BLASTX nr result
ID: Zingiber24_contig00010276
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00010276 (407 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-... 55 7e-06 gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indi... 55 1e-05 >ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-like [Brachypodium distachyon] Length = 467 Score = 55.5 bits (132), Expect = 7e-06 Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 37/168 (22%) Frame = -2 Query: 406 SSHGWLI-ATNDVRIQLQNPITGVQIDLPSIPTLDD------------------------ 302 S+HGW++ A N + L NPITG QI LPS+ T++ Sbjct: 154 SNHGWIVSADNRSELHLLNPITGDQIALPSVTTIEQVKPVFDDYGALHKYELSRYTALKV 213 Query: 301 ------------RNLMAMKAVLSSDPFRSGHXXXXXXXXXXSMRKDFLFFVSAGDEKWTM 158 R + +KA LSSDP + L F AGD+KWT Sbjct: 214 YEAPRVFDLGELREYVYLKAFLSSDPSTGNYYVVLIHYPYMQ-----LSFARAGDDKWTW 268 Query: 157 IPTTLYYFDDIAFHNGKLYAVSQSKEDNAVIVAAYDLTEPDSTQRGML 14 +P Y D I Y SQ D A + A+D++ P TQR +L Sbjct: 269 LPPHTYCSDCI-IEEDLFYVASQ---DGA--IHAFDISGPAVTQRVIL 310 >gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indica Group] Length = 414 Score = 55.1 bits (131), Expect = 1e-05 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 38/169 (22%) Frame = -2 Query: 406 SSHGWLIATND-VRIQLQNPITGVQIDLPSIPTLDD------------------------ 302 SSHGW+I ++ + L NPITG QI LP + T++ Sbjct: 91 SSHGWIITADERSELHLVNPITGKQIALPPVTTIEQVKPIFDDSGAVHKYKYSWYTGQMT 150 Query: 301 -------------RNLMAMKAVLSSDPFRSGHXXXXXXXXXXSMRKDFLFFVSAGDEKWT 161 +N + KA++SSDP SG ++ L +GD+KWT Sbjct: 151 VSDSPSILAPDELQNFLFNKAIVSSDP--SGGNFIVVLIHNPHLQ---LSIARSGDDKWT 205 Query: 160 MIPTTLYYFDDIAFHNGKLYAVSQSKEDNAVIVAAYDLTEPDSTQRGML 14 +P Y +D F +G LYA++ E + YDL+ P T++ +L Sbjct: 206 WLPPHKDY-EDCIFRDGLLYALTSEGE-----IHEYDLSGPAITRKIVL 248