BLASTX nr result

ID: Zingiber24_contig00010403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00010403
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ93650.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   1e-12
ref|XP_004974950.1| PREDICTED: uncharacterized protein LOC101763...    72   1e-10
ref|NP_001169299.1| uncharacterized protein LOC100383163 [Zea ma...    71   2e-10
ref|NP_001147855.1| protein binding protein [Zea mays] gi|195614...    70   4e-10
ref|XP_002447398.1| hypothetical protein SORBIDRAFT_06g000280 [S...    68   1e-09
ref|XP_003580937.1| PREDICTED: uncharacterized protein LOC100836...    67   2e-09

>dbj|BAJ93650.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 765

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 47/92 (51%), Positives = 57/92 (61%)
 Frame = -3

Query: 278 KIYDDDESLLLALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATP 99
           K+YDDDE LL   PKA   G  FNPIPE A+ED+E  GE  + RE EF G         P
Sbjct: 219 KVYDDDEPLLA--PKAAANGSGFNPIPE-ADEDDEDEGEDAAGREGEFRGFFPHP----P 271

Query: 98  RSRAGGVHVTVMPQTALLSKGQRHWNYVVAIK 3
           R+R G + VTV P+ AL+S G+RH  YVV +K
Sbjct: 272 RARTG-LAVTVAPEAALVSSGRRHGKYVVVVK 302


>ref|XP_004974950.1| PREDICTED: uncharacterized protein LOC101763175 [Setaria italica]
          Length = 759

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
 Frame = -3

Query: 425 WREAPFLSAVQRQ----EEDTEQVIDGEADXXXXXXXXXXXXXXXXXXXREPIKIYDDDE 258
           WR+APFL++++       +D ++   G +D                       K+YDDDE
Sbjct: 172 WRQAPFLASLRLHCSSFHDDNKRRASGGSDGRKTPPPPPSS------------KLYDDDE 219

Query: 257 SLLLALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATPRSRA-GG 81
            LL     AN GG  FNPIPE   +DEE   E+G+    EF G         PR R   G
Sbjct: 220 PLLAPKAAANGGG--FNPIPEADEDDEE--EEQGAA---EFRGFF-------PRPRTTSG 265

Query: 80  VHVTVMPQTALLSKGQRHWNYVVAIK 3
           + VTV P+ AL+S G+RH  YVVA+K
Sbjct: 266 LAVTVAPEAALVSTGRRHGKYVVAVK 291


>ref|NP_001169299.1| uncharacterized protein LOC100383163 [Zea mays]
           gi|224028505|gb|ACN33328.1| unknown [Zea mays]
          Length = 493

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 55/142 (38%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = -3

Query: 425 WREAPFLSAVQRQEEDTEQVIDGEADXXXXXXXXXXXXXXXXXXXREPIKIYDDDESLLL 246
           WR+APFL++++      +    G  D                       K+YDDDE LL 
Sbjct: 179 WRQAPFLASLRLHCSFHDDKHRGGGDGRKTSPLA---------------KLYDDDEPLLA 223

Query: 245 ALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATPRSRA-GGVHVT 69
             PKA   G  FNPIPE A+ED+E   E+G+    EF G         PRSR   G+ VT
Sbjct: 224 --PKATANGGGFNPIPE-ADEDDE---EQGAA--SEFRGFFP-----CPRSRTTSGLAVT 270

Query: 68  VMPQTALLSKGQRHWNYVVAIK 3
           V P+ AL+S G+RH  YVVA+K
Sbjct: 271 VAPEVALVSSGRRHGKYVVAVK 292


>ref|NP_001147855.1| protein binding protein [Zea mays] gi|195614154|gb|ACG28907.1|
           protein binding protein [Zea mays]
          Length = 736

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = -3

Query: 425 WREAPFLSAVQRQEEDTEQVIDGEADXXXXXXXXXXXXXXXXXXXREPIKIYDDDESLLL 246
           WR+APFL++++      +    G  D                       K+YDDDE LL 
Sbjct: 181 WRQAPFLASLRLHCSFHDDKHRGGGDGRKTSPLA---------------KLYDDDEPLLA 225

Query: 245 ALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATPRSRA-GGVHVT 69
             PKA   G  FNPIPE A+ED+E   E+G+    EF G         P+SR   G+ VT
Sbjct: 226 --PKATANGGGFNPIPE-ADEDDE---EQGAA--SEFRGFFP-----CPKSRTTSGLAVT 272

Query: 68  VMPQTALLSKGQRHWNYVVAIK 3
           V P+ AL+S G+RH  YVVA+K
Sbjct: 273 VAPEAALVSSGRRHGKYVVAVK 294


>ref|XP_002447398.1| hypothetical protein SORBIDRAFT_06g000280 [Sorghum bicolor]
           gi|241938581|gb|EES11726.1| hypothetical protein
           SORBIDRAFT_06g000280 [Sorghum bicolor]
          Length = 720

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -3

Query: 278 KIYDDDESLLLALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATP 99
           K+YDDDE LL   PKA   G  FNPIPE   +D+E   E+G+    EF G         P
Sbjct: 228 KLYDDDEPLLA--PKAASNGGGFNPIPEADEDDDE---EQGAA---EFRGFF-------P 272

Query: 98  RSRA-GGVHVTVMPQTALLSKGQRHWNYVVAIK 3
           R R   G+ VTV P+ AL+S G+RH  YVVA+K
Sbjct: 273 RPRTTSGLAVTVAPEAALVSSGRRHGKYVVAVK 305


>ref|XP_003580937.1| PREDICTED: uncharacterized protein LOC100836418 [Brachypodium
           distachyon]
          Length = 760

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 49/141 (34%), Positives = 63/141 (44%)
 Frame = -3

Query: 425 WREAPFLSAVQRQEEDTEQVIDGEADXXXXXXXXXXXXXXXXXXXREPIKIYDDDESLLL 246
           WR+APFL++++   +    V                             K+YDDDE LL 
Sbjct: 180 WRQAPFLASLRLHLD----VDSNSPQRNKRRTSDDSGRKTPPPAAHSAAKVYDDDEPLLA 235

Query: 245 ALPKANQGGVRFNPIPEVANEDEECSGEKGSEREDEFHGLLAGTRRATPRSRAGGVHVTV 66
             PKA   G  FNPIPE   ED+       +  E EF G         PR R G + VTV
Sbjct: 236 --PKAAANGSGFNPIPEADEEDD-------ASMEGEFRGFFPHP----PRLRTG-LTVTV 281

Query: 65  MPQTALLSKGQRHWNYVVAIK 3
            P+ AL+S G+RH  YVV +K
Sbjct: 282 APEAALVSSGRRHGKYVVVVK 302


Top