF Sbjct: 332 YKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEF 371 >gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris] Length = 654 Score = 228 bits (580), Expect = 3e-57 Identities = 127/280 (45%), Positives = 178/280 (63%), Gaps = 3/280 (1%) Frame = -3 Query: 832 SVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKL--KKMARASSSKMEXXXXXX 659 ++G DLYKD+ D+ +L +M+EL REMIL++R+TK DD L K ++ K+ Sbjct: 103 NIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQS 162 Query: 658 XXXXXXXXXXXXRN-DKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXX 482 R+ D++A ALNELRAKR++QQDP+ +R +LR+ + Sbjct: 163 PPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHR-KLREASRNAGPRHFS--- 218 Query: 481 XSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFE 302 PP+ + + S S + +E ES D E L+ S + P F+ Sbjct: 219 --PPKRKPF-TSTSLSSSSHSESESRSHSDDEGSTGDGGIGDSDDDRALTGS--EGPSFQ 273 Query: 301 DVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKH 122 D+KEITIRRSKL KWFMEPFFEELI GCFVR+GIG++++G P Y+LC+V+NVDA++P++ Sbjct: 274 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTG-PIYRLCMVKNVDASEPDRQ 332 Query: 121 YKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE+ TTYK+LN +WG+++SAARWQMAMVSDS PL +EF Sbjct: 333 YKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEF 372 >ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine max] Length = 656 Score = 228 bits (580), Expect = 3e-57 Identities = 127/280 (45%), Positives = 176/280 (62%), Gaps = 3/280 (1%) Frame = -3 Query: 832 SVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLK-KMA--RASSSKMEXXXXX 662 ++G DLYKD+ D+ +L +M+EL REMIL++R+TK DD L K+A R Sbjct: 102 NIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQS 161 Query: 661 XXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXX 482 D++A ALNELRAKR++QQDP+ +R RLR+ + Sbjct: 162 PPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHR-RLREASRNAGPRHFS--- 217 Query: 481 XSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFE 302 PP+ ++ + S S + +E ES D E L+ S + P F+ Sbjct: 218 --PPKRKTF-TSTSLSSSSHSESESRSHSDDEGSTGDGGIADSDDDRALAGS--EGPSFQ 272 Query: 301 DVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKH 122 D+KEITIRRSKL KWFMEPFFEELI GCFVR+GIG++++G P Y+LC+V+NVDA++P++ Sbjct: 273 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTG-PIYRLCMVKNVDASEPDRQ 331 Query: 121 YKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE+ TTYK+LN +WG+++SAARWQMAMVSDS P+ +EF Sbjct: 332 YKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPMEEEF 371 >ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Cicer arietinum] gi|502110282|ref|XP_004493843.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Cicer arietinum] Length = 653 Score = 225 bits (574), Expect = 1e-56 Identities = 130/285 (45%), Positives = 179/285 (62%), Gaps = 9/285 (3%) Frame = -3 Query: 829 VGSDLYKDDADKEELGKMSELDREMILAERSTKIDDY--------KLKKMARASSSKMEX 674 VG DLYKD+ D+++L +M+EL REMIL++R++K DD K +K A+A+ S+ E Sbjct: 95 VGDDLYKDEDDRQKLSEMTELQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRES 154 Query: 673 XXXXXXXXXXXXXXXXXRNDKTAAKS-ALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXX 497 D++AAK ALNELRAKR++Q DP+ ++L+ Sbjct: 155 PPPPLLSSRVRASARSA--DRSAAKDGALNELRAKRLKQLDPE---AKLKLKEGSKSGGR 209 Query: 496 XXXXXXSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLD 317 P S G+++S SD+ +S R D E ++ S + Sbjct: 210 GLFSLKGKP-FASTGLSSSSHSDS----DSRSRSDDEGSNGDGGIIDSDDDRIMTGSGFE 264 Query: 316 APKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDAT 137 P FED+KEITIRRSKL KWFMEPFFEELI GCFVR+GIG++++G P Y+LC+V+NVDA+ Sbjct: 265 VPSFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTG-PIYRLCMVKNVDAS 323 Query: 136 DPEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 DP++ YKL++ TTYK+LN +WG++ SAARWQMAMVSDSPPL +EF Sbjct: 324 DPDRQYKLDNKTTYKYLNVVWGNETSAARWQMAMVSDSPPLEEEF 368 >ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Cicer arietinum] Length = 658 Score = 224 bits (571), Expect = 3e-56 Identities = 127/280 (45%), Positives = 177/280 (63%), Gaps = 3/280 (1%) Frame = -3 Query: 832 SVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLK-KMA--RASSSKMEXXXXX 662 ++G DLYKD+ D+ +L +MSEL REMIL++R++K DD L K+A R + Sbjct: 104 NIGDDLYKDEDDRRKLSEMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQS 163 Query: 661 XXXXXXXXXXXXXRNDKTAAKSALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXXXXXX 482 D++A ALNELRAKR++QQDP+ R RLR+ + Sbjct: 164 PPLSSSRMRASARSADRSAKNVALNELRAKRLKQQDPEA-RRRLREASRNSGPRRFS--- 219 Query: 481 XSPPRHRSIGMAASPPSDNSNEGESGGRIDSEXXXXXXXXXXXXXXXDLSPSRLDAPKFE 302 PP+ +S +A+ S + ++ +S D E LS S + P F+ Sbjct: 220 --PPKRKSF-TSANLSSSSHSDSDSRSHSDDEGSTGDGGIADSDDDRALSGS--EGPSFQ 274 Query: 301 DVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCLVRNVDATDPEKH 122 D+KEITIRRSKL KWFMEPFFEELI GCFVR+GIG++++G P Y+LC+V+NVD++DP++ Sbjct: 275 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTG-PIYRLCMVKNVDSSDPDRQ 333 Query: 121 YKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 YKLE+ TT+K+LN +WG+++SAARWQMAMVSDS PL +EF Sbjct: 334 YKLENRTTHKYLNVVWGNESSAARWQMAMVSDSFPLEEEF 373 >gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|508781058|gb|EOY28314.1| PAF1 complex component isoform 1 [Theobroma cacao] Length = 660 Score = 224 bits (570), Expect = 4e-56 Identities = 131/292 (44%), Positives = 177/292 (60%), Gaps = 16/292 (5%) Frame = -3 Query: 829 VGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARA-------SSSKMEXX 671 VG DLYK++ D+ +L +M+EL+RE+IL+ER+ K D K + R+ S S+ E Sbjct: 104 VGDDLYKNEDDRRKLAQMTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETP 163 Query: 670 XXXXXXXXXXXXXXXXRNDKTAAKS-ALNELRAKRMRQQDPDGYRSRLRDLTXXXXXXXX 494 D+ AAK ALNELRAKR++QQDP+ +R +LRD + Sbjct: 164 PLPSSRGVRSSARSA---DRAAAKDDALNELRAKRLKQQDPEAHR-KLRDASRGSSGSRG 219 Query: 493 XXXXXSPPRHRSIGMAASPPSDNSNEGES--------GGRIDSEXXXXXXXXXXXXXXXD 338 P S +++S SD+ + S GG +DS+ Sbjct: 220 LSPVKRKPFTAS-SLSSSSQSDSESRSNSEDEGSTGDGGMVDSDDDRGMQGP-------- 270 Query: 337 LSPSRLDAPKFEDVKEITIRRSKLVKWFMEPFFEELIAGCFVRLGIGKTRSGKPKYKLCL 158 D P F+D+KEITIRRSKL KWFMEPFFEELI GC+VR+GIG+++SG P Y+LC+ Sbjct: 271 ------DGPTFDDIKEITIRRSKLAKWFMEPFFEELIVGCYVRVGIGRSKSG-PIYRLCM 323 Query: 157 VRNVDATDPEKHYKLEHYTTYKWLNCIWGSDASAARWQMAMVSDSPPLVDEF 2 VRNVDAT+PE+ YKLE+ TTYK+LN +WG+++SAARWQMAM+SDSPP +EF Sbjct: 324 VRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARWQMAMISDSPPQEEEF 375