BLASTX nr result

ID: Zingiber24_contig00011108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00011108
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera...    57   3e-06

>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Solanum tuberosum]
          Length = 348

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 407 NAKKQRTIQVMDIHEIPKPKNSFV--RKGVFHGKH 309
           NAKKQRTIQVMDIHEIPKPKN F+   KG F G+H
Sbjct: 312 NAKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQGRH 346


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