BLASTX nr result
ID: Zingiber24_contig00011192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011192
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [A... 132 6e-29
ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding prote... 130 1e-28
ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding prote... 130 1e-28
ref|XP_006652192.1| PREDICTED: single-stranded DNA-binding prote... 130 1e-28
gb|EEE60820.1| hypothetical protein OsJ_14429 [Oryza sativa Japo... 130 1e-28
ref|XP_004961560.1| PREDICTED: single-stranded DNA-binding prote... 129 3e-28
gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indi... 129 5e-28
ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group] g... 129 5e-28
gb|EMJ08743.1| hypothetical protein PRUPE_ppa017404mg, partial [... 128 9e-28
ref|XP_002319495.2| single-strand-binding family protein [Populu... 127 1e-27
ref|XP_004309381.1| PREDICTED: single-stranded DNA-binding prote... 127 1e-27
ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding prote... 127 2e-27
dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare] 127 2e-27
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho... 125 6e-27
ref|XP_004495682.1| PREDICTED: single-stranded DNA-binding prote... 124 1e-26
gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays] 124 1e-26
gb|ACR34070.1| unknown [Zea mays] gi|238006582|gb|ACR34326.1| un... 124 1e-26
ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Caps... 124 1e-26
gb|ESW16970.1| hypothetical protein PHAVU_007G199200g [Phaseolus... 124 2e-26
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote... 123 2e-26
>ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [Amborella trichopoda]
gi|548862798|gb|ERN20154.1| hypothetical protein
AMTR_s00066p00089800 [Amborella trichopoda]
Length = 255
Score = 132 bits (331), Expect = 6e-29
Identities = 60/75 (80%), Positives = 70/75 (93%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G EHLPRPAQWHRI+VHNEQLGA++VQ+LVKN+SVF+EGDIETRVYND I GQV+NVP
Sbjct: 80 ILGSEHLPRPAQWHRIAVHNEQLGAYAVQQLVKNASVFVEGDIETRVYNDTINGQVRNVP 139
Query: 183 EICVRHDGKIRLIKS 227
EICVR DGK++LIK+
Sbjct: 140 EICVRRDGKLQLIKA 154
>ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 206
Score = 130 bits (328), Expect = 1e-28
Identities = 58/78 (74%), Positives = 72/78 (92%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
++G + LP+PAQWHRI+VHN+QLGAF+VQKLVKNS+V++EGDIETRVYND I QVKN+P
Sbjct: 115 LAGDDTLPKPAQWHRIAVHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDNINDQVKNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRLIKSG++
Sbjct: 175 EICLRRDGKIRLIKSGES 192
>ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 212
Score = 130 bits (328), Expect = 1e-28
Identities = 58/78 (74%), Positives = 72/78 (92%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
++G + LP+PAQWHRI+VHN+QLGAF+VQKLVKNS+V++EGDIETRVYND I QVKN+P
Sbjct: 121 LAGDDTLPKPAQWHRIAVHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDNINDQVKNIP 180
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRLIKSG++
Sbjct: 181 EICLRRDGKIRLIKSGES 198
>ref|XP_006652192.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Oryza brachyantha]
Length = 198
Score = 130 bits (328), Expect = 1e-28
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G E+LP PAQWHRISVHNEQLGA++VQKLVKNS+V++EGDIETRVYND I Q+KN+P
Sbjct: 107 IGGAENLPMPAQWHRISVHNEQLGAYAVQKLVKNSAVYVEGDIETRVYNDRINDQLKNIP 166
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKI LI+SGD+
Sbjct: 167 EICVRRDGKIHLIQSGDS 184
>gb|EEE60820.1| hypothetical protein OsJ_14429 [Oryza sativa Japonica Group]
Length = 245
Score = 130 bits (328), Expect = 1e-28
Identities = 60/76 (78%), Positives = 70/76 (92%)
Frame = +3
Query: 9 GKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVPEI 188
G E+LP PAQWHRISVHNEQLGAF+VQKLVKNS+V++EGDIETRVYND I QVKN+PEI
Sbjct: 156 GAENLPMPAQWHRISVHNEQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEI 215
Query: 189 CVRHDGKIRLIKSGDN 236
CVR DGKI+L++SGD+
Sbjct: 216 CVRRDGKIQLMQSGDS 231
>ref|XP_004961560.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Setaria italica]
gi|514748209|ref|XP_004961561.1| PREDICTED:
single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Setaria italica]
Length = 206
Score = 129 bits (323), Expect(2) = 3e-28
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G E LP+PAQWHRI+VHN++LGA+ VQKLVKNS+V++EGDIETRVYND I QV+N+P
Sbjct: 115 VIGPEDLPKPAQWHRIAVHNDRLGAYVVQKLVKNSAVYVEGDIETRVYNDSINDQVRNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKIRL+KSGD+
Sbjct: 175 EICVRRDGKIRLVKSGDS 192
Score = 21.9 bits (45), Expect(2) = 3e-28
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 241 ANKSYEGLRDGLF 279
AN S +GLR+GLF
Sbjct: 194 ANISLDGLREGLF 206
>gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein
OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 129 bits (323), Expect = 5e-28
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G LP+PAQWHRI++HN+QLGAF+VQKLVKNS+V++EGDIETRVYND I QVKN+P
Sbjct: 154 VVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSINDQVKNIP 213
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRLIKSG++
Sbjct: 214 EICLRRDGKIRLIKSGES 231
>ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA
binding protein [Oryza sativa Japonica Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa
Japonica Group] gi|215706976|dbj|BAG93436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 206
Score = 129 bits (323), Expect = 5e-28
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G LP+PAQWHRI++HN+QLGAF+VQKLVKNS+V++EGDIETRVYND I QVKN+P
Sbjct: 115 VVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSINDQVKNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRLIKSG++
Sbjct: 175 EICLRRDGKIRLIKSGES 192
>gb|EMJ08743.1| hypothetical protein PRUPE_ppa017404mg, partial [Prunus persica]
Length = 202
Score = 128 bits (321), Expect = 9e-28
Identities = 56/78 (71%), Positives = 71/78 (91%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G + LPRPAQWHRI+VHNE LGA++V++L KNSS+++EGDIETRVYND I G+VKN+P
Sbjct: 99 IEGAKDLPRPAQWHRIAVHNEALGAYAVKQLFKNSSIYVEGDIETRVYNDSINGEVKNIP 158
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR+DGKIRLIK+G++
Sbjct: 159 EICVRYDGKIRLIKTGES 176
>ref|XP_002319495.2| single-strand-binding family protein [Populus trichocarpa]
gi|550324675|gb|EEE95418.2| single-strand-binding family
protein [Populus trichocarpa]
Length = 215
Score = 127 bits (319), Expect(2) = 1e-27
Identities = 56/78 (71%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G + LP+PAQWHRI+VHN+ LGA++VQ+L KNSSV++EGDIE RVYND I+G+VKN+P
Sbjct: 123 IIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLTKNSSVYVEGDIEIRVYNDSISGEVKNIP 182
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKIRLI+SG+N
Sbjct: 183 EICVRRDGKIRLIRSGEN 200
Score = 21.6 bits (44), Expect(2) = 1e-27
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 238 LANKSYEGLRDGLF 279
++N S+E LR+GLF
Sbjct: 201 ISNISFEDLREGLF 214
>ref|XP_004309381.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 214
Score = 127 bits (320), Expect = 1e-27
Identities = 54/75 (72%), Positives = 71/75 (94%)
Frame = +3
Query: 12 KEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVPEIC 191
++ LP+PAQWHRI+VHN++LGA++V++ VKNSSV++EGDIETRVYND ITG+V N+PEIC
Sbjct: 126 RKDLPKPAQWHRIAVHNDRLGAYAVKQFVKNSSVYVEGDIETRVYNDSITGEVNNIPEIC 185
Query: 192 VRHDGKIRLIKSGDN 236
+RHDGKIRLIKSG++
Sbjct: 186 IRHDGKIRLIKSGES 200
>ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 127 bits (319), Expect = 2e-27
Identities = 56/72 (77%), Positives = 68/72 (94%)
Frame = +3
Query: 21 LPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVPEICVRH 200
+P+PAQWHRI+VHNEQLGA++VQKLVKNS+V+IEGDIETRVYND I QVKN+PEIC+R
Sbjct: 120 VPKPAQWHRIAVHNEQLGAYAVQKLVKNSAVYIEGDIETRVYNDSINDQVKNIPEICIRR 179
Query: 201 DGKIRLIKSGDN 236
DGKIRL+KSG++
Sbjct: 180 DGKIRLVKSGES 191
>dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 127 bits (318), Expect = 2e-27
Identities = 55/78 (70%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G P+PAQWHRI+VH+E LGA++VQKLVKNS+V+IEGDIETR+YNDGI GQV+N+P
Sbjct: 115 VIGSADTPKPAQWHRIAVHSEHLGAYAVQKLVKNSAVYIEGDIETRIYNDGIDGQVRNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRL+KSG++
Sbjct: 175 EICIRGDGKIRLVKSGES 192
>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
Single-stranded DNA-binding protein, mitochondrial
precursor, putative [Ricinus communis]
Length = 213
Score = 125 bits (314), Expect = 6e-27
Identities = 55/78 (70%), Positives = 69/78 (88%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G + LP+PAQWHRI+VHNE LGA++VQ+L KNSSV++EG+IETRVYND I+G+VKN+P
Sbjct: 122 IVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKNIP 181
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DGKIRL+ SG N
Sbjct: 182 EICIRRDGKIRLVTSGKN 199
>ref|XP_004495682.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cicer arietinum]
Length = 213
Score = 124 bits (312), Expect = 1e-26
Identities = 55/78 (70%), Positives = 70/78 (89%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I G + LP+PAQWHR++VHNE LGA++VQ+L KNSSV++EG+IETRVYND I G+VK++P
Sbjct: 122 IVGSKDLPKPAQWHRVAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGEVKSIP 181
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKIRLIKSG++
Sbjct: 182 EICVRRDGKIRLIKSGES 199
>gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 223
Score = 124 bits (312), Expect = 1e-26
Identities = 54/78 (69%), Positives = 69/78 (88%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G + LP+PAQWHRI+VHN+ L A++VQKLVKNS+V++EGDIETRVYND + QVKN+P
Sbjct: 115 VIGPKDLPKPAQWHRIAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKI+L+KSGD+
Sbjct: 175 EICVRRDGKIQLVKSGDS 192
>gb|ACR34070.1| unknown [Zea mays] gi|238006582|gb|ACR34326.1| unknown [Zea mays]
gi|413945982|gb|AFW78631.1| hypothetical protein
ZEAMMB73_663564 [Zea mays] gi|413945983|gb|AFW78632.1|
hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 206
Score = 124 bits (312), Expect = 1e-26
Identities = 54/78 (69%), Positives = 69/78 (88%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
+ G + LP+PAQWHRI+VHN+ L A++VQKLVKNS+V++EGDIETRVYND + QVKN+P
Sbjct: 115 VIGPKDLPKPAQWHRIAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIP 174
Query: 183 EICVRHDGKIRLIKSGDN 236
EICVR DGKI+L+KSGD+
Sbjct: 175 EICVRRDGKIQLVKSGDS 192
>ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Capsella rubella]
gi|482557391|gb|EOA21583.1| hypothetical protein
CARUB_v10001995mg [Capsella rubella]
Length = 202
Score = 124 bits (311), Expect = 1e-26
Identities = 54/76 (71%), Positives = 69/76 (90%)
Frame = +3
Query: 9 GKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVPEI 188
G + P+PAQWHRI+VHNE LG+++VQK+ KNSSV++EGDIETRVYND I+G+VK++PEI
Sbjct: 113 GATNQPKPAQWHRIAVHNEVLGSYAVQKIAKNSSVYVEGDIETRVYNDSISGEVKSIPEI 172
Query: 189 CVRHDGKIRLIKSGDN 236
CVRHDGKIRLIK G++
Sbjct: 173 CVRHDGKIRLIKYGES 188
>gb|ESW16970.1| hypothetical protein PHAVU_007G199200g [Phaseolus vulgaris]
gi|561018167|gb|ESW16971.1| hypothetical protein
PHAVU_007G199200g [Phaseolus vulgaris]
Length = 216
Score = 124 bits (310), Expect = 2e-26
Identities = 55/76 (72%), Positives = 68/76 (89%)
Frame = +3
Query: 9 GKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVPEI 188
G + LP+PAQWHRI+VHN+ LGA++VQKL KN SV+IEGDIETRVYND I G+VK++PEI
Sbjct: 127 GPKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNCSVYIEGDIETRVYNDSINGEVKSIPEI 186
Query: 189 CVRHDGKIRLIKSGDN 236
CVR DG+IRLIKSG++
Sbjct: 187 CVRRDGRIRLIKSGES 202
>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
protein product [Vitis vinifera]
Length = 208
Score = 123 bits (309), Expect = 2e-26
Identities = 56/78 (71%), Positives = 71/78 (91%)
Frame = +3
Query: 3 ISGKEHLPRPAQWHRISVHNEQLGAFSVQKLVKNSSVFIEGDIETRVYNDGITGQVKNVP 182
I GK+ LP+PAQWHRI+VHNE LGA++VQ+LVKNSSV++EGDIE RVYND I G+VK+VP
Sbjct: 117 IGGKD-LPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVKHVP 175
Query: 183 EICVRHDGKIRLIKSGDN 236
EIC+R DG+IRLIK+G++
Sbjct: 176 EICIRRDGRIRLIKTGES 193