BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00010267
         (1355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sa...   404   e-110
gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japo...   404   e-110
ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [...   399   e-108
ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [S...   399   e-108
ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [...   398   e-108
ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, ...   398   e-108
gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| un...   397   e-108
ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [A...   396   e-107
gb|ACF84977.1| unknown [Zea mays]                                     395   e-107
ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195...   394   e-107
dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgar...   388   e-105
gb|EMS61719.1| RNA-binding protein Nova-1 [Triticum urartu]           387   e-105
gb|EMT26053.1| RNA-binding protein Nova-1 [Aegilops tauschii]         385   e-104
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]     382   e-103
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   378   e-102
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              378   e-102
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   374   e-101
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The...   373   e-100
ref|XP_002532622.1| Far upstream element-binding protein, putati...   373   e-100
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The...   372   e-100

>dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica Group]
            gi|48716520|dbj|BAD23125.1| KH domain-containing protein
            NOVA-like [Oryza sativa Japonica Group]
          Length = 343

 Score =  404 bits (1037), Expect = e-110
 Identities = 215/316 (68%), Positives = 251/316 (79%), Gaps = 10/316 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTIN+FQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 35   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 94

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGGSTIKSFIE+S
Sbjct: 95   GLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDS 154

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G  + QM AI+LILSKL ED HYP  ++SPF Y+GL
Sbjct: 155  HAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 214

Query: 654  -----PSNPVGYMIPSAGYNH-VNYGLNGVGGKYPNNK---GMASPAILARTSGGTKEGL 502
                 P  PVGYMIP   YN+ VNYG NG GG+Y NNK    M SPA             
Sbjct: 215  GFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPA---------NNDA 265

Query: 501  KNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEA 322
            ++S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTSERKVTITG+ EA
Sbjct: 266  QDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEA 325

Query: 321  IRVAEAMIMQKVSASA 274
            I+ AE+MIMQ+V+AS+
Sbjct: 326  IQAAESMIMQRVTASS 341


>gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
          Length = 313

 Score =  404 bits (1037), Expect = e-110
 Identities = 215/316 (68%), Positives = 251/316 (79%), Gaps = 10/316 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTIN+FQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 5    DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 64

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGGSTIKSFIE+S
Sbjct: 65   GLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDS 124

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G  + QM AI+LILSKL ED HYP  ++SPF Y+GL
Sbjct: 125  HAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 184

Query: 654  -----PSNPVGYMIPSAGYNH-VNYGLNGVGGKYPNNK---GMASPAILARTSGGTKEGL 502
                 P  PVGYMIP   YN+ VNYG NG GG+Y NNK    M SPA             
Sbjct: 185  GFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPA---------NNDA 235

Query: 501  KNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEA 322
            ++S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTSERKVTITG+ EA
Sbjct: 236  QDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEA 295

Query: 321  IRVAEAMIMQKVSASA 274
            I+ AE+MIMQ+V+AS+
Sbjct: 296  IQAAESMIMQRVTASS 311


>ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium distachyon]
          Length = 349

 Score =  399 bits (1025), Expect = e-108
 Identities = 216/314 (68%), Positives = 251/314 (79%), Gaps = 8/314 (2%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 40   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 99

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA EL+LEK+L+E E+ N+ E R K +L+VPNSSCG IIGKGG+TIK+FIE+S
Sbjct: 100  GLFDEVIKAMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDS 159

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G F  QM AI+LILSKL ED HYP  ++SPF Y+GL
Sbjct: 160  HAGIKISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 219

Query: 654  --PSN----PVGYMIPSAGYNH-VNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKN 496
              PS     PVGYMIP   YN+ VNYG NG GG+Y NNK    P    R S  T +  + 
Sbjct: 220  GFPSYPAPVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNK----PGTPVR-SPATNDA-QE 273

Query: 495  SVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIR 316
            S TIGVADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTS+RKVTITG+PEAI+
Sbjct: 274  SHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQ 333

Query: 315  VAEAMIMQKVSASA 274
             AE+MIMQ+VSAS+
Sbjct: 334  AAESMIMQRVSASS 347



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = -3

Query: 954 EVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDR 778
           E E  +D E  T ++ +V N++ G IIGKGGSTI  F  +S A I++S   +   G NDR
Sbjct: 35  EAEPEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDR 94

Query: 777 LVTLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
           ++ ++G F+E + A+ L+L KL+ E   + +    P     +P++  G +I   G
Sbjct: 95  IIMVSGLFDEVIKAMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGG 149


>ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
            gi|241932895|gb|EES06040.1| hypothetical protein
            SORBIDRAFT_04g037690 [Sorghum bicolor]
          Length = 343

 Score =  399 bits (1024), Expect = e-108
 Identities = 216/317 (68%), Positives = 251/317 (79%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 34   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGG+TIKSFIEES
Sbjct: 94   GLFDEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEES 153

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G+F+ QM+AI LIL KL ED HYP  ++SPF Y+GL
Sbjct: 154  HAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGL 213

Query: 654  -----PSNPVGYMIPSAGYNH-VNYG-LNGVGGKYPNNK---GMASPAILARTSGGTKEG 505
                 P  PVGYMIP   YN+ VNYG  NG GG+Y NNK    M SPA            
Sbjct: 214  TFPNYPGVPVGYMIPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPA---------SNE 264

Query: 504  LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPE 325
             + S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFI+GTS+RKVTITG+ E
Sbjct: 265  AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 324

Query: 324  AIRVAEAMIMQKVSASA 274
            AIR AE+MIMQ+VSAS+
Sbjct: 325  AIRTAESMIMQRVSASS 341



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = -3

Query: 948 EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLV 772
           E+G+D E  T ++ +V N++ G IIGKGGSTI  F  +S A I++S   +   G NDR++
Sbjct: 31  EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90

Query: 771 TLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
            ++G F+E M A+ LIL KL+ E   + +    P     +P++  G +I   G
Sbjct: 91  MVSGLFDEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGG 143


>ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [Setaria italica]
          Length = 344

 Score =  398 bits (1023), Expect = e-108
 Identities = 216/317 (68%), Positives = 251/317 (79%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 35   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 94

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+  + E R KV+L+VPNSSCG IIGKGG+TIKSFIEES
Sbjct: 95   GLFDEVMKAMELILEKLLAEGEEFQEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEES 154

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N +GL+DRLVT+ G+F+ QM+AI LIL KL ED HYP  ++SPF Y+GL
Sbjct: 155  HAGIKISPQDNNYAGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGL 214

Query: 654  -----PSNPVGYMIPSAGYNH-VNYGLNGV-GGKYPNNK---GMASPAILARTSGGTKEG 505
                 P  PVGYMIP   YN+ VNYG NG  GG+Y NNK    M SPA            
Sbjct: 215  TFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGGRYQNNKPSTPMRSPA---------NND 265

Query: 504  LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPE 325
             + S+TIGVADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFI+GTS+RKVTITG+ E
Sbjct: 266  AQESLTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 325

Query: 324  AIRVAEAMIMQKVSASA 274
            AIR AE+MIMQ+VSAS+
Sbjct: 326  AIRTAESMIMQRVSASS 342



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = -3

Query: 948 EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLV 772
           E+G+D E  T ++ +V N++ G IIGKGGSTI  F  +S A I++S   +   G NDR++
Sbjct: 32  EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 91

Query: 771 TLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
            ++G F+E M A+ LIL KL+ E   + +    P     +P++  G +I   G
Sbjct: 92  MVSGLFDEVMKAMELILEKLLAEGEEFQEAEARPKVRLVVPNSSCGGIIGKGG 144


>ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, partial [Oryza
            brachyantha]
          Length = 321

 Score =  398 bits (1022), Expect = e-108
 Identities = 215/318 (67%), Positives = 251/318 (78%), Gaps = 12/318 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 11   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 70

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGG+TIKSFIE+S
Sbjct: 71   GLFDEVIKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEDS 130

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G  + QM AI+LILSKL ED HYP  ++SPF Y+GL
Sbjct: 131  HAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 190

Query: 654  -----PSNPVGYMIPSAGYNH-VNYG--LNGVGGKYPNNK---GMASPAILARTSGGTKE 508
                 P  PVGYMIP   YN+ VNYG   NG GG+Y NNK    M SPA           
Sbjct: 191  SFPSYPGVPVGYMIPQVPYNNPVNYGPNNNGYGGRYQNNKPSTPMRSPA---------NN 241

Query: 507  GLKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSP 328
              ++S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTS+RKVTITG+ 
Sbjct: 242  DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTS 301

Query: 327  EAIRVAEAMIMQKVSASA 274
            EAI+ AE+MIMQ+VSAS+
Sbjct: 302  EAIQAAESMIMQRVSASS 319


>gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| unknown [Zea mays]
            gi|413924015|gb|AFW63947.1| transcribed sequence 1087
            protein [Zea mays]
          Length = 344

 Score =  397 bits (1020), Expect = e-108
 Identities = 215/317 (67%), Positives = 251/317 (79%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR++E FPGT+DRII++S
Sbjct: 35   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVS 94

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGG+TIKSFIEES
Sbjct: 95   GLFDEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEES 154

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G+F+ QM+AI LIL KL ED HYP  ++SPF Y+GL
Sbjct: 155  HAGIKISPQDNNYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGL 214

Query: 654  -----PSNPVGYMIPSAGY-NHVNYG-LNGVGGKYPNNK---GMASPAILARTSGGTKEG 505
                 P  PVGYMIP   Y N VNYG  NG GG+Y NNK    M SPA            
Sbjct: 215  TFPSYPGVPVGYMIPQVPYSNAVNYGPNNGYGGRYQNNKPTTPMRSPA---------SNE 265

Query: 504  LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPE 325
             + S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGD+I+GTS+RKVTITG+PE
Sbjct: 266  AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDYISGTSDRKVTITGTPE 325

Query: 324  AIRVAEAMIMQKVSASA 274
            AIR AE+MIMQ+VSAS+
Sbjct: 326  AIRTAESMIMQRVSASS 342



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -3

Query: 957 SEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLND 781
           S  E+G+D E  T ++ +V N++ G IIGKGGSTI  F  +S A I++S  ++   G ND
Sbjct: 29  SPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTND 88

Query: 780 RLVTLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
           R++ ++G F+E M A+ LIL KL+ E   + +    P     +P++  G +I   G
Sbjct: 89  RIIMVSGLFDEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGG 144


>ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [Amborella trichopoda]
            gi|548845311|gb|ERN04776.1| hypothetical protein
            AMTR_s00140p00057330 [Amborella trichopoda]
          Length = 355

 Score =  396 bits (1018), Expect = e-107
 Identities = 209/319 (65%), Positives = 248/319 (77%), Gaps = 15/319 (4%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            D+KEK   VR LVSNA AGS+IGKGGSTI +FQ+QS ARIQLSRNHE FPGT+DRII+IS
Sbjct: 33   DNKEKPASVRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEYFPGTTDRIIMIS 92

Query: 1011 GTFDEVLKATELILEKILSEV--EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIE 838
            GT DE+L A + IL K+ SE+  EDG+DV+ R K++LIVPNS CG IIGK GSTIKSFIE
Sbjct: 93   GTVDEILTAMDFILSKLQSELHNEDGDDVDPRLKLRLIVPNSGCGGIIGKAGSTIKSFIE 152

Query: 837  ESRAGIKISPQDDNS-GLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTY- 664
             S AGIKISPQD    G++DRLVT+ GS EEQ+ A+ LI+SKLIEDPHY Q  NSP +Y 
Sbjct: 153  NSHAGIKISPQDHGYVGMSDRLVTITGSLEEQLQAVSLIISKLIEDPHYSQWANSPLSYT 212

Query: 663  ----SGLPSNPVGYMIPSAG---YNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEG 505
                SGL   PVGY++P  G   YN +NYG NGVGGKY NNKG+  P +  R S G ++G
Sbjct: 213  GVNFSGLHGVPVGYVLPPVGPVAYNLINYGSNGVGGKYKNNKGLIPPVMALRQSSGPQDG 272

Query: 504  ----LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTIT 337
                + NS+T+GV DEHIGAVVGR G+++MEI QVSGARIKISDRGDFI+GTS+RKVTIT
Sbjct: 273  PSNSVPNSITLGVGDEHIGAVVGRGGRSVMEIMQVSGARIKISDRGDFISGTSDRKVTIT 332

Query: 336  GSPEAIRVAEAMIMQKVSA 280
            GS EAI  AEAMI Q+V++
Sbjct: 333  GSSEAIHTAEAMIQQRVAS 351


>gb|ACF84977.1| unknown [Zea mays]
          Length = 344

 Score =  395 bits (1015), Expect = e-107
 Identities = 215/317 (67%), Positives = 250/317 (78%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK  H+R LVSNA AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 34   DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G F EV+KA ELILEK+L+E E+ N+ E R KV+L+VPNSSCG IIGKGG+TIKSFIEES
Sbjct: 94   GLFGEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEES 153

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G+F+ QM+AI LIL KL ED HYP  ++SPF Y+GL
Sbjct: 154  HAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGL 213

Query: 654  -----PSNPVGYMIPSAGYNH-VNYG-LNGVGGKYPNNK---GMASPAILARTSGGTKEG 505
                 P  PVGYMIP   YN+ VNYG  NG GG+Y NNK    M SPA            
Sbjct: 214  TFPSYPGVPVGYMIPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPA---------SNE 264

Query: 504  LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPE 325
             + S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFI+GTS+RKVTITG+ E
Sbjct: 265  AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 324

Query: 324  AIRVAEAMIMQKVSASA 274
            AIR AE+MIMQ+VSAS+
Sbjct: 325  AIRTAESMIMQRVSASS 341



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = -3

Query: 948 EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLV 772
           E+G+D E    ++ +V N+S G IIGKGGSTI  F  +S A I++S   +   G NDR++
Sbjct: 31  EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90

Query: 771 TLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
            ++G F E M A+ LIL KL+ E   + +    P     +P++  G +I   G
Sbjct: 91  MVSGLFGEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGG 143


>ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195659123|gb|ACG49029.1|
            RNA-binding protein Nova-1 [Zea mays]
          Length = 344

 Score =  394 bits (1012), Expect = e-107
 Identities = 214/317 (67%), Positives = 250/317 (78%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK  H+R LVSNA AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 34   DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G F EV+KA ELILEK+L+E E+ N+ E R KV+L+VPN+SCG IIGKGG+TIKSFIEES
Sbjct: 94   GLFGEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKSFIEES 153

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G+F+ QM+AI LIL KL ED HYP  ++SPF Y+GL
Sbjct: 154  HAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGL 213

Query: 654  -----PSNPVGYMIPSAGYNH-VNYG-LNGVGGKYPNNK---GMASPAILARTSGGTKEG 505
                 P  PVGYMIP   YN+ VNYG  NG GG+Y NNK    M SPA            
Sbjct: 214  TFPSYPGVPVGYMIPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPA---------SNE 264

Query: 504  LKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPE 325
             + S+TIG+ADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFI+GTS+RKVTITG+ E
Sbjct: 265  AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 324

Query: 324  AIRVAEAMIMQKVSASA 274
            AIR AE+MIMQ+VSAS+
Sbjct: 325  AIRTAESMIMQRVSASS 341



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = -3

Query: 948 EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLV 772
           E+G+D E    ++ +V N+S G IIGKGGSTI  F  +S A I++S   +   G NDR++
Sbjct: 31  EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90

Query: 771 TLAGSFEEQMHAIFLILSKLI-EDPHYPQKVNSPFTYSGLPSNPVGYMIPSAG 616
            ++G F E M A+ LIL KL+ E   + +    P     +P+N  G +I   G
Sbjct: 91  MVSGLFGEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGG 143


>dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 360

 Score =  388 bits (997), Expect = e-105
 Identities = 215/321 (66%), Positives = 245/321 (76%), Gaps = 16/321 (4%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 43   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 102

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA EL+LEK+LSE E+ N+ E R K +L+VPNSSCG IIGKGG+TIKSFIE+S
Sbjct: 103  GLFDEVVKAMELVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDS 162

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G    QM AI LILSKL ED HYP  ++SPF Y+GL
Sbjct: 163  HAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGL 222

Query: 654  --PSN----PVGYMIPSAGYNH-VNYGLNGV--------GGKYPNNKGMASPAILARTSG 520
              PS     PVGYMIP   YN+ VNYG NG         GG+Y NNK    P    R+  
Sbjct: 223  GFPSYPAAVPVGYMIPPVPYNNTVNYGPNGYAAPGGGGGGGRYQNNK----PGTPVRSP- 277

Query: 519  GTKEGLKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTI 340
                  + S TIGVADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTS+RKVTI
Sbjct: 278  -ANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTI 336

Query: 339  TGSPEAIRVAEAMIMQKVSAS 277
            TGS EAI+ AEAMIMQ+V+AS
Sbjct: 337  TGSSEAIQAAEAMIMQRVTAS 357


>gb|EMS61719.1| RNA-binding protein Nova-1 [Triticum urartu]
          Length = 330

 Score =  387 bits (993), Expect = e-105
 Identities = 214/323 (66%), Positives = 245/323 (75%), Gaps = 18/323 (5%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 11   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 70

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA EL+LEK+LSE E+ N+ E R K +L+VPNSSCG IIGKGG+TIKSFIE+S
Sbjct: 71   GLFDEVVKAMELVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDS 130

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G    QM AI LILSKL ED HYP  ++SPF Y+GL
Sbjct: 131  HAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGL 190

Query: 654  --PSN----PVGYMIPSAGYNH-VNYGLNGV----------GGKYPNNKGMASPAILART 526
              PS     PVGYMIP   YN+ VNYG NG           GG+Y NNK    P    R+
Sbjct: 191  GFPSYPAAVPVGYMIPQVPYNNAVNYGPNGYAGGGGGGGGGGGRYQNNK----PGTPVRS 246

Query: 525  SGGTKEGLKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKV 346
                    + S TIGVADEHIGAVVGRAG+NI EI Q SGARIKISDRGDFIAGTS+RKV
Sbjct: 247  P--ANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKV 304

Query: 345  TITGSPEAIRVAEAMIMQKVSAS 277
            TITG+ EAI+ AEAMIMQ+V+AS
Sbjct: 305  TITGTSEAIQAAEAMIMQRVTAS 327



 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -3

Query: 951 VEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRL 775
           V + +D E  T ++ +V N++ G IIGKGGSTI  F  +S A I++S   +   G NDR+
Sbjct: 7   VYEHDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 66

Query: 774 VTLAGSFEEQMHAIFLILSKLIED 703
           + ++G F+E + A+ L+L KL+ +
Sbjct: 67  IMVSGLFDEVVKAMELVLEKLLSE 90


>gb|EMT26053.1| RNA-binding protein Nova-1 [Aegilops tauschii]
          Length = 324

 Score =  385 bits (988), Expect = e-104
 Identities = 212/319 (66%), Positives = 243/319 (76%), Gaps = 14/319 (4%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DDKEK TH+R LVSN  AG IIGKGGSTINDFQ+QS ARIQLSR+HE FPGT+DRII++S
Sbjct: 9    DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 68

Query: 1011 GTFDEVLKATELILEKILSEVEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEES 832
            G FDEV+KA EL+LEK+LSE E+ N+ E R K +L+VPNSSCG IIGKGG+TIKSFIE+S
Sbjct: 69   GLFDEVVKAMELVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDS 128

Query: 831  RAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGL 655
             AGIKISPQD+N  GL+DRLVT+ G    QM AI LILSKL ED HYP  ++SPF Y+GL
Sbjct: 129  HAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGL 188

Query: 654  --PSN----PVGYMIPSAGYNH-VNYGLNGV------GGKYPNNKGMASPAILARTSGGT 514
              PS     PVGYMIP   YN+ VNYG NG       GG+Y NNK    P    R+    
Sbjct: 189  GFPSYPAAVPVGYMIPQVPYNNAVNYGPNGYAAGGGGGGRYQNNK----PGTPVRSP--A 242

Query: 513  KEGLKNSVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITG 334
                + S TIGVADEHIGAVVGRAG+NI EI Q SG RIKISDRGDFI GTS+RKVTITG
Sbjct: 243  NNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGTRIKISDRGDFIPGTSDRKVTITG 302

Query: 333  SPEAIRVAEAMIMQKVSAS 277
            + EAI+ AEAMIMQ+V+AS
Sbjct: 303  TSEAIQAAEAMIMQRVTAS 321


>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
          Length = 334

 Score =  382 bits (980), Expect = e-103
 Identities = 207/311 (66%), Positives = 245/311 (78%), Gaps = 11/311 (3%)
 Frame = -3

Query: 1182 EKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILISGTF 1003
            EKHT++R LVSNA AGS+IGKGGSTI +FQ++S ARIQLSRNHE FPGTSDRII+ISGT 
Sbjct: 32   EKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTSDRIIMISGTI 91

Query: 1002 DEVLKATELILEKILSE--VEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESR 829
            DEVLKA ELIL K+L+E  +ED +DVE RTKV+LIVPNSSCG+IIGKGG+TIKSFIE+S+
Sbjct: 92   DEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQ 151

Query: 828  AGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTY---- 664
            AGIKISPQD+N  GLNDRLVTL G+ +EQM AI LILSKL EDPHY Q +++PF+Y    
Sbjct: 152  AGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAGIF 211

Query: 663  -SGLPSNPVGYMIPS---AGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKN 496
             SG    P  Y++PS   A YN ++Y  NG GGK+ N+                KE   N
Sbjct: 212  FSGFHGIPYAYVLPSVATATYNSMSYPSNGAGGKFQNH----------------KEDRSN 255

Query: 495  SVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIR 316
            SVTIGVAD HIG V+GR G+NIMEISQ+SGARIKISDRGDF++GT++RKVTITGS  AIR
Sbjct: 256  SVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIR 315

Query: 315  VAEAMIMQKVS 283
             AE+MIMQKV+
Sbjct: 316  QAESMIMQKVA 326



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 67/211 (31%), Positives = 95/211 (45%), Gaps = 51/211 (24%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DD E  T VRL+V N+  GSIIGKGG+TI  F   S A I++S     F G +DR++ ++
Sbjct: 115  DDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLT 174

Query: 1011 GTFDEVLKATELILEKI------------------------------------------- 961
            GT DE ++A +LIL K+                                           
Sbjct: 175  GTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNS 234

Query: 960  LSEVEDG------NDVEGRT-KVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQD 802
            +S   +G      N  E R+  V + V +   G ++G+GG  I    + S A IKIS + 
Sbjct: 235  MSYPSNGAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRG 294

Query: 801  D-NSGLNDRLVTLAGSFEEQMHAIFLILSKL 712
            D  SG  DR VT+ GS      A  +I+ K+
Sbjct: 295  DFMSGTTDRKVTITGSQRAIRQAESMIMQKV 325


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  378 bits (970), Expect = e-102
 Identities = 204/309 (66%), Positives = 239/309 (77%), Gaps = 3/309 (0%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            D  EK T++R LVSNA AGS+IGKGGSTINDFQ+QS ARIQLSRNHE FPGTSDRII+IS
Sbjct: 28   DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 87

Query: 1011 GTFDEVLKATELILEKILSEV--EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIE 838
            G  +E++KA ELIL K+LSE+  EDG++ + R+KV+LIVPNSSCG IIGKGGSTIKSFIE
Sbjct: 88   GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 147

Query: 837  ESRAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYS 661
            +S+A IKISPQD+N  GL DRLVTL GS EEQM AI LILSKL EDPHY Q +N+PF+Y 
Sbjct: 148  DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSY- 206

Query: 660  GLPSNPVGYMIPSAGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKNSVTIG 481
                        +A YN +NYG NG GGK+ NN                KE   NSVTIG
Sbjct: 207  ------------AAAYNSMNYGPNGAGGKFQNN----------------KEDRSNSVTIG 238

Query: 480  VADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIRVAEAM 301
            VADEHIG VVGR G+NIM+ISQ SGARIKISDRGDF++GT++RKVTITGS  AIR AE+M
Sbjct: 239  VADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESM 298

Query: 300  IMQKVSASA 274
            IMQKV++++
Sbjct: 299  IMQKVASAS 307


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  378 bits (970), Expect = e-102
 Identities = 204/309 (66%), Positives = 239/309 (77%), Gaps = 3/309 (0%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            D  EK T++R LVSNA AGS+IGKGGSTINDFQ+QS ARIQLSRNHE FPGTSDRII+IS
Sbjct: 76   DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 135

Query: 1011 GTFDEVLKATELILEKILSEV--EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIE 838
            G  +E++KA ELIL K+LSE+  EDG++ + R+KV+LIVPNSSCG IIGKGGSTIKSFIE
Sbjct: 136  GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 195

Query: 837  ESRAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYS 661
            +S+A IKISPQD+N  GL DRLVTL GS EEQM AI LILSKL EDPHY Q +N+PF+Y 
Sbjct: 196  DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSY- 254

Query: 660  GLPSNPVGYMIPSAGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKNSVTIG 481
                        +A YN +NYG NG GGK+ NN                KE   NSVTIG
Sbjct: 255  ------------AAAYNSMNYGPNGAGGKFQNN----------------KEDRSNSVTIG 286

Query: 480  VADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIRVAEAM 301
            VADEHIG VVGR G+NIM+ISQ SGARIKISDRGDF++GT++RKVTITGS  AIR AE+M
Sbjct: 287  VADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESM 346

Query: 300  IMQKVSASA 274
            IMQKV++++
Sbjct: 347  IMQKVASAS 355


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  374 bits (961), Expect = e-101
 Identities = 199/311 (63%), Positives = 239/311 (76%), Gaps = 7/311 (2%)
 Frame = -3

Query: 1194 LDDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILI 1015
            LD +EK T++R LVSN+ AGS+IGKGGSTI DFQ+QS ARIQLSRNHE FPGT+DRII++
Sbjct: 29   LDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMV 88

Query: 1014 SGTFDEVLKATELILEKILSEV--EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFI 841
            SG  +E+ +A ELIL K+LSE+  ED ND E +TKV+L+VPN SCG IIGKGG+TI+SFI
Sbjct: 89   SGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFI 148

Query: 840  EESRAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTY 664
            E+S+AGIKISPQD+N  G NDRLVTL GSF+EQM AI LI+SKL EDPHY Q +NSPF+Y
Sbjct: 149  EDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSY 208

Query: 663  SGLPSNPVGYMIPSA---GYNHVNYGLNG-VGGKYPNNKGMASPAILARTSGGTKEGLKN 496
             G    P  Y++PS     YN VNY  NG  GGK  N                +KE   N
Sbjct: 209  PGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQN----------------SKEERSN 252

Query: 495  SVTIGVADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIR 316
            S+T+GVADEHIG VVGR G+NIMEISQ SGARIKISDRGD+++GT++RKVTITGS  AIR
Sbjct: 253  SLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIR 312

Query: 315  VAEAMIMQKVS 283
             AE+MI+QKV+
Sbjct: 313  TAESMILQKVA 323


>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  373 bits (957), Expect = e-100
 Identities = 201/303 (66%), Positives = 239/303 (78%), Gaps = 3/303 (0%)
 Frame = -3

Query: 1182 EKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILISGTF 1003
            EKHT++R LVSNA AGS+IGKGGSTI +FQ++S ARIQLSRNHE FPGTSDRII+ISGT 
Sbjct: 32   EKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTSDRIIMISGTI 91

Query: 1002 DEVLKATELILEKILSE--VEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESR 829
            DEVLKA ELIL K+L+E  +ED +DVE RTKV+LIVPNSSCG+IIGKGG+TIKSFIE+S+
Sbjct: 92   DEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQ 151

Query: 828  AGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGLP 652
            AGIKISPQD+N  GLNDRLVTL G+ +EQM AI LILSKL EDPHY Q +++PF+Y+   
Sbjct: 152  AGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYA--- 208

Query: 651  SNPVGYMIPSAGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKNSVTIGVAD 472
                     +A YN ++Y  NG GGK+ N+                KE   NSVTIGVAD
Sbjct: 209  ---------AATYNSMSYPSNGAGGKFQNH----------------KEDRSNSVTIGVAD 243

Query: 471  EHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIRVAEAMIMQ 292
             HIG V+GR G+NIMEISQ+SGARIKISDRGDF++GT++RKVTITGS  AIR AE+MIMQ
Sbjct: 244  GHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQ 303

Query: 291  KVS 283
            KV+
Sbjct: 304  KVA 306



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DD E  T VRL+V N+  GSIIGKGG+TI  F   S A I++S     F G +DR++ ++
Sbjct: 115  DDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLT 174

Query: 1011 GTFDEVLKATELILEKI-----------------------LSEVEDG------NDVEGRT 919
            GT DE ++A +LIL K+                       +S   +G      N  E R+
Sbjct: 175  GTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAAATYNSMSYPSNGAGGKFQNHKEDRS 234

Query: 918  -KVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLVTLAGSFEEQ 745
              V + V +   G ++G+GG  I    + S A IKIS + D  SG  DR VT+ GS    
Sbjct: 235  NSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 294

Query: 744  MHAIFLILSKL 712
              A  +I+ K+
Sbjct: 295  RQAESMIMQKV 305


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  373 bits (957), Expect = e-100
 Identities = 201/306 (65%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            D  EK T+VR LVSNA AGS+IGKGG+TI DFQ+QS ARIQLSRN+E FPGTSDRIILIS
Sbjct: 30   DSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILIS 89

Query: 1011 GTFDEVLKATELILEKILSEV--EDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIE 838
            G  D+VLK  EL+L K+LSE+  EDG+DV+ RTKV+L+VPNSSCG+IIGKGGS IKSFIE
Sbjct: 90   GILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIE 149

Query: 837  ESRAGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYS 661
            ES+AGIKISPQD+N  GLNDRLVT+ G+ EEQM AI LILSKL +DPHY Q +++PF+Y 
Sbjct: 150  ESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSY- 208

Query: 660  GLPSNPVGYMIPSAGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKNSVTIG 481
                        +  YN +NYG NG GGK+ NN                KE   NSVTIG
Sbjct: 209  ------------AVAYNSMNYGANGAGGKFQNN----------------KEDRTNSVTIG 240

Query: 480  VADEHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIRVAEAM 301
            VAD HIG VVGR G+NIMEISQVSGARIKISDRGDF++GT++RK+ ITGS  AIR AE M
Sbjct: 241  VADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGM 300

Query: 300  IMQKVS 283
            IMQKV+
Sbjct: 301  IMQKVA 306


>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  372 bits (955), Expect = e-100
 Identities = 201/303 (66%), Positives = 238/303 (78%), Gaps = 3/303 (0%)
 Frame = -3

Query: 1182 EKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILISGTF 1003
            EKHT++R LVSNA AGS+IGKGGSTI +FQ++S ARIQLSRNHE FPGTSDRII+ISGT 
Sbjct: 32   EKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTSDRIIMISGTI 91

Query: 1002 DEVLKATELILEKILSE--VEDGNDVEGRTKVKLIVPNSSCGAIIGKGGSTIKSFIEESR 829
            DEVLKA ELIL K+L+E  +ED +DVE RTKV+LIVPNSSCG+IIGKGG+TIKSFIE+S+
Sbjct: 92   DEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQ 151

Query: 828  AGIKISPQDDN-SGLNDRLVTLAGSFEEQMHAIFLILSKLIEDPHYPQKVNSPFTYSGLP 652
            AGIKISPQD+N  GLNDRLVTL G+ +EQM AI LILSKL EDPHY Q +++PF+Y    
Sbjct: 152  AGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSY---- 207

Query: 651  SNPVGYMIPSAGYNHVNYGLNGVGGKYPNNKGMASPAILARTSGGTKEGLKNSVTIGVAD 472
                     +A YN ++Y  NG GGK+ N+                KE   NSVTIGVAD
Sbjct: 208  ---------AATYNSMSYPSNGAGGKFQNH----------------KEDRSNSVTIGVAD 242

Query: 471  EHIGAVVGRAGKNIMEISQVSGARIKISDRGDFIAGTSERKVTITGSPEAIRVAEAMIMQ 292
             HIG V+GR G+NIMEISQ+SGARIKISDRGDF++GT++RKVTITGS  AIR AE+MIMQ
Sbjct: 243  GHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQ 302

Query: 291  KVS 283
            KV+
Sbjct: 303  KVA 305



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 67/190 (35%), Positives = 95/190 (50%), Gaps = 30/190 (15%)
 Frame = -3

Query: 1191 DDKEKHTHVRLLVSNAMAGSIIGKGGSTINDFQTQSAARIQLSRNHEIFPGTSDRIILIS 1012
            DD E  T VRL+V N+  GSIIGKGG+TI  F   S A I++S     F G +DR++ ++
Sbjct: 115  DDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLT 174

Query: 1011 GTFDEVLKATELILEKI----------------------LSEVEDG------NDVEGRT- 919
            GT DE ++A +LIL K+                      +S   +G      N  E R+ 
Sbjct: 175  GTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAATYNSMSYPSNGAGGKFQNHKEDRSN 234

Query: 918  KVKLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDD-NSGLNDRLVTLAGSFEEQM 742
             V + V +   G ++G+GG  I    + S A IKIS + D  SG  DR VT+ GS     
Sbjct: 235  SVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIR 294

Query: 741  HAIFLILSKL 712
             A  +I+ K+
Sbjct: 295  QAESMIMQKV 304