BLASTX nr result

ID: Zingiber24_contig00010671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00010671
         (567 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [A...    69   8e-10
ref|XP_003525715.1| PREDICTED: exosome component 10-like isoform...    65   1e-08
ref|XP_006601035.1| PREDICTED: exosome component 10-like isoform...    64   3e-08
ref|XP_003551099.1| PREDICTED: exosome component 10-like isoform...    64   3e-08
gb|ESW23770.1| hypothetical protein PHAVU_004G073900g [Phaseolus...    61   2e-07
ref|XP_004489673.1| PREDICTED: exosome component 10-like [Cicer ...    61   2e-07
ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communi...    61   2e-07
ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ...    60   5e-07
emb|CBI31221.3| unnamed protein product [Vitis vinifera]               60   5e-07
ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachy...    57   3e-06
ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [S...    57   4e-06
gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indi...    55   9e-06

>ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [Amborella trichopoda]
           gi|548830652|gb|ERM93575.1| hypothetical protein
           AMTR_s00004p00111480 [Amborella trichopoda]
          Length = 950

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -2

Query: 221 KQGGIASVQLLKKPTQAFGALFGASSFGKKLSSD-KVGLTSQDKNVNKVKEIKFSVALPF 45
           K   +A+VQ+LKKP++AFGAL G S+  +K++ D K+    Q+K  +KV++IK SV LPF
Sbjct: 699 KPVNVATVQMLKKPSRAFGALLGNSASKRKINIDSKLSTWEQEKAESKVEKIKSSVTLPF 758

Query: 44  HSFSGGVTPSEP 9
           HSFSG +T  +P
Sbjct: 759 HSFSGEITNLKP 770


>ref|XP_003525715.1| PREDICTED: exosome component 10-like isoform X1 [Glycine max]
          Length = 877

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 54/152 (35%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
 Frame = -2

Query: 455 EASVETVKTVEHDMDVVEECPKQSIQSPRSGSTSAIVMEQENNV-LPLSGIQCLLTQPEI 279
           EA   T   V    D  E+ P+   Q  +  S       Q+ NV + L         P+ 
Sbjct: 563 EAQAGTASDVVPFTDGTED-PQSHTQDSKESSN-----HQDTNVPINLKSNSLRSEPPKD 616

Query: 278 TENFDKETRDNKVIEHLPQKQGGIASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQ 99
           +     + RD  V   L   +G  A+VQ+LKKPT AFGAL G S+  +KL  DK      
Sbjct: 617 SLTIADQNRDANV-GALSTTKGNGATVQVLKKPTGAFGALLGNSASKRKLGPDK------ 669

Query: 98  DKNVNKVKEIKFSVALPFHSFSGGVTPSEPDV 3
            K  +K+++I+ SV+LPFHSF G    SEP V
Sbjct: 670 GKEDSKLEQIRSSVSLPFHSFLGSSEKSEPTV 701


>ref|XP_006601035.1| PREDICTED: exosome component 10-like isoform X2 [Glycine max]
          Length = 837

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -2

Query: 455 EASVETVKTVEHDMDVVEECP---KQSIQSPRSGSTSAIVMEQENNVLPLSGIQCLLTQP 285
           EA   T   V    D  E+ P   + S +S +  +TS  +  + N+++           P
Sbjct: 515 EAQAVTASDVVPVTDGTEDPPSHTRHSKESSQHQATSVPIKIKSNSLI--------FEPP 566

Query: 284 EITENFDKETRDNKVIEHLPQKQGGIASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLT 105
           + +    ++ RD  V   L   +G  A+VQ+LKKPT AFGAL G+S+  +KL   K    
Sbjct: 567 KDSLTIAEQNRDANV-GALSTAKGNGAAVQVLKKPTGAFGALLGSSASKRKLGPGK---- 621

Query: 104 SQDKNVNKVKEIKFSVALPFHSFSGGVTPSEP 9
              K   K+++I+ SV+LPFHSF G    SEP
Sbjct: 622 --GKEEIKLEQIRSSVSLPFHSFLGSSEKSEP 651


>ref|XP_003551099.1| PREDICTED: exosome component 10-like isoform X1 [Glycine max]
          Length = 889

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -2

Query: 455 EASVETVKTVEHDMDVVEECP---KQSIQSPRSGSTSAIVMEQENNVLPLSGIQCLLTQP 285
           EA   T   V    D  E+ P   + S +S +  +TS  +  + N+++           P
Sbjct: 567 EAQAVTASDVVPVTDGTEDPPSHTRHSKESSQHQATSVPIKIKSNSLI--------FEPP 618

Query: 284 EITENFDKETRDNKVIEHLPQKQGGIASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLT 105
           + +    ++ RD  V   L   +G  A+VQ+LKKPT AFGAL G+S+  +KL   K    
Sbjct: 619 KDSLTIAEQNRDANV-GALSTAKGNGAAVQVLKKPTGAFGALLGSSASKRKLGPGK---- 673

Query: 104 SQDKNVNKVKEIKFSVALPFHSFSGGVTPSEP 9
              K   K+++I+ SV+LPFHSF G    SEP
Sbjct: 674 --GKEEIKLEQIRSSVSLPFHSFLGSSEKSEP 703


>gb|ESW23770.1| hypothetical protein PHAVU_004G073900g [Phaseolus vulgaris]
          Length = 880

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 49/159 (30%), Positives = 71/159 (44%)
 Frame = -2

Query: 479 DQSRNIATEASVETVKTVEHDMDVVEECPKQSIQSPRSGSTSAIVMEQENNVLPLSGIQC 300
           +++  +  EA   T   V    D  E+      QS +  S      +  N  + +     
Sbjct: 554 EEASQLLKEAQAATASDVVPVTDGTEDP-----QSHKQDSKEPSPHQDTNAQIKIKSSSL 608

Query: 299 LLTQPEITENFDKETRDNKVIEHLPQKQGGIASVQLLKKPTQAFGALFGASSFGKKLSSD 120
               P ++    +  RD  V   L   +G   +VQ+LKKP  AFGAL G S+  +KL  D
Sbjct: 609 TSEPPRVSLTVAELDRDANV-GALSTAKGNGTTVQVLKKPPGAFGALLGNSASKRKLGPD 667

Query: 119 KVGLTSQDKNVNKVKEIKFSVALPFHSFSGGVTPSEPDV 3
           K       K   K+++I+ SV LPFH+FSG    SEP V
Sbjct: 668 K------GKEDIKLEQIRSSVTLPFHTFSGSSEKSEPTV 700


>ref|XP_004489673.1| PREDICTED: exosome component 10-like [Cicer arietinum]
          Length = 880

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = -2

Query: 218 QGGIASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHS 39
           +G  A+VQ+LKKP  AFGAL G S+  ++L  DK G     K   K+++I+ SV LPFHS
Sbjct: 636 KGNEATVQVLKKPGGAFGALLGNSASKRRLGPDKKG-----KEEIKLEQIRSSVTLPFHS 690

Query: 38  FSGGVTPSEPDV 3
           FSG    S+P V
Sbjct: 691 FSGSSEDSKPVV 702


>ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 857

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = -2

Query: 206 ASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHSFSGG 27
           A+VQ+LKKP  AFGAL G SS GK+    +  +  +DK+  K+ +I+ SV+LPFHSF G 
Sbjct: 615 ATVQVLKKPAGAFGALLGKSSAGKR----RFDMAKKDKDEIKLDKIRSSVSLPFHSFLGR 670

Query: 26  VTPSEP 9
             P++P
Sbjct: 671 KEPAKP 676


>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
          Length = 931

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = -2

Query: 203 SVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHSFSGG 27
           +VQLLKKP +AFG+L G S+  +KL+SD  G     K   K+++IK SV LPFHSFSGG
Sbjct: 684 TVQLLKKPNRAFGSLLGNSASKRKLNSDPKG-----KEDIKLEQIKSSVNLPFHSFSGG 737


>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = -2

Query: 203 SVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHSFSGG 27
           +VQLLKKP +AFG+L G S+  +KL+SD  G     K   K+++IK SV LPFHSFSGG
Sbjct: 654 TVQLLKKPNRAFGSLLGNSASKRKLNSDPKG-----KEDIKLEQIKSSVNLPFHSFSGG 707


>ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
          Length = 906

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/76 (47%), Positives = 48/76 (63%)
 Frame = -2

Query: 251 DNKVIEHLPQKQGGIASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKE 72
           D +V+ +  Q+Q   A VQ+ K+PT AFGAL G SS G++ +      + Q K+  KV +
Sbjct: 659 DTEVLTNSSQQQVAKAKVQVSKRPT-AFGALLGKSSSGRRPNLFPGFSSEQSKS--KVDK 715

Query: 71  IKFSVALPFHSFSGGV 24
           IK SV LPFH FSGGV
Sbjct: 716 IKSSVVLPFHHFSGGV 731


>ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
            gi|241918434|gb|EER91578.1| hypothetical protein
            SORBIDRAFT_01g021230 [Sorghum bicolor]
          Length = 882

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
 Frame = -2

Query: 455  EASVETVKTVEHDMDVVEECPKQSIQSPRSGSTSAIVMEQENNVLPLSGIQCLLTQPEI- 279
            E +V  VK    D++++      +I+ P     SA+V     NV     +  + ++  + 
Sbjct: 554  ELTVADVKNSSEDIEMIPAVDVGNIEDPND--ESAVVSAVITNVGAAPCMGTITSEASLG 611

Query: 278  ---TENFDKETRDNKVIEHLP-----------QKQGGIASVQLLKKPTQAFGALFGASSF 141
                E+   ET+D+                  Q+Q   A+VQ+ K+PT AFGALFG  + 
Sbjct: 612  NMHLEDVVPETKDSGTSSGFTGLADTEKLSNDQQQAAKATVQVSKRPT-AFGALFGKPAA 670

Query: 140  GKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHSFSGGVTPSEP 9
            G+K          Q K   KV +I  SV LPFH FSGG  PS P
Sbjct: 671  GRKPDLFLGFPNVQGKT--KVDKITSSVVLPFHHFSGGAKPSSP 712


>gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
          Length = 854

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
 Frame = -2

Query: 560 ANMEVNI-NTRSVPASDVLMEPTSSEHVDQSRNIATEASVETVKTVEHDM-DVVEECPKQ 387
           ANM+ N  +T  VPA D        ++V  S      ASVE V    H   +V       
Sbjct: 527 ANMKSNDGDTEMVPADD---GNNDDDNVGPSDEHGAVASVENVGAASHCTGNVTSGASSV 583

Query: 386 SIQSPRSGSTSAIVMEQENNVLPLSGIQCLLTQPEITENFDKETRDNKVIEHLPQKQGGI 207
           ++Q      T ++ +        LSG+                 +D +V+ +  +KQ   
Sbjct: 584 NVQLENPAETKSLGI--------LSGVS---------------GQDMEVLSNGDRKQVAK 620

Query: 206 ASVQLLKKPTQAFGALFGASSFGKKLSSDKVGLTSQDKNVNKVKEIKFSVALPFHSFSGG 27
           A+VQ+ K+PT AFGAL G  + G++ +      +      NKV +IK SVALPFH+F GG
Sbjct: 621 ATVQVSKRPT-AFGALLGKPTSGRRQNL----FSGFSSGQNKVDKIKSSVALPFHNFCGG 675


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