BLASTX nr result
ID: Zingiber24_contig00011080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011080
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001063296.1| Os09g0443500 [Oryza sativa Japonica Group] g... 164 1e-38
gb|EOY30294.1| TATA-binding related factor (TRF) of subunit 20 o... 164 1e-38
gb|EEC84654.1| hypothetical protein OsI_31548 [Oryza sativa Indi... 162 6e-38
ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab... 161 1e-37
ref|XP_006419016.1| hypothetical protein EUTSA_v10002659mg [Eutr... 160 2e-37
dbj|BAJ99746.1| predicted protein [Hordeum vulgare subsp. vulgar... 158 8e-37
gb|EMT27084.1| hypothetical protein F775_15996 [Aegilops tauschii] 156 2e-36
ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|5... 156 2e-36
gb|EMJ03746.1| hypothetical protein PRUPE_ppa011158mg [Prunus pe... 156 3e-36
ref|NP_001144139.1| uncharacterized protein LOC100276988 [Zea ma... 155 4e-36
ref|NP_180390.2| mediator of RNA polymerase II transcription sub... 155 4e-36
ref|XP_006293516.1| hypothetical protein CARUB_v10024033mg [Caps... 155 5e-36
gb|EMS63764.1| Putative mediator of RNA polymerase II transcript... 154 9e-36
ref|XP_004956948.1| PREDICTED: mediator of RNA polymerase II tra... 154 1e-35
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra... 153 2e-35
emb|CBI27822.3| unnamed protein product [Vitis vinifera] 153 2e-35
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera... 153 2e-35
ref|XP_003578193.1| PREDICTED: putative mediator of RNA polymera... 152 3e-35
ref|XP_006480516.1| PREDICTED: mediator of RNA polymerase II tra... 151 1e-34
ref|XP_006428624.1| hypothetical protein CICLE_v10012695mg [Citr... 151 1e-34
>ref|NP_001063296.1| Os09g0443500 [Oryza sativa Japonica Group]
gi|51536008|dbj|BAD38088.1| unknown protein [Oryza
sativa Japonica Group] gi|113631529|dbj|BAF25210.1|
Os09g0443500 [Oryza sativa Japonica Group]
gi|215693210|dbj|BAG88592.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222641676|gb|EEE69808.1| hypothetical protein
OsJ_29541 [Oryza sativa Japonica Group]
Length = 230
Score = 164 bits (415), Expect = 1e-38
Identities = 79/132 (59%), Positives = 98/132 (74%), Gaps = 10/132 (7%)
Frame = +1
Query: 16 VKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPVS- 192
VKWLMHW PNQG+TL+SQ+LAE C C E G + KD +W+T++ FYR MARD A+A +
Sbjct: 4 VKWLMHWHPNQGATLNSQILAEACACAESLGGS-KDGRWKTSIIFYRAMARDGASAAAAG 62
Query: 193 ---------DVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVL 345
DVPR+LLG+ALH+RP YF ILR HR++LQAD+ +M+KLQSYKARV L
Sbjct: 63 GGGPPQQHPDVPRELLGVALHERPGLYFSILRAHRLVLQADSAFPQVMEKLQSYKARVTL 122
Query: 346 HFEGSQYQLGDF 381
+FEG QYQLGDF
Sbjct: 123 NFEGFQYQLGDF 134
>gb|EOY30294.1| TATA-binding related factor (TRF) of subunit 20 of Mediator complex
[Theobroma cacao]
Length = 222
Score = 164 bits (414), Expect = 1e-38
Identities = 75/125 (60%), Positives = 102/125 (81%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW+++WQPN GST++SQ+L EV QCVE K+ +W+ TLTFY+PM RD A A
Sbjct: 1 MPLKWVLNWQPNAGSTVNSQILNEVSQCVESINGV-KEGRWKATLTFYKPMLRDQALA-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
+D PRD LGI+L ++P+ Y+FILR H+I+L+AD+++QL+M+KLQSYK+RV L+FEG QYQ
Sbjct: 58 ADFPRDFLGISLPEQPNKYYFILRGHKIVLEADSSIQLIMEKLQSYKSRVALNFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122
>gb|EEC84654.1| hypothetical protein OsI_31548 [Oryza sativa Indica Group]
Length = 230
Score = 162 bits (409), Expect = 6e-38
Identities = 78/132 (59%), Positives = 97/132 (73%), Gaps = 10/132 (7%)
Frame = +1
Query: 16 VKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPVS- 192
VKWLMHW PN G+TL+SQ+LAE C C E G + KD +W+T++ FYR MARD A+A +
Sbjct: 4 VKWLMHWHPNPGATLNSQILAEACACAESLGGS-KDGRWKTSIIFYRAMARDGASAAAAG 62
Query: 193 ---------DVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVL 345
DVPR+LLG+ALH+RP YF ILR HR++LQAD+ +M+KLQSYKARV L
Sbjct: 63 GGGPPQQHPDVPRELLGVALHERPGLYFSILRAHRLVLQADSAFPQVMEKLQSYKARVTL 122
Query: 346 HFEGSQYQLGDF 381
+FEG QYQLGDF
Sbjct: 123 NFEGFQYQLGDF 134
>ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp.
lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein
ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata]
Length = 219
Score = 161 bits (407), Expect = 1e-37
Identities = 73/125 (58%), Positives = 100/125 (80%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MPVKW++HWQPNQGST+SSQ+L EV QCVE K+ +W+ TL +Y+PM RD A
Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEVTQCVESINGV-KEGRWKATLNYYKPMLRDQANQ-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
S+ PRD LGI+L D+P+ Y+FI+R RI+L+AD+++QL+M+KLQSYK++V L+F+G QYQ
Sbjct: 58 SEFPRDFLGISLADQPNKYYFIIRSQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQ 117
Query: 370 LGDFQ 384
LGDF+
Sbjct: 118 LGDFR 122
>ref|XP_006419016.1| hypothetical protein EUTSA_v10002659mg [Eutrema salsugineum]
gi|557096944|gb|ESQ37452.1| hypothetical protein
EUTSA_v10002659mg [Eutrema salsugineum]
Length = 219
Score = 160 bits (405), Expect = 2e-37
Identities = 73/125 (58%), Positives = 99/125 (79%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MPVKW+++WQPNQGST+SSQ+L E QCVE K+ +W+ TL +Y+PM RD A
Sbjct: 1 MPVKWVLYWQPNQGSTVSSQILNEATQCVESINGV-KEGRWKATLNYYKPMVRDQANQ-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
+D PRD LGI+L D+PS Y+FI+R RI+L+AD+++QL+M+KLQSYK++V L+FEG QYQ
Sbjct: 58 ADFPRDFLGISLADQPSKYYFIIRSQRIVLEADSSIQLIMEKLQSYKSKVALYFEGFQYQ 117
Query: 370 LGDFQ 384
LGDF+
Sbjct: 118 LGDFR 122
>dbj|BAJ99746.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528331|dbj|BAJ93347.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 223
Score = 158 bits (399), Expect = 8e-37
Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +1
Query: 13 PVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAP-- 186
P KWLMHW PN G TL++Q+L+E C C E G KD +W+T++ FYRPM RD A
Sbjct: 3 PAKWLMHWHPNPGVTLNTQILSEACGCAESLGGT-KDGRWKTSIIFYRPMTRDGAGGAQQ 61
Query: 187 --VSDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGS 360
++DVPR+LLG+ALH+RP YF ILR+ R++LQADA +M+KLQS+KARV L+FEG
Sbjct: 62 NQLADVPRELLGVALHERPGLYFSILRNQRLVLQADAAFSQVMEKLQSFKARVNLNFEGF 121
Query: 361 QYQLGDF 381
QYQLGDF
Sbjct: 122 QYQLGDF 128
>gb|EMT27084.1| hypothetical protein F775_15996 [Aegilops tauschii]
Length = 301
Score = 156 bits (395), Expect = 2e-36
Identities = 74/127 (58%), Positives = 92/127 (72%), Gaps = 4/127 (3%)
Frame = +1
Query: 13 PVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPVS 192
P KWLMHW PN G TL++Q+L+E C C E G KD +W+T++ FYRPM RD A
Sbjct: 3 PAKWLMHWHPNPGVTLNTQILSEACGCAESLGGT-KDGRWKTSIIFYRPMTRDGAGGAQQ 61
Query: 193 ----DVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGS 360
DVPR+LLG+ALH+RP YF ILR+ R++LQADA +M+KLQS+KARV L+FEG
Sbjct: 62 NLPPDVPRELLGVALHERPGLYFSILRNQRLVLQADAAFSQVMEKLQSFKARVNLNFEGF 121
Query: 361 QYQLGDF 381
QYQLGDF
Sbjct: 122 QYQLGDF 128
>ref|XP_002326280.1| predicted protein [Populus trichocarpa]
gi|566176431|ref|XP_006381641.1| hypothetical protein
POPTR_0006s14580g [Populus trichocarpa]
gi|550336349|gb|ERP59438.1| hypothetical protein
POPTR_0006s14580g [Populus trichocarpa]
Length = 221
Score = 156 bits (395), Expect = 2e-36
Identities = 68/125 (54%), Positives = 101/125 (80%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW++HWQPN G+T+++Q+L EV QCVE K+ +W+ T+T+Y+P+ RD + AP
Sbjct: 1 MPLKWVLHWQPNAGTTVNTQILNEVTQCVESINGV-KEGRWKATVTYYKPILRDQSQAP- 58
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
++PRD LGI+L ++P+ Y+FI+R RI+L+AD+++Q +M+KLQSYK+RV L+FEG QYQ
Sbjct: 59 -ELPRDFLGISLPEQPNKYYFIIRGQRIVLEADSSIQTIMEKLQSYKSRVALYFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122
>gb|EMJ03746.1| hypothetical protein PRUPE_ppa011158mg [Prunus persica]
Length = 221
Score = 156 bits (394), Expect = 3e-36
Identities = 70/125 (56%), Positives = 99/125 (79%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW++HWQPN G+T++SQ++ EV QCVE K+ +W+ T+TFY+PM R+ A A
Sbjct: 1 MPLKWVLHWQPNAGTTVNSQIINEVTQCVESINGV-KEGRWKATITFYKPMIREQALA-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
D PRD LGIAL ++P+ Y+ I+R RI+L+AD+++Q++M+KLQSYK+RV L+FEG QYQ
Sbjct: 58 GDFPRDFLGIALPEQPNKYYLIIRLQRIVLEADSSIQMIMEKLQSYKSRVSLNFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122
>ref|NP_001144139.1| uncharacterized protein LOC100276988 [Zea mays]
gi|195637436|gb|ACG38186.1| hypothetical protein [Zea
mays] gi|224032871|gb|ACN35511.1| unknown [Zea mays]
Length = 225
Score = 155 bits (393), Expect = 4e-36
Identities = 73/127 (57%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Frame = +1
Query: 13 PVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV- 189
PVKWLMHW P+ G+TL+SQ+LAE C C E G + KD +W+T++ FYR M RD A P
Sbjct: 3 PVKWLMHWHPSPGATLNSQILAEACGCAESLGGS-KDGRWKTSIFFYRAMTRDGAGGPAV 61
Query: 190 ---SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGS 360
D+PR+LLG+ALH+RP YF I+R R++LQADA +M+KLQSY+ RV L+FEG
Sbjct: 62 QQHPDLPRELLGVALHERPGLYFSIVRAQRLVLQADAAFPQVMEKLQSYRIRVALNFEGF 121
Query: 361 QYQLGDF 381
QYQLGDF
Sbjct: 122 QYQLGDF 128
>ref|NP_180390.2| mediator of RNA polymerase II transcription subunit 20a
[Arabidopsis thaliana]
gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis
thaliana] gi|38604010|gb|AAR24748.1| At2g28230
[Arabidopsis thaliana] gi|330252999|gb|AEC08093.1|
mediator of RNA polymerase II transcription subunit 20a
[Arabidopsis thaliana]
Length = 219
Score = 155 bits (393), Expect = 4e-36
Identities = 70/125 (56%), Positives = 98/125 (78%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MPVKW++HWQPNQGST+SSQ+L E QCVE K+ +W+ TL +Y+PM +D A
Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEATQCVESINGV-KEGRWKATLNYYKPMLKDQANQ-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
+ PRD LGI+L D+P+ Y+FI+R RI+L+AD+++QL+M+KLQSYK++V L+F+G QYQ
Sbjct: 58 LEFPRDFLGISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQ 117
Query: 370 LGDFQ 384
LGDF+
Sbjct: 118 LGDFR 122
>ref|XP_006293516.1| hypothetical protein CARUB_v10024033mg [Capsella rubella]
gi|565471430|ref|XP_006293517.1| hypothetical protein
CARUB_v10024033mg [Capsella rubella]
gi|482562224|gb|EOA26414.1| hypothetical protein
CARUB_v10024033mg [Capsella rubella]
gi|482562225|gb|EOA26415.1| hypothetical protein
CARUB_v10024033mg [Capsella rubella]
Length = 219
Score = 155 bits (392), Expect = 5e-36
Identities = 70/125 (56%), Positives = 95/125 (76%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MPVKW++HWQPNQGST+SSQ+L E QCVE K+ +W+ TL +Y+P+ +D A
Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEASQCVESINGV-KEGRWKATLNYYKPILKDQANQ-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
S+ PRD LGI+L D P Y+FI+R RI+++AD N+Q +M+KLQSYK++V L+FEG QYQ
Sbjct: 58 SEFPRDFLGISLADEPDKYYFIIRSQRIVVEADTNIQSIMEKLQSYKSKVALYFEGFQYQ 117
Query: 370 LGDFQ 384
LGDF+
Sbjct: 118 LGDFR 122
>gb|EMS63764.1| Putative mediator of RNA polymerase II transcription subunit 20
[Triticum urartu]
Length = 223
Score = 154 bits (390), Expect = 9e-36
Identities = 73/127 (57%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = +1
Query: 13 PVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPVS 192
P KWLMHW PN G TL++Q+L+E C C E G KD +W+T++ FYRPM RD
Sbjct: 3 PAKWLMHWHPNPGVTLNTQILSEACGCAESLGGT-KDGRWKTSIIFYRPMTRDGPGGAQQ 61
Query: 193 ----DVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGS 360
DVPR+LLG+ALH+RP YF ILR+ R++LQADA +M+KLQS+KARV L+FEG
Sbjct: 62 NLPPDVPRELLGVALHERPGLYFSILRNQRLVLQADAAFSQVMEKLQSFKARVNLNFEGF 121
Query: 361 QYQLGDF 381
QYQLGDF
Sbjct: 122 QYQLGDF 128
>ref|XP_004956948.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20a-like [Setaria italica]
Length = 227
Score = 154 bits (389), Expect = 1e-35
Identities = 74/131 (56%), Positives = 95/131 (72%), Gaps = 8/131 (6%)
Frame = +1
Query: 13 PVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPVS 192
PVKWLMHW P+ G+TL++Q+LAE C C E G A KD +W+T++ FYR M RD AA +
Sbjct: 3 PVKWLMHWHPSPGATLNTQILAEACGCAESLGGA-KDGRWKTSIIFYRAMTRDGGAAGPA 61
Query: 193 --------DVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLH 348
D+PR+LLG+ALH+RP YF I+R +++LQADA +M+KLQSYKARV L+
Sbjct: 62 GQQGQQHGDLPRELLGVALHERPGLYFSIVRLAKLVLQADATFPQVMEKLQSYKARVALN 121
Query: 349 FEGSQYQLGDF 381
FEG QYQLGDF
Sbjct: 122 FEGFQYQLGDF 132
>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20a-like [Cucumis sativus]
gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 20a-like
[Cucumis sativus]
Length = 223
Score = 153 bits (387), Expect = 2e-35
Identities = 71/125 (56%), Positives = 95/125 (76%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW++HWQPN GST++SQ+L EV QCVE K KW+ TLTFY+P+ RD + P
Sbjct: 1 MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGV-KGGKWKATLTFYKPILRDQNS-PA 58
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
++ PRD LGI+L ++P+ Y+ I+R RI+L+AD +Q +M+KLQSYK RV L+FEG QYQ
Sbjct: 59 AEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQ 118
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 119 LGDFQ 123
>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 153 bits (387), Expect = 2e-35
Identities = 69/125 (55%), Positives = 98/125 (78%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW+ HWQPN G+T++SQ++ EV QCVE K+ +W+ TLTFY+PM R A P
Sbjct: 1 MPLKWVFHWQPNAGTTVNSQMINEVSQCVESINGV-KEGRWKATLTFYKPMFRADQAVP- 58
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
++ PRD LGI+L ++P+ Y+FI+R +I+L+AD+++Q++M+KLQSYK+RV L FEG QYQ
Sbjct: 59 AEYPRDFLGISLPEQPNRYYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQ 118
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 119 LGDFQ 123
>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 20-like [Vitis vinifera]
Length = 222
Score = 153 bits (387), Expect = 2e-35
Identities = 69/125 (55%), Positives = 98/125 (78%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
MP+KW+ HWQPN G+T++SQ++ EV QCVE K+ +W+ TLTFY+PM RD A
Sbjct: 1 MPLKWVFHWQPNAGTTVNSQMINEVSQCVESINGV-KEGRWKATLTFYKPMFRDQAVP-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
++ PRD LGI+L ++P+ Y+FI+R +I+L+AD+++Q++M+KLQSYK+RV L FEG QYQ
Sbjct: 58 AEYPRDFLGISLPEQPNRYYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122
>ref|XP_003578193.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 20-like [Brachypodium distachyon]
Length = 225
Score = 152 bits (385), Expect = 3e-35
Identities = 76/127 (59%), Positives = 91/127 (71%), Gaps = 6/127 (4%)
Frame = +1
Query: 19 KWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAA----- 183
K LMHW PN G TL+SQ+LAE C C E G KD +W+T++ FYRPM RD AA
Sbjct: 5 KCLMHWHPNPGVTLNSQILAEACGCAESLGGT-KDGRWKTSIIFYRPMTRDGTAAGGAQQ 63
Query: 184 -PVSDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGS 360
+DV R+LLG+ALH+RP YF ILR R++LQADA L+M+KLQSYKARV L+FEG
Sbjct: 64 QQPNDVARELLGVALHERPGLYFSILRPQRLVLQADAAFPLVMEKLQSYKARVTLNFEGF 123
Query: 361 QYQLGDF 381
QYQLGDF
Sbjct: 124 QYQLGDF 130
>ref|XP_006480516.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20a-like [Citrus sinensis]
Length = 251
Score = 151 bits (381), Expect = 1e-34
Identities = 69/125 (55%), Positives = 95/125 (76%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
M +KW++HWQPN G++++SQ+L EV QCVE K+ +W+ TLTFY+PM RD + A
Sbjct: 1 MTIKWVLHWQPNVGTSVNSQILNEVSQCVESINGV-KEGRWKATLTFYKPMLRDQSLA-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
S+ PRD LGI + + P+ YFF++R RI+L+AD+ +Q +M+KLQSYK RV L+FEG QYQ
Sbjct: 58 SEFPRDFLGIMVPECPNKYFFVIRAQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122
>ref|XP_006428624.1| hypothetical protein CICLE_v10012695mg [Citrus clementina]
gi|568853609|ref|XP_006480443.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 20a-like [Citrus
sinensis] gi|557530681|gb|ESR41864.1| hypothetical
protein CICLE_v10012695mg [Citrus clementina]
Length = 222
Score = 151 bits (381), Expect = 1e-34
Identities = 69/125 (55%), Positives = 95/125 (76%)
Frame = +1
Query: 10 MPVKWLMHWQPNQGSTLSSQVLAEVCQCVEGFGAAAKDRKWRTTLTFYRPMARDSAAAPV 189
M +KW++HWQPN G++++SQ+L EV QCVE K+ +W+ TLTFY+PM RD + A
Sbjct: 1 MTIKWVLHWQPNVGTSVNSQILNEVSQCVESINGV-KEGRWKATLTFYKPMLRDQSLA-- 57
Query: 190 SDVPRDLLGIALHDRPSAYFFILRHHRIILQADANVQLLMDKLQSYKARVVLHFEGSQYQ 369
S+ PRD LGI + + P+ YFF++R RI+L+AD+ +Q +M+KLQSYK RV L+FEG QYQ
Sbjct: 58 SEFPRDFLGIMVPECPNKYFFVIRAQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQ 117
Query: 370 LGDFQ 384
LGDFQ
Sbjct: 118 LGDFQ 122