BLASTX nr result

ID: Zingiber24_contig00011144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00011144
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04361.1| predicted protein [Hordeum vulgare subsp. vulgare]     49   2e-09
ref|XP_003567292.1| PREDICTED: uncharacterized protein LOC100834...    44   3e-07
dbj|BAJ94035.1| predicted protein [Hordeum vulgare subsp. vulgare]     39   6e-06

>dbj|BAK04361.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 374

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 20/41 (48%), Positives = 33/41 (80%)
 Frame = +3

Query: 207 PILYATIYEGVPEEGRTAVALRMHSSACDRASVGAVLKELV 329
           P+L+A +Y+  P  G TA+ +R+H++ACDRA+ GA+L+EL+
Sbjct: 121 PVLFAALYDLPPPSGGTALFVRIHTAACDRAASGALLRELL 161



 Score = 38.5 bits (88), Expect(2) = 2e-09
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +1

Query: 4   ESAVRSLQSTHPILRAFLSAPTPGQPTLTVAS 99
           E+AVRSLQS HP+LRA + A +   PTL   S
Sbjct: 51  EAAVRSLQSAHPVLRAHIRAASASSPTLAFPS 82


>ref|XP_003567292.1| PREDICTED: uncharacterized protein LOC100834188 [Brachypodium
           distachyon]
          Length = 469

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 19/43 (44%), Positives = 30/43 (69%)
 Frame = +3

Query: 201 ADPILYATIYEGVPEEGRTAVALRMHSSACDRASVGAVLKELV 329
           A P+L+A +YE  P  G  A+ +R+H+ ACDRA+  A+ +EL+
Sbjct: 129 AAPVLFAALYELPPPAGGVALLVRIHTVACDRAASAALARELI 171



 Score = 35.8 bits (81), Expect(2) = 3e-07
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   LESAVRSLQSTHPILRAFLSA-PTPGQPTLTVASAPS 108
           L++AVRSLQ  HPILRA L A P+ G  TL   ++ S
Sbjct: 52  LQAAVRSLQKAHPILRAHLRASPSGGAATLAFPASSS 88


>dbj|BAJ94035.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 478

 Score = 38.9 bits (89), Expect(2) = 6e-06
 Identities = 16/41 (39%), Positives = 28/41 (68%)
 Frame = +3

Query: 207 PILYATIYEGVPEEGRTAVALRMHSSACDRASVGAVLKELV 329
           P+L+A +Y+  P  G  A+ + +H++ CDRA+  A+L EL+
Sbjct: 143 PVLFAALYQLPPPAGGAALFILIHTAVCDRAASEALLSELL 183



 Score = 36.6 bits (83), Expect(2) = 6e-06
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = +1

Query: 4   ESAVRSLQSTHPILRAFLSAPTPGQPTLTV-ASAPSATV 117
           E+AVR+LQ+ HP+LRA L   TP  PTL   +SAP  ++
Sbjct: 73  EAAVRALQNAHPVLRAHLRG-TPSSPTLAFPSSAPQLSL 110


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