BLASTX nr result
ID: Zingiber24_contig00011168
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011168
(1183 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indi... 84 1e-13
gb|AFW68959.1| U1 snRNP [Zea mays] 74 2e-10
gb|AAT64945.1| U1 snRNP [Zea mays] gi|49343276|gb|AAT64946.1| U1... 74 2e-10
gb|EMT24374.1| U1 small nuclear ribonucleoprotein 70 kDa [Aegilo... 70 2e-09
gb|EMS55470.1| U1 small nuclear ribonucleoprotein 70 kDa [Tritic... 70 2e-09
gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aes... 70 2e-09
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei... 69 3e-09
ref|XP_004983436.1| PREDICTED: U1 small nuclear ribonucleoprotei... 69 4e-09
ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [S... 68 6e-09
ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotei... 66 2e-08
ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [S... 65 5e-08
ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A... 64 2e-07
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei... 64 2e-07
ref|XP_006590685.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-07
ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-07
gb|ESW28925.1| hypothetical protein PHAVU_002G029300g [Phaseolus... 62 5e-07
ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-07
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense] 62 5e-07
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-07
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-07
>gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 84.0 bits (206), Expect = 1e-13
Identities = 84/305 (27%), Positives = 106/305 (34%), Gaps = 12/305 (3%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEPX 180
DNRRVLVDVERGRTVPNWRP QK S R+QQ + RSEEP
Sbjct: 219 DNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQH--AGRPRSEEPR 276
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXTRE----------PREDRHHHQXXXXXXXXXXXXX 330
TRE +EDRHHH+
Sbjct: 277 RDERRADRDREKSRERPRERDRDERTRERSHDRTRERDSKEDRHHHRDRDRTRDRERGRD 336
Query: 331 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDQAGYERE 510
Y++A +ER+
Sbjct: 337 RERDHGRDRDRDRERDRRDRDRDRDRGRDYERDRDRGHDRHRERGRDRERDYERASHERD 396
Query: 511 RGYFHDKDSEYGN-ESKHGRERSGARDRNIEHGNGQEWYDGLRNPEHERDYNQYDESQGQ 687
RG+ H++D+EY N E KH R +G YD E YN Y++ +
Sbjct: 397 RGHVHERDAEYANGEPKHDRNLAG--------------YD------QEYGYN-YEQHKSH 435
Query: 688 KQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYADADQREEGEAVGD- 864
Y+ ERSKRHE +YY Q QP+ + + EEGEA +
Sbjct: 436 DAYE----------TERSKRHEHEYY------QMQPN-------NTEPEGPEEGEAYDEG 472
Query: 865 DYGYH 879
DY YH
Sbjct: 473 DYQYH 477
>gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 73.6 bits (179), Expect = 2e-10
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Frame = +1
Query: 502 ERERGYFHDKDSEYGNE--------SKHGRERSGARDRNIEHGNGQEWYD-GLRNPEHER 654
ER+RG HD+ E G + + H R+R +R+ ++GNG +D L + +
Sbjct: 349 ERDRGRSHDRHRERGRDRGERDYERTSHERDRGHMHERDADYGNGGTKHDKNLSSYGQDY 408
Query: 655 DYNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYADAD 834
Y QY++ +G Y + V+ E E SKRHE +YY SY + + + YQ A+ +
Sbjct: 409 GYGQYEQHKGHDAYGYSQDVRGHE-TEHSKRHEHEYYRVDSYGKMEAN-YQMPPNNAEPE 466
Query: 835 QREEGEAVGD-DYGYHPSGRSL 897
EEGEA + DY YH SG +
Sbjct: 467 GPEEGEAYEEGDYQYHRSGEHM 488
>gb|AAT64945.1| U1 snRNP [Zea mays] gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 73.6 bits (179), Expect = 2e-10
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Frame = +1
Query: 502 ERERGYFHDKDSEYGNE--------SKHGRERSGARDRNIEHGNGQEWYD-GLRNPEHER 654
ER+RG HD+ E G + + H R+R +R+ ++GNG +D L + +
Sbjct: 349 ERDRGRSHDRHRERGRDRGERDYERTSHERDRGHMHERDADYGNGGTKHDKNLSSYGQDY 408
Query: 655 DYNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYADAD 834
Y QY++ +G Y + V+ E E SKRHE +YY SY + + + YQ A+ +
Sbjct: 409 GYGQYEQHKGHDAYGYSQDVRGHE-TEHSKRHEHEYYRVDSYGKMEAN-YQMPPNNAEPE 466
Query: 835 QREEGEAVGD-DYGYHPSGRSL 897
EEGEA + DY YH SG +
Sbjct: 467 GPEEGEAYEEGDYQYHRSGEHM 488
>gb|EMT24374.1| U1 small nuclear ribonucleoprotein 70 kDa [Aegilops tauschii]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09
Identities = 44/107 (41%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEPX 180
DN+RVLVDVERGRTVPNWRP AQKHS REQQ + RSEEP
Sbjct: 205 DNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGEDAAQKHSAREQQN-AAGRPRSEEPR 263
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXTRE----------PREDRHHHQ 291
TRE PREDRHHH+
Sbjct: 264 RDDRPADRDREKSRDRVRERDRDEKTRERSHDRTRDRDPREDRHHHR 310
>gb|EMS55470.1| U1 small nuclear ribonucleoprotein 70 kDa [Triticum urartu]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09
Identities = 44/107 (41%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEPX 180
DN+RVLVDVERGRTVPNWRP AQKHS REQQ + RSEEP
Sbjct: 205 DNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGEDAAQKHSAREQQN-AAGRPRSEEPR 263
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXTRE----------PREDRHHHQ 291
TRE PREDRHHH+
Sbjct: 264 RDDRPADRDREKSRDRVRERDRDEKTRERSHDRTRDRDPREDRHHHR 310
>gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09
Identities = 44/107 (41%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEPX 180
DN+RVLVDVERGRTVPNWRP AQKHS REQQ + RSEEP
Sbjct: 205 DNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGEDAAQKHSAREQQN-AAGRPRSEEPR 263
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXTRE----------PREDRHHHQ 291
TRE PREDRHHH+
Sbjct: 264 RDDRSADRDREKSRDRVRERDRDEKTRERSHDRARDRDPREDRHHHR 310
>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 69.3 bits (168), Expect = 3e-09
Identities = 53/151 (35%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Frame = +1
Query: 484 YDQAGYERERGYFHDKDSEYGNESKHGRERSGARDRNIEHGNGQE---WYD----GLRNP 642
YD +RG DK+ ESKH RER G RDR++EH ++ WY+ G R P
Sbjct: 369 YDAGEPNYDRGRSRDKEYYDHMESKHERERHGERDRDLEHAGPEDDHGWYEQPEHGHRRP 428
Query: 643 EHERD---YNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQ 813
E E D Y YD Q + QYDH + +R ++ D Y+Q D Y
Sbjct: 429 EAEHDDEHYKHYDH-QARGQYDHLDAQGDHDLYDRHADNDRD-----RYNQMDEDNY--H 480
Query: 814 YEYADADQREEGEAVGDDYGYHPSGRSLSRE 906
Y++A D RE + Y S RSLSR+
Sbjct: 481 YDHAAYDSRERDRTRDLEREYRRSERSLSRD 511
>ref|XP_004983436.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Setaria
italica]
Length = 491
Score = 68.9 bits (167), Expect = 4e-09
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Frame = +1
Query: 499 YERE--RGYFHDKDSEYGNE--------SKHGRERSGARDRNIEHGNGQEWYD-GLRNPE 645
YERE R HD+ E G + + H R+R +R+ ++GNG +D L +
Sbjct: 346 YERETDRARSHDRHRERGRDRGERDYERTSHERDRGHRHERDADYGNGGPKHDKNLSSYG 405
Query: 646 HERDYNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYA 825
+ Y QY++ +G + Y + + E E SKRH+ +YY SY + + + YQ Q A
Sbjct: 406 QDYGYGQYEQHKGHEAYGYGQDGRGHE-TEHSKRHDQEYYRVDSYSKMETN-YQVQPNNA 463
Query: 826 DADQREEGEAVGD-DYGYHPSGRSLS 900
+ + EEGEA + DY YH +G ++
Sbjct: 464 EPEGPEEGEAYEEGDYQYHRAGEHMN 489
>ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein
SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 68.2 bits (165), Expect = 6e-09
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +1
Query: 499 YERERGYFHDKDSEYGN-ESKHGRERSGARDRNIEHGNGQEWYDGLRNPEHERDYNQYDE 675
+ERERG+ H++D++YGN +KH D+N+ GQ++ Y QY++
Sbjct: 373 HERERGHMHERDADYGNGGTKH--------DKNLS-SYGQDY-----------GYGQYEQ 412
Query: 676 SQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYADADQREEGEA 855
+G Y + + E E SKRHE +YY SY + + + YQ Q A+ + EEGEA
Sbjct: 413 HKGHDAYGYGQDGRRHE-TEHSKRHEHEYYRVDSYGKMEAN-YQMQPNNAEPEGPEEGEA 470
Query: 856 VGD-DYGYHPSGRS 894
+ DY YH +G S
Sbjct: 471 YEEGDYQYHQAGES 484
>ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 66.2 bits (160), Expect = 2e-08
Identities = 41/107 (38%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEPX 180
DN+RVLVDVERGRTVPNWRP +QKHS REQQ + RSEEP
Sbjct: 205 DNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGEDASQKHSAREQQN-AAGRPRSEEPR 263
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXTRE----------PREDRHHHQ 291
TRE PRE++HHH+
Sbjct: 264 RDDRPADRDREKSRERVRERDRDERTRERSHDRTRDRDPREEKHHHR 310
>ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein
SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 65.1 bits (157), Expect = 5e-08
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Frame = +1
Query: 502 ERERGYFHDKDSEYGNE--------SKHGRERSGARDRNIEHGNGQEWYD-GLRNPEHER 654
ER+R HD+ E G + + H R+R +R+ ++GNG +D L + +
Sbjct: 349 ERDRARSHDRHRERGRDRGERDYERTSHERDRGHMHERDADYGNGGTKHDKNLSSYGQDY 408
Query: 655 DYNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEYADAD 834
Y QY++ +G Y + + E E SKRHE +YY + YQ Q A+ +
Sbjct: 409 GYGQYEQHKGHDAYGYGQDGRGHE-TEHSKRHEHEYYRESN--------YQTQPNNAEPE 459
Query: 835 QREEGEAVGD-DYGYHPSGRSLS 900
EEGEA + DY YH +G ++
Sbjct: 460 GPEEGEAYEEGDYQYHRAGEHMN 482
>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
gi|548859890|gb|ERN17498.1| hypothetical protein
AMTR_s00059p00067090 [Amborella trichopoda]
Length = 458
Score = 63.5 bits (153), Expect = 2e-07
Identities = 35/59 (59%), Positives = 36/59 (61%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
DNRRVLVDVERGRTVPNWRP QK+SGRE QQ T SRSEEP
Sbjct: 205 DNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPQQATGG-SRSEEP 262
>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07
Identities = 34/59 (57%), Positives = 37/59 (62%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP +Q+HSGREQQQ + SRSEEP
Sbjct: 205 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQ-SGAPSRSEEP 262
Score = 62.4 bits (150), Expect = 3e-07
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Frame = +1
Query: 490 QAGY-ERERGYFHDKDSEYGNESKHGRERSGARDRNIEHG---NGQEWYD----GLRNPE 645
+ GY + +RG HD+D ESK+ ++R G RDR+++ +G+ WYD G R+ +
Sbjct: 372 EGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDVDRAETEDGRGWYDQPEHGHRDAD 431
Query: 646 HE-RDYNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYEY 822
H+ + Y+ ++ ++G+ QYD P + D Y+ YD R D Y YE
Sbjct: 432 HDPQYYDHFEHNRGRGQYDQP-----------EGHRDQDRYD--QYDDRMDDDY--HYER 476
Query: 823 ADADQREEGEAVGDDYGYHPSGRSLSRE 906
+++ + + ++ Y S RS SRE
Sbjct: 477 GNSESHDRERSRDLNHEYKRSERSHSRE 504
>ref|XP_006590685.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Glycine max]
Length = 485
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 35/59 (59%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP Q+HSGREQQQ SRSEEP
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ-----SRSEEP 261
>ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Glycine max]
Length = 479
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 35/59 (59%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP Q+HSGREQQQ SRSEEP
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ-----SRSEEP 261
>gb|ESW28925.1| hypothetical protein PHAVU_002G029300g [Phaseolus vulgaris]
Length = 478
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 35/59 (59%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP Q+HSGREQQQ SRSEEP
Sbjct: 210 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ-----SRSEEP 263
>ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cicer
arietinum]
Length = 510
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
+ RRVLVDVERGRTVPNWRP Q+HSGREQQQ S SRSEEP
Sbjct: 208 EGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ--SGPSRSEEP 264
>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
+ RRVLVDVERGRTVPNWRP Q+HSGREQQQ S SRSEEP
Sbjct: 206 EGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ--SGPSRSEEP 262
>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoformX1
[Glycine max]
Length = 482
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 35/59 (59%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP Q+HSGREQQQ SRSEEP
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ-----SRSEEP 261
>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Glycine max]
Length = 481
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/59 (57%), Positives = 35/59 (59%)
Frame = +1
Query: 1 DNRRVLVDVERGRTVPNWRPXXXXXXXXXXXXXXXXXAQKHSGREQQQLTSDHSRSEEP 177
D RRVLVDVERGRTVPNWRP Q+HSGREQQQ SRSEEP
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ-----SRSEEP 261