BLASTX nr result
ID: Zingiber24_contig00009888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00009888
(537 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300923.2| hypothetical protein POPTR_0002s06980g [Popu... 47 2e-08
ref|XP_006854530.1| hypothetical protein AMTR_s00030p00033750 [A... 49 3e-08
ref|XP_002307493.1| ubiquinol-cytochrome C reductase complex 7.8... 49 5e-08
ref|NP_172964.1| ubiquinol-cytochrome C reductase hinge protein ... 49 9e-08
gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabi... 49 9e-08
ref|XP_006493299.1| PREDICTED: cytochrome b-c1 complex subunit 6... 46 1e-07
ref|XP_006493298.1| PREDICTED: cytochrome b-c1 complex subunit 6... 46 1e-07
gb|AFK40779.1| unknown [Lotus japonicus] 47 2e-07
ref|XP_002890088.1| predicted protein [Arabidopsis lyrata subsp.... 47 5e-07
gb|AFK37870.1| unknown [Medicago truncatula] 46 5e-07
ref|XP_002269910.1| PREDICTED: cytochrome b-c1 complex subunit 6... 46 7e-07
gb|EMJ22791.1| hypothetical protein PRUPE_ppa017907mg [Prunus pe... 45 7e-07
ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6... 45 9e-07
ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6... 45 9e-07
ref|XP_004485537.1| PREDICTED: cytochrome b-c1 complex subunit 6... 44 1e-06
gb|ABK20928.1| unknown [Picea sitchensis] gi|116778677|gb|ABK209... 42 1e-06
ref|XP_006303490.1| hypothetical protein CARUB_v10010817mg [Caps... 49 2e-06
ref|NP_001065827.1| Os11g0162200 [Oryza sativa Japonica Group] g... 45 2e-06
ref|XP_002300924.2| hypothetical protein POPTR_0002s06990g [Popu... 45 2e-06
ref|XP_004287060.1| PREDICTED: cytochrome b-c1 complex subunit 6... 44 2e-06
>ref|XP_002300923.2| hypothetical protein POPTR_0002s06980g [Populus trichocarpa]
gi|550344443|gb|EEE80196.2| hypothetical protein
POPTR_0002s06980g [Populus trichocarpa]
Length = 210
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2
Query: 401 ADEELVDPKLYLEETCKPKCVRPXI 327
ADEE VDPK YLEE+CKPKCVRP +
Sbjct: 143 ADEEPVDPKKYLEESCKPKCVRPLL 167
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C ALKLF KLK
Sbjct: 193 YWSCVDKCVALKLFSKLK 210
>ref|XP_006854530.1| hypothetical protein AMTR_s00030p00033750 [Amborella trichopoda]
gi|548858216|gb|ERN15997.1| hypothetical protein
AMTR_s00030p00033750 [Amborella trichopoda]
Length = 86
Score = 48.9 bits (115), Expect(2) = 3e-08
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -2
Query: 401 ADEELVDPKLYLEETCKPKCVRPXI 327
ADEELVDPK YLEE+CKPKCV+P +
Sbjct: 19 ADEELVDPKQYLEESCKPKCVKPLL 43
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 69 YWSCVDKCVASKLFSKLK 86
>ref|XP_002307493.1| ubiquinol-cytochrome C reductase complex 7.8 kDa family protein
[Populus trichocarpa] gi|222856942|gb|EEE94489.1|
ubiquinol-cytochrome C reductase complex 7.8 kDa family
protein [Populus trichocarpa]
Length = 69
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VDPK YLEE CKPKCVRP +
Sbjct: 1 MADEEPVDPKKYLEEACKPKCVRPLL 26
Score = 33.9 bits (76), Expect(2) = 5e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 52 YWSCVDKCVAPKLFTKLK 69
>ref|NP_172964.1| ubiquinol-cytochrome C reductase hinge protein [Arabidopsis
thaliana] gi|110740918|dbj|BAE98555.1|
ubiquinol-cytochrome-c reductase like protein
[Arabidopsis thaliana] gi|114050691|gb|ABI49495.1|
At1g15120 [Arabidopsis thaliana]
gi|227204459|dbj|BAH57081.1| AT1G15120 [Arabidopsis
thaliana] gi|332191146|gb|AEE29267.1|
ubiquinol-cytochrome C reductase hinge protein
[Arabidopsis thaliana]
Length = 69
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MAD+E+VDPK YLEE+CKPKCV+P +
Sbjct: 1 MADDEVVDPKKYLEESCKPKCVKPLL 26
Score = 33.5 bits (75), Expect(2) = 9e-08
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW+C+D+C A KLF KLK
Sbjct: 52 YWQCIDKCVAPKLFAKLK 69
>gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabidopsis thaliana]
Length = 69
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MAD+E+VDPK YLEE+CKPKCV+P +
Sbjct: 1 MADDEVVDPKKYLEESCKPKCVKPLL 26
Score = 33.5 bits (75), Expect(2) = 9e-08
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW+C+D+C A KLF KLK
Sbjct: 52 YWQCIDKCVAPKLFAKLK 69
>ref|XP_006493299.1| PREDICTED: cytochrome b-c1 complex subunit 6-like isoform X2
[Citrus sinensis] gi|568880810|ref|XP_006493300.1|
PREDICTED: cytochrome b-c1 complex subunit 6-like
isoform X3 [Citrus sinensis]
Length = 69
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEELVD K Y EE CKPKCV+P +
Sbjct: 1 MADEELVDQKKYFEEACKPKCVKPLL 26
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A+KLF KLK
Sbjct: 52 YWSCIDKCVAVKLFQKLK 69
>ref|XP_006493298.1| PREDICTED: cytochrome b-c1 complex subunit 6-like isoform X1
[Citrus sinensis]
Length = 87
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEELVD K Y EE CKPKCV+P +
Sbjct: 19 MADEELVDQKKYFEEACKPKCVKPLL 44
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A+KLF KLK
Sbjct: 70 YWSCIDKCVAVKLFQKLK 87
>gb|AFK40779.1| unknown [Lotus japonicus]
Length = 69
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VDPK YLEE+CKPKCV+P +
Sbjct: 1 MADEEPVDPKGYLEESCKPKCVKPLL 26
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 52 YWACVDKCVAPKLFTKLK 69
>ref|XP_002890088.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335930|gb|EFH66347.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 69
Score = 46.6 bits (109), Expect(2) = 5e-07
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = -2
Query: 401 ADEELVDPKLYLEETCKPKCVRPXI 327
AD+E+VDPK YLEE+CKPKCV+P +
Sbjct: 2 ADDEVVDPKKYLEESCKPKCVKPLL 26
Score = 32.7 bits (73), Expect(2) = 5e-07
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KLF KLK
Sbjct: 52 YWHCIDKCVAPKLFAKLK 69
>gb|AFK37870.1| unknown [Medicago truncatula]
Length = 69
Score = 46.2 bits (108), Expect(2) = 5e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VDPK LEE+CKPKCVRP +
Sbjct: 1 MADEEPVDPKKLLEESCKPKCVRPLL 26
Score = 33.1 bits (74), Expect(2) = 5e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 52 YWYCVDKCVAPKLFTKLK 69
>ref|XP_002269910.1| PREDICTED: cytochrome b-c1 complex subunit 6-like isoform 1 [Vitis
vinifera] gi|359493106|ref|XP_003634511.1| PREDICTED:
cytochrome b-c1 complex subunit 6-like isoform 2 [Vitis
vinifera]
Length = 69
Score = 46.2 bits (108), Expect(2) = 7e-07
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVR 336
MADEE VDPK YLEE+CKPKCVR
Sbjct: 1 MADEEPVDPKKYLEESCKPKCVR 23
Score = 32.7 bits (73), Expect(2) = 7e-07
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A +LF KLK
Sbjct: 52 YWSCVDKCVAPRLFTKLK 69
>gb|EMJ22791.1| hypothetical protein PRUPE_ppa017907mg [Prunus persica]
Length = 121
Score = 45.1 bits (105), Expect(2) = 7e-07
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VD K YLEE+CKPKCV+P +
Sbjct: 53 MADEEPVDQKKYLEESCKPKCVKPLL 78
Score = 33.9 bits (76), Expect(2) = 7e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 104 YWSCVDKCVAPKLFPKLK 121
>ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
gi|255630456|gb|ACU15586.1| unknown [Glycine max]
Length = 69
Score = 45.1 bits (105), Expect(2) = 9e-07
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VD K YLEE+CKPKCV+P +
Sbjct: 1 MADEEPVDQKRYLEESCKPKCVKPLL 26
Score = 33.5 bits (75), Expect(2) = 9e-07
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KLF KLK
Sbjct: 52 YWSCIDKCVAPKLFTKLK 69
>ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
gi|255628593|gb|ACU14641.1| unknown [Glycine max]
Length = 69
Score = 45.1 bits (105), Expect(2) = 9e-07
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VD K YLEE+CKPKCV+P +
Sbjct: 1 MADEEPVDQKRYLEESCKPKCVKPLL 26
Score = 33.5 bits (75), Expect(2) = 9e-07
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KLF KLK
Sbjct: 52 YWSCIDKCVAPKLFTKLK 69
>ref|XP_004485537.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Cicer arietinum]
Length = 69
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VD K YLE++CKPKCV+P +
Sbjct: 1 MADEEPVDQKRYLEDSCKPKCVKPLL 26
Score = 34.3 bits (77), Expect(2) = 1e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KLF KLK
Sbjct: 52 YWACIDKCVATKLFSKLK 69
>gb|ABK20928.1| unknown [Picea sitchensis] gi|116778677|gb|ABK20959.1| unknown
[Picea sitchensis] gi|116779688|gb|ABK21392.1| unknown
[Picea sitchensis] gi|116785738|gb|ABK23840.1| unknown
[Picea sitchensis] gi|116790505|gb|ABK25640.1| unknown
[Picea sitchensis] gi|148906289|gb|ABR16300.1| unknown
[Picea sitchensis]
Length = 69
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
M+DEE VDPK +EE+CKPKCV+P +
Sbjct: 1 MSDEEPVDPKHEIEESCKPKCVKPLL 26
Score = 35.8 bits (81), Expect(2) = 1e-06
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW+CVD CAA K+F+KLK
Sbjct: 52 YWRCVDTCAAHKIFEKLK 69
>ref|XP_006303490.1| hypothetical protein CARUB_v10010817mg [Capsella rubella]
gi|482572201|gb|EOA36388.1| hypothetical protein
CARUB_v10010817mg [Capsella rubella]
Length = 69
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MAD+E+VDPK YLEE+CKPKCV+P +
Sbjct: 1 MADDEVVDPKKYLEESCKPKCVKPLL 26
Score = 29.3 bits (64), Expect(2) = 2e-06
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
+W C+D+C A KLF KL+
Sbjct: 52 FWFCIDKCVAPKLFAKLR 69
>ref|NP_001065827.1| Os11g0162200 [Oryza sativa Japonica Group]
gi|113644531|dbj|BAF27672.1| Os11g0162200 [Oryza sativa
Japonica Group]
Length = 69
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRP 333
MADEE VDPK YLEE CKP+CV+P
Sbjct: 1 MADEEPVDPKKYLEERCKPQCVKP 24
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KL +KLK
Sbjct: 52 YWSCIDKCVAPKLLEKLK 69
>ref|XP_002300924.2| hypothetical protein POPTR_0002s06990g [Populus trichocarpa]
gi|550344445|gb|EEE80197.2| hypothetical protein
POPTR_0002s06990g [Populus trichocarpa]
Length = 112
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -2
Query: 401 ADEELVDPKLYLEETCKPKCVRPXI 327
ADEELVD K YLE++CKPKCV+P +
Sbjct: 45 ADEELVDQKKYLEDSCKPKCVKPLL 69
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW C+D+C A KLF KLK
Sbjct: 95 YWYCIDKCVAPKLFSKLK 112
>ref|XP_004287060.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Fragaria vesca
subsp. vesca]
Length = 69
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 404 MADEELVDPKLYLEETCKPKCVRPXI 327
MADEE VD K YLE++CKPKCV+P +
Sbjct: 1 MADEEPVDQKKYLEDSCKPKCVKPFL 26
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 327 YWKCVDQCAALKLFDKLK 274
YW CVD+C A KLF KLK
Sbjct: 52 YWSCVDKCVAPKLFTKLK 69