BLASTX nr result
ID: Zingiber24_contig00010905
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00010905
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006659570.1| PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-pro... 73 3e-11
ref|NP_001062197.1| Os08g0508600 [Oryza sativa Japonica Group] g... 66 4e-09
gb|EMS54968.1| hypothetical protein TRIUR3_11840 [Triticum urartu] 65 9e-09
gb|EMT02425.1| hypothetical protein F775_19131 [Aegilops tauschii] 65 1e-08
ref|XP_003575879.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 64 2e-08
ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-... 64 2e-08
ref|XP_004986336.1| PREDICTED: uncharacterized protein LOC101770... 63 4e-08
gb|EAZ43285.1| hypothetical protein OsJ_27881 [Oryza sativa Japo... 63 4e-08
ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [S... 63 5e-08
gb|EAZ07564.1| hypothetical protein OsI_29817 [Oryza sativa Indi... 63 5e-08
dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 6e-08
gb|AFW68078.1| pre-rRNA-processing protein TSR2 [Zea mays] 62 8e-08
ref|XP_004971050.1| PREDICTED: pre-rRNA-processing protein TSR2-... 61 2e-07
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|5... 61 2e-07
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|5... 61 2e-07
gb|EOY11156.1| Pre-rRNA-processing protein TSR2, putative [Theob... 60 2e-07
ref|NP_001146941.1| LOC100280550 [Zea mays] gi|195605470|gb|ACG2... 60 2e-07
ref|XP_006471770.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 60 3e-07
ref|XP_006433074.1| hypothetical protein CICLE_v10002511mg [Citr... 60 3e-07
gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|1171659... 59 7e-07
>ref|XP_006659570.1| PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processing protein
TSR2-like [Oryza brachyantha]
Length = 196
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 11/89 (12%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE 82
EE+AE+L+IMHE+ ++ NY S+EKLR P +V +S+KI D D DD
Sbjct: 96 EEIAEQLLIMHEECMQSNYSSVEKLRNTRPQGNAVSQSRKISVDGDDDSSDDDDDDDEPS 155
Query: 81 MIVDESNASD-MVVEKPK-SEQVPDEDGW 1
M+ +E+ +D MVV++PK S+ VPD DGW
Sbjct: 156 MVDNEAGGADKMVVDEPKPSKPVPDADGW 184
>ref|NP_001062197.1| Os08g0508600 [Oryza sativa Japonica Group]
gi|42408991|dbj|BAD10246.1| unknown protein [Oryza
sativa Japonica Group] gi|42409347|dbj|BAD10662.1|
unknown protein [Oryza sativa Japonica Group]
gi|113624166|dbj|BAF24111.1| Os08g0508600 [Oryza sativa
Japonica Group] gi|215740471|dbj|BAG97127.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 198
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 13/91 (14%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE 82
EEVAE+L+IMHE+ L+ NY S+EKLR +V +S+K+V D D DD E
Sbjct: 96 EEVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDGE 155
Query: 81 ---MIVDESNASDMVVEKPK-SEQVPDEDGW 1
M + +A M V++PK S+ VPD DGW
Sbjct: 156 PSMMDNEAGSAEKMAVDEPKPSKPVPDADGW 186
>gb|EMS54968.1| hypothetical protein TRIUR3_11840 [Triticum urartu]
Length = 117
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Frame = -1
Query: 231 EVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDSDDVSEMIVDE----- 67
EVAE+++IMHE+ L+ NY SIEKLR +V +S+ +V + DD S+ D+
Sbjct: 21 EVAEQVLIMHEECLQNNYSSIEKLRNTRAQGNAVSQSRMMVTDEGDDSSDDSSDDDDGDE 80
Query: 66 -SNASDMVVEKPK-SEQVPDEDGW 1
+ A DM V++PK S+ PD DGW
Sbjct: 81 PARADDMSVDEPKPSKPAPDADGW 104
>gb|EMT02425.1| hypothetical protein F775_19131 [Aegilops tauschii]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = -1
Query: 228 VAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDSDDVSEMIVDE------ 67
VAE+++IMHE+ L+ NY SIEKLR A +V +S+ +V + DD S+ D+
Sbjct: 73 VAEQVLIMHEECLQNNYSSIEKLRNTRAQANAVSQSRMMVTDEGDDSSDDSSDDDDGDEP 132
Query: 66 SNASDMVVEKPK-SEQVPDEDGW 1
+ A DM V++PK S+ PD DGW
Sbjct: 133 ARADDMSVDEPKPSKPAPDADGW 155
>ref|XP_003575879.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Brachypodium
distachyon]
Length = 192
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDSDDVSEMIVDESNA- 58
EEVAE+++IMHE L+GNY SIEKLR +V S+++V D DD S+ + S A
Sbjct: 95 EEVAEQILIMHEGCLQGNYSSIEKLRNTHVQGNAVSLSRQMVTDDDDDSSDDDGEPSMAG 154
Query: 57 ------SDMVVEKPK-SEQVPDEDGW 1
+MVV++PK S+ VPD DG+
Sbjct: 155 NEAVRPDEMVVDEPKPSKPVPDADGF 180
>ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Brachypodium
distachyon]
Length = 192
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDSDDVSEMIVDESNA- 58
EEVAE+++IMHE L+GNY SIEKLR +V S+++V D DD S+ + S A
Sbjct: 95 EEVAEQILIMHEGCLQGNYSSIEKLRNTHVQGNAVSLSRQMVTDDDDDSSDDDGEPSMAG 154
Query: 57 ------SDMVVEKPK-SEQVPDEDGW 1
+MVV++PK S+ VPD DG+
Sbjct: 155 NEAVRPDEMVVDEPKPSKPVPDADGF 180
>ref|XP_004986336.1| PREDICTED: uncharacterized protein LOC101770842 [Setaria italica]
Length = 213
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 12/90 (13%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKI---------VDYDSDDVSE 82
EEVAE+L+IMHE+ L+ NY SIE+LR L +V +S+++ D D DD +
Sbjct: 88 EEVAEQLLIMHEECLQSNYSSIERLRNLHVQGNAVSQSRQVEGSDDGRDSSDDDDDDDAL 147
Query: 81 MIVDESNAS--DMVVEKPK-SEQVPDEDGW 1
M+ D+S A+ +M V++P+ S V D DGW
Sbjct: 148 MMDDDSVAAPEEMAVDRPRPSNPVTDADGW 177
>gb|EAZ43285.1| hypothetical protein OsJ_27881 [Oryza sativa Japonica Group]
Length = 226
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 13/90 (14%)
Frame = -1
Query: 231 EVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE- 82
+VAE+L+IMHE+ L+ NY S+EKLR +V +S+K+V D D DD E
Sbjct: 125 QVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDGEP 184
Query: 81 --MIVDESNASDMVVEKPK-SEQVPDEDGW 1
M + +A M V++PK S+ VPD DGW
Sbjct: 185 SMMDNEAGSAEKMAVDEPKPSKPVPDADGW 214
>ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [Sorghum bicolor]
gi|241920574|gb|EER93718.1| hypothetical protein
SORBIDRAFT_01g012820 [Sorghum bicolor]
Length = 200
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE 82
EEVAE+L+I+HE+ L+ NY SIEKLR +V +S++IV D DD S
Sbjct: 100 EEVAEQLLIIHEECLQNNYSSIEKLRNSHVQGNAVSQSRQIVADDDDDSDSSDDGDDTSM 159
Query: 81 MIVDESNASDMVVEKPKSEQ-VPDEDGW 1
M E+ +M V++P+ + PD DGW
Sbjct: 160 MEDQEAPPEEMAVDRPRPPRPTPDADGW 187
>gb|EAZ07564.1| hypothetical protein OsI_29817 [Oryza sativa Indica Group]
Length = 227
Score = 62.8 bits (151), Expect = 5e-08
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Frame = -1
Query: 231 EVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV-----------DYDSDDVS 85
+VAE+L+IMHE+ L+ NY S+EKLR +V +S+K+V D D DD
Sbjct: 125 QVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDDGE 184
Query: 84 EMIVDE--SNASDMVVEKPK-SEQVPDEDGW 1
++D +A M V++PK S+ VPD DGW
Sbjct: 185 PSMMDNEAGSAEKMAVDEPKPSKPVPDADGW 215
>dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 191
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = -1
Query: 231 EVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDSDDVSEMIVDESNASD 52
EVAE+++IMHE+ L+ NY SI+KLR +V +S+ +V D DD S+ D+ N+SD
Sbjct: 96 EVAEQVLIMHEECLQNNYSSIDKLRNTRTQGAAVSQSRMMVTDDDDDSSD---DDDNSSD 152
Query: 51 --------MVVEKPK-SEQVPDEDGW 1
M V++PK + PD DGW
Sbjct: 153 DDDGDESSMSVDEPKPPKPAPDADGW 178
>gb|AFW68078.1| pre-rRNA-processing protein TSR2 [Zea mays]
Length = 199
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE 82
EEVAE+ +I+HE+ L+ NY SIEKLR +V +S++IV D DD S
Sbjct: 99 EEVAEQFLIIHEECLQNNYSSIEKLRNSPVPGNAVSQSRQIVGDDDDDSDSSDDGDDTSM 158
Query: 81 MIVDESNASDMVVEKPK-SEQVPDEDGW 1
+ +E+ +M V++P+ + PD DGW
Sbjct: 159 VADEEAGPEEMAVDRPRPPKPTPDADGW 186
>ref|XP_004971050.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Setaria italica]
Length = 199
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 11/89 (12%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKI-VDYDSDDVSE-------M 79
EEVAE+L+IMHE+ L+ NY SIE LR ++V +S++I D D D S+ M
Sbjct: 95 EEVAEQLLIMHEECLQSNYSSIEVLRNSHVQGSAVSQSRQISADGDDSDSSDDDDGDASM 154
Query: 78 IVDESNAS--DMVVEKPK-SEQVPDEDGW 1
+ DE+ A+ +M V++P+ S+ PD DGW
Sbjct: 155 MEDEAAAAPEEMAVDRPRPSKPAPDADGW 183
>ref|XP_002319614.1| predicted protein [Populus trichocarpa]
gi|566259508|ref|XP_006389312.1| hypothetical protein
POPTR_0030s00320g [Populus trichocarpa]
gi|550312072|gb|ERP48226.1| hypothetical protein
POPTR_0030s00320g [Populus trichocarpa]
Length = 212
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 18/96 (18%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYD------------SDD 91
EEVAE+LMIMHE+ L+GNY SI+KLR GP + K+ V+ D DD
Sbjct: 104 EEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVEDDDDSEDSDSDDKMGDD 163
Query: 90 VSEMIVD------ESNASDMVVEKPKSEQVPDEDGW 1
S M+VD ++N + V +P +++ EDGW
Sbjct: 164 GSNMMVDTPEFQLKTNLVNKPVNEPGAKEAQSEDGW 199
>ref|XP_002328370.1| predicted protein [Populus trichocarpa]
gi|566169539|ref|XP_006382739.1| hypothetical protein
POPTR_0005s04940g [Populus trichocarpa]
gi|550338106|gb|ERP60536.1| hypothetical protein
POPTR_0005s04940g [Populus trichocarpa]
Length = 213
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 18/96 (18%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYD------------SDD 91
EEVAE+LMIMHE+ L+GNY SI+KLR P + K+ VD D DD
Sbjct: 105 EEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQAVDSDDDSEDSGNDDKMGDD 164
Query: 90 VSEMIVDESNASDMV------VEKPKSEQVPDEDGW 1
S M+VD + V P++++ EDGW
Sbjct: 165 ESNMMVDAPEFQSKMYPVNKPVNVPRAKEAQSEDGW 200
>gb|EOY11156.1| Pre-rRNA-processing protein TSR2, putative [Theobroma cacao]
Length = 200
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLG--PIATSVGRSKKIVDYDSDDVSEMIVDESN 61
EEVAE+LMIMHE+ L+GNY+S+EKLR P+A +++ D D+DD + +D N
Sbjct: 91 EEVAEKLMIMHEECLEGNYQSVEKLRTTNPPPVAHVRPSTEEDEDDDNDDDEDDSMDADN 150
Query: 60 ASDMVVEKPKS 28
++M+V+ P S
Sbjct: 151 TTNMMVDVPNS 161
>ref|NP_001146941.1| LOC100280550 [Zea mays] gi|195605470|gb|ACG24565.1|
pre-rRNA-processing protein TSR2 [Zea mays]
Length = 195
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIV---------DYDSDDVSE 82
EEVAE+ +I+HE+ L+ N+ SIEKLR +V +S++IV D DD S
Sbjct: 95 EEVAEQFLIIHEECLQNNFSSIEKLRNSRVPGNAVSQSRQIVGDDDDDSDSSDDGDDTSM 154
Query: 81 MIVDESNASDMVVEKPK-SEQVPDEDGW 1
+ +E+ +M V++P+ + PD DGW
Sbjct: 155 VADEEAGPEEMAVDRPRPPKPTPDADGW 182
>ref|XP_006471770.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X2
[Citrus sinensis]
Length = 191
Score = 60.1 bits (144), Expect = 3e-07
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 16/94 (17%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDS---------DDVSE 82
EEVAE LM+MHE+ L+GNYESI KLR P A + ++ V+ D+ DD S
Sbjct: 86 EEVAERLMVMHEECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSN 145
Query: 81 MIVD--ESNASDMVVEKPKSEQVPD-----EDGW 1
M+VD ESN+ V SE P EDGW
Sbjct: 146 MMVDTAESNSQSNSVNVQASEVRPSVAAEAEDGW 179
>ref|XP_006433074.1| hypothetical protein CICLE_v10002511mg [Citrus clementina]
gi|568835419|ref|XP_006471769.1| PREDICTED:
pre-rRNA-processing protein TSR2 homolog isoform X1
[Citrus sinensis] gi|557535196|gb|ESR46314.1|
hypothetical protein CICLE_v10002511mg [Citrus
clementina]
Length = 205
Score = 60.1 bits (144), Expect = 3e-07
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 16/94 (17%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYDS---------DDVSE 82
EEVAE LM+MHE+ L+GNYESI KLR P A + ++ V+ D+ DD S
Sbjct: 100 EEVAERLMVMHEECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSN 159
Query: 81 MIVD--ESNASDMVVEKPKSEQVPD-----EDGW 1
M+VD ESN+ V SE P EDGW
Sbjct: 160 MMVDTAESNSQSNSVNVQASEVRPSVAAEAEDGW 193
>gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|117165980|dbj|BAF36282.1|
hypothetical protein [Ipomoea trifida]
Length = 201
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Frame = -1
Query: 234 EEVAEELMIMHEDFLKGNYESIEKLRRLGPIATSVGRSKKIVDYD------------SDD 91
EEVAE++MIMHE +GN+ESI +L+R P ++V S++ D DD
Sbjct: 95 EEVAEKMMIMHEQCTEGNFESINELKRTNPGNSAVTYSRQAASDDEDEDDDVENDKVGDD 154
Query: 90 VSEMIVDESNA---SDMVVEKPK-SEQVPDEDGW 1
S+M VD S DM+V++P+ ++ EDGW
Sbjct: 155 SSDMAVDASEVHGQKDMMVDEPRTNDGAETEDGW 188