BLASTX nr result

ID: Zingiber24_contig00010276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00010276
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-...    55   7e-06
gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indi...    55   1e-05

>ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-like [Brachypodium
           distachyon]
          Length = 467

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 37/168 (22%)
 Frame = -2

Query: 406 SSHGWLI-ATNDVRIQLQNPITGVQIDLPSIPTLDD------------------------ 302
           S+HGW++ A N   + L NPITG QI LPS+ T++                         
Sbjct: 154 SNHGWIVSADNRSELHLLNPITGDQIALPSVTTIEQVKPVFDDYGALHKYELSRYTALKV 213

Query: 301 ------------RNLMAMKAVLSSDPFRSGHXXXXXXXXXXSMRKDFLFFVSAGDEKWTM 158
                       R  + +KA LSSDP    +                L F  AGD+KWT 
Sbjct: 214 YEAPRVFDLGELREYVYLKAFLSSDPSTGNYYVVLIHYPYMQ-----LSFARAGDDKWTW 268

Query: 157 IPTTLYYFDDIAFHNGKLYAVSQSKEDNAVIVAAYDLTEPDSTQRGML 14
           +P   Y  D I       Y  SQ   D A  + A+D++ P  TQR +L
Sbjct: 269 LPPHTYCSDCI-IEEDLFYVASQ---DGA--IHAFDISGPAVTQRVIL 310


>gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indica Group]
          Length = 414

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
 Frame = -2

Query: 406 SSHGWLIATND-VRIQLQNPITGVQIDLPSIPTLDD------------------------ 302
           SSHGW+I  ++   + L NPITG QI LP + T++                         
Sbjct: 91  SSHGWIITADERSELHLVNPITGKQIALPPVTTIEQVKPIFDDSGAVHKYKYSWYTGQMT 150

Query: 301 -------------RNLMAMKAVLSSDPFRSGHXXXXXXXXXXSMRKDFLFFVSAGDEKWT 161
                        +N +  KA++SSDP  SG            ++   L    +GD+KWT
Sbjct: 151 VSDSPSILAPDELQNFLFNKAIVSSDP--SGGNFIVVLIHNPHLQ---LSIARSGDDKWT 205

Query: 160 MIPTTLYYFDDIAFHNGKLYAVSQSKEDNAVIVAAYDLTEPDSTQRGML 14
            +P    Y +D  F +G LYA++   E     +  YDL+ P  T++ +L
Sbjct: 206 WLPPHKDY-EDCIFRDGLLYALTSEGE-----IHEYDLSGPAITRKIVL 248


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