BLASTX nr result
ID: Zingiber24_contig00011004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011004
(572 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22422.1| unknown [Picea sitchensis] 101 1e-23
gb|ACN41123.1| unknown [Picea sitchensis] 101 2e-23
gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255... 101 2e-23
gb|AFW85413.1| 40S ribosomal protein S17-4 [Zea mays] 100 3e-22
ref|NP_001274871.1| 40S ribosomal protein S17-like protein [Sola... 100 3e-22
ref|NP_001149330.1| 40S ribosomal protein S17-4 [Zea mays] gi|19... 100 6e-22
gb|ACG26538.1| 40S ribosomal protein S17-4 [Zea mays] 100 6e-22
ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi... 100 8e-22
ref|XP_006345872.1| PREDICTED: 40S ribosomal protein S17-like is... 100 8e-22
ref|XP_004249949.1| PREDICTED: 40S ribosomal protein S17-like [S... 100 8e-22
ref|NP_001132853.1| uncharacterized protein LOC100194345 [Zea ma... 99 8e-22
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum] 100 1e-21
ref|NP_001048708.1| Os03g0109500 [Oryza sativa Japonica Group] g... 100 1e-21
gb|EEC74366.1| hypothetical protein OsI_09682 [Oryza sativa Indi... 100 1e-21
ref|XP_006649249.1| PREDICTED: 40S ribosomal protein S17-like [O... 100 2e-21
ref|XP_006854735.1| hypothetical protein AMTR_s00030p00243530 [A... 99 2e-21
ref|XP_002436652.1| hypothetical protein SORBIDRAFT_10g006620 [S... 99 2e-21
ref|NP_001064585.1| Os10g0411800 [Oryza sativa Japonica Group] g... 99 3e-21
ref|XP_004985262.1| PREDICTED: 40S ribosomal protein S17-4-like ... 99 4e-21
gb|ACG48690.1| 40S ribosomal protein S17-4 [Zea mays] 97 4e-21
>gb|ABK22422.1| unknown [Picea sitchensis]
Length = 145
Score = 101 bits (251), Expect(2) = 1e-23
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 34.7 bits (78), Expect(2) = 1e-23
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPA 217
SLGMADLPGV KQAD PA
Sbjct: 108 SLGMADLPGVVKQADPPA 125
>gb|ACN41123.1| unknown [Picea sitchensis]
Length = 146
Score = 101 bits (251), Expect(2) = 2e-23
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 33.5 bits (75), Expect(2) = 2e-23
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPA 217
SLGM+DLPGV KQAD PA
Sbjct: 108 SLGMSDLPGVVKQADPPA 125
>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
[Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
[Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
[Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
[Picea sitchensis]
Length = 146
Score = 101 bits (251), Expect(2) = 2e-23
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 33.5 bits (75), Expect(2) = 2e-23
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPA 217
SLGM+DLPGV KQAD PA
Sbjct: 108 SLGMSDLPGVVKQADPPA 125
>gb|AFW85413.1| 40S ribosomal protein S17-4 [Zea mays]
Length = 142
Score = 100 bits (248), Expect(2) = 3e-22
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 31.2 bits (69), Expect(2) = 3e-22
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMADLPGVE+QA+ A A
Sbjct: 108 ALGMADLPGVERQAEVSNAPA 128
>ref|NP_001274871.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
gi|76573345|gb|ABA46777.1| 40S ribosomal protein
S17-like protein [Solanum tuberosum]
Length = 144
Score = 100 bits (248), Expect(2) = 3e-22
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVP 86
Score = 30.8 bits (68), Expect(2) = 3e-22
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
SLGM+DLPGV KQA P A A
Sbjct: 108 SLGMSDLPGVVKQAAEPQAVA 128
>ref|NP_001149330.1| 40S ribosomal protein S17-4 [Zea mays] gi|195626444|gb|ACG35052.1|
40S ribosomal protein S17-4 [Zea mays]
gi|195634707|gb|ACG36822.1| 40S ribosomal protein S17-4
[Zea mays]
Length = 142
Score = 100 bits (248), Expect(2) = 6e-22
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 30.0 bits (66), Expect(2) = 6e-22
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAA 220
+LGMADLPGVE+QA+ A
Sbjct: 108 ALGMADLPGVERQAEVSNA 126
>gb|ACG26538.1| 40S ribosomal protein S17-4 [Zea mays]
Length = 139
Score = 100 bits (248), Expect(2) = 6e-22
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 30.0 bits (66), Expect(2) = 6e-22
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAA 220
+LGMADLPGVE+QA+ A
Sbjct: 108 ALGMADLPGVERQAEVSNA 126
>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
ribosomal protein S17
gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
protein S17 [Solanum lycopersicum]
Length = 144
Score = 100 bits (248), Expect(2) = 8e-22
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVP 86
Score = 29.6 bits (65), Expect(2) = 8e-22
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGM+DLPGV KQA P A A
Sbjct: 108 ALGMSDLPGVVKQAAEPQAVA 128
>ref|XP_006345872.1| PREDICTED: 40S ribosomal protein S17-like isoform X1 [Solanum
tuberosum] gi|565358112|ref|XP_006345873.1| PREDICTED:
40S ribosomal protein S17-like isoform X2 [Solanum
tuberosum]
Length = 144
Score = 100 bits (248), Expect(2) = 8e-22
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVP 86
Score = 29.6 bits (65), Expect(2) = 8e-22
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGM+DLPGV KQA P A A
Sbjct: 108 ALGMSDLPGVVKQAAEPQAVA 128
>ref|XP_004249949.1| PREDICTED: 40S ribosomal protein S17-like [Solanum lycopersicum]
Length = 144
Score = 100 bits (248), Expect(2) = 8e-22
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVP 86
Score = 29.6 bits (65), Expect(2) = 8e-22
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGM+DLPGV KQA P A A
Sbjct: 108 ALGMSDLPGVVKQAAEPQAVA 128
>ref|NP_001132853.1| uncharacterized protein LOC100194345 [Zea mays]
gi|194695580|gb|ACF81874.1| unknown [Zea mays]
gi|413943990|gb|AFW76639.1| 40S ribosomal protein S17-4
[Zea mays]
Length = 142
Score = 99.0 bits (245), Expect(2) = 8e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGF+THLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 30.8 bits (68), Expect(2) = 8e-22
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMADLPGVE+QA+ + A
Sbjct: 108 ALGMADLPGVERQAEVSSVPA 128
>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
Length = 145
Score = 100 bits (248), Expect(2) = 1e-21
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVP 86
Score = 29.3 bits (64), Expect(2) = 1e-21
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMA+LPGV KQA P A A
Sbjct: 108 ALGMAELPGVVKQAAEPQAVA 128
>ref|NP_001048708.1| Os03g0109500 [Oryza sativa Japonica Group]
gi|24431604|gb|AAN61484.1| Putative 40S ribosomal
protein S17 [Oryza sativa Japonica Group]
gi|108705781|gb|ABF93576.1| 40S ribosomal protein S17,
putative, expressed [Oryza sativa Japonica Group]
gi|113547179|dbj|BAF10622.1| Os03g0109500 [Oryza sativa
Japonica Group] gi|125584646|gb|EAZ25310.1| hypothetical
protein OsJ_09121 [Oryza sativa Japonica Group]
Length = 144
Score = 100 bits (248), Expect(2) = 1e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 29.3 bits (64), Expect(2) = 1e-21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 164 SLGMADLPGVEKQADA 211
SLGMADLPGV +Q DA
Sbjct: 108 SLGMADLPGVVRQPDA 123
>gb|EEC74366.1| hypothetical protein OsI_09682 [Oryza sativa Indica Group]
Length = 193
Score = 99.8 bits (247), Expect(2) = 1e-21
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+++PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 85 EEVSVLPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 135
Score = 29.3 bits (64), Expect(2) = 1e-21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 164 SLGMADLPGVEKQADA 211
SLGMADLPGV +Q DA
Sbjct: 157 SLGMADLPGVVRQPDA 172
>ref|XP_006649249.1| PREDICTED: 40S ribosomal protein S17-like [Oryza brachyantha]
Length = 142
Score = 100 bits (248), Expect(2) = 2e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 28.5 bits (62), Expect(2) = 2e-21
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAA 220
SLGMA+LPGV +QAD ++
Sbjct: 108 SLGMAELPGVVRQADVSSS 126
>ref|XP_006854735.1| hypothetical protein AMTR_s00030p00243530 [Amborella trichopoda]
gi|548858421|gb|ERN16202.1| hypothetical protein
AMTR_s00030p00243530 [Amborella trichopoda]
Length = 147
Score = 99.0 bits (245), Expect(2) = 2e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEVAIIPSKRLRNKIAGFSTHLM+RIQ+GPVRGISLKLQEEERERRMD+VP
Sbjct: 36 EEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDYVP 86
Score = 29.3 bits (64), Expect(2) = 2e-21
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAA 220
+LGMADLPGV KQA+ PAA
Sbjct: 108 ALGMADLPGVVKQAE-PAA 125
>ref|XP_002436652.1| hypothetical protein SORBIDRAFT_10g006620 [Sorghum bicolor]
gi|241914875|gb|EER88019.1| hypothetical protein
SORBIDRAFT_10g006620 [Sorghum bicolor]
Length = 142
Score = 99.0 bits (245), Expect(2) = 2e-21
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGF+THLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 29.3 bits (64), Expect(2) = 2e-21
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMADLPGVE+Q + A A
Sbjct: 108 ALGMADLPGVERQQEVSNAPA 128
>ref|NP_001064585.1| Os10g0411800 [Oryza sativa Japonica Group] gi|582044883|pdb|3J60|R
Chain R, Localization Of The Small Subunit Ribosomal
Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome gi|31432043|gb|AAP53735.1| 40S
ribosomal protein S17-4, putative, expressed [Oryza
sativa Japonica Group] gi|113639194|dbj|BAF26499.1|
Os10g0411800 [Oryza sativa Japonica Group]
gi|125531883|gb|EAY78448.1| hypothetical protein
OsI_33538 [Oryza sativa Indica Group]
Length = 141
Score = 99.0 bits (245), Expect(2) = 3e-21
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGF+THLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 28.9 bits (63), Expect(2) = 3e-21
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPA 217
+LGMADLPGVE+Q + A
Sbjct: 108 ALGMADLPGVERQQEVSA 125
>ref|XP_004985262.1| PREDICTED: 40S ribosomal protein S17-4-like [Setaria italica]
Length = 143
Score = 99.0 bits (245), Expect(2) = 4e-21
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGF+THLMRRIQRGPVRGISLKLQEEERERRMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 86
Score = 28.5 bits (62), Expect(2) = 4e-21
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMADLPGVE+Q + A A
Sbjct: 108 ALGMADLPGVERQPENTNAPA 128
>gb|ACG48690.1| 40S ribosomal protein S17-4 [Zea mays]
Length = 142
Score = 96.7 bits (239), Expect(2) = 4e-21
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 3 EEVAIIPSKRLRNKIAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFVP 155
EEV+I+PSKRLRNK+AGF+THLMRRIQRGPVRGISLKLQEEERE RMDFVP
Sbjct: 36 EEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEEREXRMDFVP 86
Score = 30.8 bits (68), Expect(2) = 4e-21
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 164 SLGMADLPGVEKQADAPAAQA 226
+LGMADLPGVE+QA+ + A
Sbjct: 108 ALGMADLPGVERQAEVSSVPA 128