BLASTX nr result

ID: Zingiber24_contig00009874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00009874
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001168582.1| uncharacterized protein LOC100382366 [Zea ma...    60   3e-07
ref|XP_004982143.1| PREDICTED: glycine, alanine and asparagine-r...    59   1e-06

>ref|NP_001168582.1| uncharacterized protein LOC100382366 [Zea mays]
           gi|223949345|gb|ACN28756.1| unknown [Zea mays]
           gi|414872175|tpg|DAA50732.1| TPA: hypothetical protein
           ZEAMMB73_804328 [Zea mays]
          Length = 452

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
 Frame = -3

Query: 561 AALGKYGASCQVQFSESMTVPSSMVQSEDVEVPIVPQEDEQQEFQLSEVHPDHEV---SH 391
           AA+  +GA   VQ  ESM V     ++ +    +   ++E+++ Q +E++ DH V    H
Sbjct: 255 AAVASFGAG-GVQVQESMVVSPQAPEAVEESQAVEGHKNEKEDSQATEIYNDHPVVDSEH 313

Query: 390 VDEQLNMGATD--PPVSYGAVVASNQEQENQKVDLEDLNLREVEQREHQYNSRRIYHNNQ 217
           V++++ +  TD  PP        + QEQE    D++D      EQ++ Q+  RR Y N +
Sbjct: 314 VEDEVLVHPTDEVPPAE------TEQEQETFDADVKDQ-----EQKDQQFIQRRSYQNQR 362

Query: 216 GGIRG------PDNXXXXXXXXXXXXXXXXXXXXXXXXYHDSSYSKHYYNP----KGRGG 67
           GG RG      P+                              Y   YY P    +GRGG
Sbjct: 363 GGGRGGSRRGYPNGRGGRGGRGGGYQNGRGGYQNGRGGAGGYYYESGYYQPRNYNRGRGG 422

Query: 66  QSSCA-ANYTDHG----SHAPSNLDL 4
           +S    + Y  HG     H P +++L
Sbjct: 423 RSGGGNSYYNSHGGGAQGHHPGSVEL 448


>ref|XP_004982143.1| PREDICTED: glycine, alanine and asparagine-rich protein-like
           [Setaria italica]
          Length = 460

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = -3

Query: 561 AALGKYGASCQVQFSESMTVPSSMVQSEDVEVPIVPQEDEQQEFQLSEVHPDH-----EV 397
           AA+G YGA   VQ  ESM V     +  +  + +   + E++E Q +E++ DH     + 
Sbjct: 255 AAVGNYGAG-GVQAQESMVVSPQASEEAEESLAVEGHKGEKEEPQATEIYIDHQAPAVDA 313

Query: 396 SHVDEQLNMGATDPPVSYGAVVASNQEQENQKVDLEDLNLREVEQREHQYNSRRIYHNNQ 217
            HVD+   +  TD   S      +  EQE    D+ED      EQ++ Q+  RR Y N +
Sbjct: 314 QHVDDDALVNPTDEAPS------AEAEQERFDADVED-----QEQKDQQFIQRRSYQNQR 362

Query: 216 GGIRG 202
           GG RG
Sbjct: 363 GGGRG 367


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