BLASTX nr result
ID: Zingiber24_contig00009824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00009824
(4445 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 1998 0.0
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 1991 0.0
gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus pe... 1988 0.0
gb|EOY22974.1| Cleavage and polyadenylation specificity factor 1... 1974 0.0
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 1956 0.0
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 1955 0.0
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 1944 0.0
gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus... 1943 0.0
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 1939 0.0
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 1939 0.0
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 1938 0.0
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec... 1937 0.0
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 1935 0.0
ref|XP_002318462.2| cleavage and polyadenylation specificity fac... 1911 0.0
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 1909 0.0
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A... 1904 0.0
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec... 1904 0.0
ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Caps... 1861 0.0
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 1860 0.0
gb|AAN41460.1| putative cleavage and polyadenylation specificity... 1852 0.0
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 1998 bits (5175), Expect = 0.0
Identities = 986/1342 (73%), Positives = 1150/1342 (85%), Gaps = 5/1342 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+MT+L G +++ RRDSI+LAFQDAKI+VLE+DDS HGLRTSSMHCFEGP+W +LKRG
Sbjct: 115 TMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGH 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRCSGVL+YGLQMIILKA+Q G GLVGD+E +SG AVS R+ESSY
Sbjct: 175 ESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSY 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VI+LRDLDMKHVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VISLRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLL VPSPIGGV+VI AN+IHY+SQS SC+L LN++ + ++S E
Sbjct: 295 HPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F+VELDAAN TWLS DVA+ S+KTGELLLLTL YDGRVV RL+L +S+ASVLTSG
Sbjct: 355 MPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSG 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSSLSSANMKDEIADSEGELHLAKRLCRTPSDAL 1081
IA IG+S FFL SRLGDSLL+Q++S + S+++K+E+ D EG++ AKRL ++ SDAL
Sbjct: 415 IAAIGNSLFFLGSRLGDSLLVQFTS----ILSSSVKEEVGDIEGDVPSAKRLRKSSSDAL 470
Query: 1082 LEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTAK 1258
++ + EELSLYG A N++E +QK FSF VRDS INVGPL+DF+YGLRINADP ATG AK
Sbjct: 471 QDMVNGEELSLYGSAPNSTETSQKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAK 530
Query: 1259 QSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM- 1435
QSNYELVCCSGHGKNGALC+LQQSIRPE+ITEVELPGCKGIWTVYHK +RGH AD++KM
Sbjct: 531 QSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMA 590
Query: 1436 -DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYAR 1612
DDEYHAYLIISLE+RTMVLETAD LGEVTESVDYYVQG TI+AGNLFGRRRV+Q+YAR
Sbjct: 591 TKDDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYAR 650
Query: 1613 GARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXXX 1792
GARILDG++MTQ++P SE+ V+SVSIADPYVLL+MSDG+IQLL+GD
Sbjct: 651 GARILDGAFMTQDLPI----------SESSTVLSVSIADPYVLLRMSDGNIQLLVGDPST 700
Query: 1793 XXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYNDQ 1972
F SS + I AC LYHDKG EPWLRKTSTDAWLSTGI EAIDG DG DQ
Sbjct: 701 CTVSINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQ 760
Query: 1973 GDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSEE 2152
GDIYC+V YESG LE FDV NF CVFSV+ F+ G +HL+D EPS Q K SEE
Sbjct: 761 GDIYCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEE 820
Query: 2153 -SNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFED 2329
++ KE + ++K+VELAM RW GQ++RPFL IL+DGT+LCYHAYLYEG E PK E+
Sbjct: 821 EADQGRKENAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEE 880
Query: 2330 AVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLS 2509
AVS Q S S++S SRLRNLRFVRVP+D TRE++ + PR+T+FKN+GG QGLFLS
Sbjct: 881 AVSAQNSLSISNVSASRLRNLRFVRVPLDTYTREEALSGTTSPRMTVFKNIGGCQGLFLS 940
Query: 2510 GSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNY 2689
GSRP WFMV RER+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTS+G+LKICQLP++ +Y
Sbjct: 941 GSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSY 1000
Query: 2690 DNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDNV 2869
DNYWPV KIPL+GTPHQVTY+AE+NLYPLI+S V++PLN VL S+ DQ+ H +NDN+
Sbjct: 1001 DNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNL 1060
Query: 2870 NSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENET 3049
+SD+L ++Y++DEFE+R+LEP KSG W+TRA IPMQ+SENALTVRVVTLFNT TKENET
Sbjct: 1061 SSDELHRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENET 1120
Query: 3050 LLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLLV 3229
LLAIGTAYVQGEDVAARGR+LL++ KN D+SQN+VSE+YSKELKGA+SA+ASLQGHLL+
Sbjct: 1121 LLAIGTAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLI 1180
Query: 3230 ASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQL 3406
ASGPKI LHKWTGTELNG+AF+DA PL+VVSLNIVKNFILLGDIH+SIYFL+WKEQGAQL
Sbjct: 1181 ASGPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQL 1240
Query: 3407 SLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFH 3586
+LLAKDF SLD +ATEFLIDGSTLSL+VSDD+KNIQIFYYAPK ESWKGQKLLSRAEFH
Sbjct: 1241 NLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFH 1300
Query: 3587 AGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQT 3766
GAHVTKFLRLQML SSDRT+ T GSDKTNRFALLF +LDGSIGCIAPLDELTFRRLQ+
Sbjct: 1301 VGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQS 1360
Query: 3767 LQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQ 3946
LQ+KLVD VPH GLNP+SFRQFRSNGKAHRPGPDN+VDCELL YEMLP ++QLEIAQQ
Sbjct: 1361 LQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQ 1420
Query: 3947 IVTTRSQILSNLSDLSLGTSFL 4012
I TTR QILSNL+DLSLGTSFL
Sbjct: 1421 IGTTRMQILSNLNDLSLGTSFL 1442
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 1991 bits (5158), Expect = 0.0
Identities = 986/1348 (73%), Positives = 1150/1348 (85%), Gaps = 11/1348 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+MT+L G +++ RRDSI+LAFQDAKI+VLE+DDS HGLRTSSMHCFEGP+W +LKRG
Sbjct: 115 TMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGH 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRCSGVL+YGLQMIILKA+Q G GLVGD+E +SG AVS R+ESSY
Sbjct: 175 ESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSY 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VI+LRDLDMKHVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VISLRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLL VPSPIGGV+VI AN+IHY+SQS SC+L LN++ + ++S E
Sbjct: 295 HPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F+VELDAAN TWLS DVA+ S+KTGELLLLTL YDGRVV RL+L +S+ASVLTSG
Sbjct: 355 MPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSG 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSSLSSANMKDEIADSEGELHLAKRLCRTPSDAL 1081
IA IG+S FFL SRLGDSLL+Q++S + S+++K+E+ D EG++ AKRL ++ SDAL
Sbjct: 415 IAAIGNSLFFLGSRLGDSLLVQFTS----ILSSSVKEEVGDIEGDVPSAKRLRKSSSDAL 470
Query: 1082 LEVASYEELSLYG-ATNTSEIAQ------KFFSFIVRDSLINVGPLRDFSYGLRINADPN 1240
++ + EELSLYG A N++E +Q K FSF VRDS INVGPL+DF+YGLRINADP
Sbjct: 471 QDMVNGEELSLYGSAPNSTETSQVEAQVGKTFSFSVRDSFINVGPLKDFAYGLRINADPK 530
Query: 1241 ATGTAKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVA 1420
ATG AKQSNYELVCCSGHGKNGALC+LQQSIRPE+ITEVELPGCKGIWTVYHK +RGH A
Sbjct: 531 ATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNA 590
Query: 1421 DTSKM--DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRV 1594
D++KM DDEYHAYLIISLE+RTMVLETAD LGEVTESVDYYVQG TI+AGNLFGRRRV
Sbjct: 591 DSTKMATKDDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRV 650
Query: 1595 IQIYARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLL 1774
+Q+YARGARILDG++MTQ++P SE+ V+SVSIADPYVLL+MSDG+IQLL
Sbjct: 651 VQVYARGARILDGAFMTQDLPI----------SESSTVLSVSIADPYVLLRMSDGNIQLL 700
Query: 1775 IGDXXXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHD 1954
+GD F SS + I AC LYHDKG EPWLRKTSTDAWLSTGI EAIDG D
Sbjct: 701 VGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGAD 760
Query: 1955 GLYNDQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSK 2134
G DQGDIYC+V YESG LE FDV NF CVFSV+ F+ G +HL+D EPS Q
Sbjct: 761 GAAQDQGDIYCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVM 820
Query: 2135 GKVSEE-SNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEG 2311
K SEE ++ KE + ++K+VELAM RW GQ++RPFL IL+DGT+LCYHAYLYEG E
Sbjct: 821 SKNSEEEADQGRKENAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPES 880
Query: 2312 APKFEDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGY 2491
PK E+AVS Q S S++S SRLRNLRFVRVP+D TRE++ + PR+T+FKN+GG
Sbjct: 881 TPKTEEAVSAQNSLSISNVSASRLRNLRFVRVPLDTYTREEALSGTTSPRMTVFKNIGGC 940
Query: 2492 QGLFLSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQL 2671
QGLFLSGSRP WFMV RER+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTS+G+LKICQL
Sbjct: 941 QGLFLSGSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQL 1000
Query: 2672 PSLCNYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHM 2851
P++ +YDNYWPV KIPL+GTPHQVTY+AE+NLYPLI+S V++PLN VL S+ DQ+ H
Sbjct: 1001 PAVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQ 1060
Query: 2852 NDNDNVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTM 3031
+NDN++SD+L ++Y++DEFE+R+LEP KSG W+TRA IPMQ+SENALTVRVVTLFNT
Sbjct: 1061 LENDNLSSDELHRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTT 1120
Query: 3032 TKENETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASL 3211
TKENETLLAIGTAYVQGEDVAARGR+LL++ KN D+SQN+VSE+YSKELKGA+SA+ASL
Sbjct: 1121 TKENETLLAIGTAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASL 1180
Query: 3212 QGHLLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWK 3388
QGHLL+ASGPKI LHKWTGTELNG+AF+DA PL+VVSLNIVKNFILLGDIH+SIYFL+WK
Sbjct: 1181 QGHLLIASGPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWK 1240
Query: 3389 EQGAQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLL 3568
EQGAQL+LLAKDF SLD +ATEFLIDGSTLSL+VSDD+KNIQIFYYAPK ESWKGQKLL
Sbjct: 1241 EQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLL 1300
Query: 3569 SRAEFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELT 3748
SRAEFH GAHVTKFLRLQML SSDRT+ T GSDKTNRFALLF +LDGSIGCIAPLDELT
Sbjct: 1301 SRAEFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELT 1360
Query: 3749 FRRLQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQ 3928
FRRLQ+LQ+KLVD VPH GLNP+SFRQFRSNGKAHRPGPDN+VDCELL YEMLP ++Q
Sbjct: 1361 FRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQ 1420
Query: 3929 LEIAQQIVTTRSQILSNLSDLSLGTSFL 4012
LEIAQQI TTR QILSNL+DLSLGTSFL
Sbjct: 1421 LEIAQQIGTTRMQILSNLNDLSLGTSFL 1448
>gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 1988 bits (5149), Expect = 0.0
Identities = 976/1343 (72%), Positives = 1143/1343 (85%), Gaps = 6/1343 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M +LS G + + RRDSI+L F+DAKI+VLE+DDS HGLRTSSMHCFEGP+W +L+RGR
Sbjct: 117 TMAVLSSGGGDGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGR 176
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC +L+YGLQMIILKA+Q G GLVGDD+ SGGA+S RIESSY
Sbjct: 177 ESFARGPLVKVDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSY 236
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
++NLRD+DMKHVKDFTF+HGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 237 IVNLRDMDMKHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 296
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI AN+IHY+SQS SC+L LNS+ + ++S E
Sbjct: 297 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQE 356
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F VELD AN TWL DVA+ S+KTGELLLLTL+YDGRVVQRL+L +SKASVLTSG
Sbjct: 357 MPRSSFTVELDTANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSG 416
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTS-SLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I K+G+S FFL SRLGDSLL+Q++ G S+ S++MKDE+ D EG+ LAKRL + SDA
Sbjct: 417 ITKVGNSLFFLGSRLGDSLLVQFTCGVGGSVLSSDMKDEVGDIEGDAPLAKRLRMSSSDA 476
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG A N +E AQK FSF VRDSLINVGPL+DFSYGLRINAD NATG A
Sbjct: 477 LQDMVSGEELSLYGSAPNNAESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIA 536
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK +RGH AD+SK+
Sbjct: 537 KQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKNARGHNADSSKI 596
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
DDE+HAYLIISLE RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRV+Q+Y
Sbjct: 597 AASDDEFHAYLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYE 656
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ++ FG NS++ S SE+ V+SVSI DPYVLL+MSDG I+LL+GD
Sbjct: 657 RGARILDGSFMTQDLSFGTSNSEMGSGSESSTVLSVSIVDPYVLLRMSDGGIRLLVGDPS 716
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
F SS + I AC LYHDKG EPWLRKTSTDAWLSTGI EAIDG DG+ +D
Sbjct: 717 LCTVSTSIPAAFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIDEAIDGADGVSHD 776
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSE 2149
QGD+YC+VCYESG+LE FDV NF CVFSV+ F+ G +HL+D R+P Q K SE
Sbjct: 777 QGDVYCVVCYESGSLEIFDVPNFNCVFSVDKFVSGNAHLIDTLMRDPPKDPQKLINKSSE 836
Query: 2150 ESNGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
E +G KE ++MK+VELAM RW GQ++RPFL IL+DG +LCYHAYL+EG E A K E
Sbjct: 837 EVSGQGRKENIQNMKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPETASKTE 896
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+ S Q + S++S SRLRNLRFVRVP+D ++D+SN + R+TIFKN+ GYQGLFL
Sbjct: 897 DSASAQNTTGVSNLSASRLRNLRFVRVPLDTYAKKDTSNETSCQRMTIFKNIAGYQGLFL 956
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
SGSRPAWFMV RER+R+HPQLCDGS+VA TVLHNVNCNHGLIYVTS+G LKICQLP + +
Sbjct: 957 SGSRPAWFMVFRERLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITS 1016
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YDNYWPV KIPL+GTPHQVTY+AE+NLYPLI+S V +PLNQVL S+ DQ++ H +N N
Sbjct: 1017 YDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHN 1076
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
++SD+L + Y++DEFEIRI+EP KSGG W+T+A IPMQTSENALTVRVVTLFNT TKENE
Sbjct: 1077 LSSDELHRTYSVDEFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENE 1136
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLAIGTAYVQGEDVA RGR+LL++ K+ D++Q +VSEVYSKELKGA+SA+ASLQGHLL
Sbjct: 1137 TLLAIGTAYVQGEDVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISALASLQGHLL 1196
Query: 3227 VASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQ 3403
+ASGPKI LHKW GTELNG+AF+D PL+VVSLNIVKNFILLGD+HKSIYFL+WKEQGAQ
Sbjct: 1197 IASGPKIILHKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGAQ 1256
Query: 3404 LSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEF 3583
L+LLAKDF +LD +ATEFLIDGSTLSLVV+D++KNIQIFYYAPK ESWKGQKLLSRAEF
Sbjct: 1257 LTLLAKDFGNLDCFATEFLIDGSTLSLVVADEQKNIQIFYYAPKMSESWKGQKLLSRAEF 1316
Query: 3584 HAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQ 3763
H G HVTKFLRLQMLSTSSDRT PGSDKTNR+ALLF +LDGSIGCIAPLDELTFRRLQ
Sbjct: 1317 HVGTHVTKFLRLQMLSTSSDRTGTNPGSDKTNRYALLFGTLDGSIGCIAPLDELTFRRLQ 1376
Query: 3764 TLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQ 3943
+LQ+KLVD V H GLNP++FRQF+SNGKAHRPGPD +VDCELLS YEMLPL++QLEIA
Sbjct: 1377 SLQKKLVDAVHHVAGLNPRAFRQFQSNGKAHRPGPDTIVDCELLSHYEMLPLEEQLEIAN 1436
Query: 3944 QIVTTRSQILSNLSDLSLGTSFL 4012
QI TTRSQI SNL+DLS+GTSFL
Sbjct: 1437 QIGTTRSQIFSNLNDLSIGTSFL 1459
>gb|EOY22974.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 1974 bits (5115), Expect = 0.0
Identities = 982/1344 (73%), Positives = 1133/1344 (84%), Gaps = 7/1344 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
SM +LS+G + + RRDSI+LAF+DAKI+VLE+DDS HGLRT+SMHCFEGP+W +LKRGR
Sbjct: 115 SMAVLSIGGGDGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+Y LQMIILKA+Q G G VG+D+ SGGAVS R+ESSY
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSY 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLD+KH+KDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 IINLRDLDVKHIKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LN++ + ++S +
Sbjct: 295 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNNYAISVDNSQD 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F+VELDAAN TWL DVA+ S+KTGELLLLTLIYDGRVVQRL+L +SKASVLTS
Sbjct: 355 LPRSNFSVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYS--SGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q+S SG S+L S +K+E+ D EG++ LAKRL R+ SD
Sbjct: 415 ITTIGNSLFFLGSRLGDSLLVQFSGGSGVSALPSG-LKEEVGDIEGDVPLAKRLRRSSSD 473
Query: 1076 ALLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
AL ++ EELSLYG A N +E AQK F F VRDSL NVGPL+DFSYGLRINAD NATG
Sbjct: 474 ALQDMVGGEELSLYGSAPNNTESAQKTFLFAVRDSLTNVGPLKDFSYGLRINADVNATGI 533
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
AKQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVEL GCKGIWTVYHK +R H AD SK
Sbjct: 534 AKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRSHSADLSK 593
Query: 1433 M--DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
+ DDDEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG TIAAGNLFGRRRV+Q+Y
Sbjct: 594 VTDDDDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVY 653
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDGS+MTQE+ NS+ S SE V+SVSIADPYVLL+M+DGSI LL+GD
Sbjct: 654 ERGARILDGSFMTQELSIPSPNSESSPGSENSTVISVSIADPYVLLRMTDGSILLLVGDP 713
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
F S + + AC LYHDKG EPWLRK STDAWLSTG+ E+IDG DG +
Sbjct: 714 ATCTVSINTPTAFEGSKKMVSACTLYHDKGPEPWLRKASTDAWLSTGVGESIDGADGGPH 773
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIYC+VCYESG LE FDV NF CVFS+E F G++ L+D Y E S + K S
Sbjct: 774 DQGDIYCVVCYESGALEIFDVPNFNCVFSMEKFASGRTRLVDAYTLESSKDSEKVINKSS 833
Query: 2147 EESNGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKF 2323
EE G KE +++K+VELAM RW ++RPFL IL+DGT+LCYHAYL+EG E A K
Sbjct: 834 EELTGQGRKENVQNLKVVELAMQRWSANHSRPFLFGILTDGTILCYHAYLFEGSENASKV 893
Query: 2324 EDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLF 2503
ED+V Q S S+I+ SRLRNLRF+R+P+D TRE+ SN RITIFKN+ GYQG F
Sbjct: 894 EDSVVAQNSVGLSNINASRLRNLRFIRIPLDAYTREEMSNGTLSQRITIFKNISGYQGFF 953
Query: 2504 LSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLC 2683
LSGSRPAWFMV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+G LKICQ+PS
Sbjct: 954 LSGSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSAS 1013
Query: 2684 NYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDND 2863
NYDNYWPV KIPLRGTPHQVTY+AERNLYP+I+S V +P+NQVL S+ DQ++ H DN
Sbjct: 1014 NYDNYWPVQKIPLRGTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNH 1073
Query: 2864 NVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKEN 3043
N++SD+LQ+ YT+DEFE+RILEP KSGG WET+A IPMQ+SENALTVRVVTLFNT TKEN
Sbjct: 1074 NLSSDELQRTYTVDEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKEN 1133
Query: 3044 ETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHL 3223
E+LLAIGTAY+QGEDVAARGR++L + +N D+ QN+VSEVYSKELKGA+SA+ASLQGHL
Sbjct: 1134 ESLLAIGTAYIQGEDVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISALASLQGHL 1193
Query: 3224 LVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGA 3400
L+ASGPKI LH WTG+ELNGIAFYDA PL+VVSLNIVKNFILLGD+HKSIYFL+WKEQGA
Sbjct: 1194 LIASGPKIILHNWTGSELNGIAFYDAPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGA 1253
Query: 3401 QLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAE 3580
QLSLLAKDF SLD +ATEFLIDGSTLSL+VSD++KNIQIFYYAPK ESWKGQKLLSRAE
Sbjct: 1254 QLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDEQKNIQIFYYAPKMSESWKGQKLLSRAE 1313
Query: 3581 FHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRL 3760
FH GAHVTKFLRLQMLSTSSDRT+ T GSDKTNRFALLF +LDGSIGCIAPLDELTFRRL
Sbjct: 1314 FHVGAHVTKFLRLQMLSTSSDRTSATAGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRL 1373
Query: 3761 QTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIA 3940
Q+LQ+KLVD VPH GLNP+SFRQF SNGKAHRPGPD++VDCELL YEMLPL++QL+IA
Sbjct: 1374 QSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLDIA 1433
Query: 3941 QQIVTTRSQILSNLSDLSLGTSFL 4012
QI TTRSQILSNL+DL+LGTSFL
Sbjct: 1434 HQIGTTRSQILSNLNDLTLGTSFL 1457
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 1956 bits (5068), Expect = 0.0
Identities = 982/1343 (73%), Positives = 1126/1343 (83%), Gaps = 6/1343 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M +LS+G + + RRDSIML F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGR
Sbjct: 111 TMAVLSIGGGDVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGR 170
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
E FA+GPV++ DP GRC GVLIY LQMIILKA Q G GLVG+D+ S GAV+ RIESSY
Sbjct: 171 EQFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSY 230
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDM+HVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 231 MINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 290
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LNS+ + +SS E
Sbjct: 291 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQE 350
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F VELDAAN TWL DVA+ S+KTGELLLLTL+YDGRVVQRL+L +SKASVL+SG
Sbjct: 351 IPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSG 410
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTS-SLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I IG+S FFLASRLGDS+L+Q+S G+ S+ S+N+K+E+ D E + +KRL R+PSDA
Sbjct: 411 ITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEADAP-SKRLRRSPSDA 469
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG A N +E AQK FSF VRDSLINVGPL+DFSYGLRINAD NATG A
Sbjct: 470 LQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIA 529
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNG+LCVL+QSIRPE+ITEVELPGCKGIWTVYHK +R H AD+SKM
Sbjct: 530 KQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKM 589
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
DDDEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG T+AAGNLFGR RVIQ+Y
Sbjct: 590 ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYE 649
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ+V FG N + S S++ + +SVSIADP+VLL+MSDGSI+LLIGD
Sbjct: 650 RGARILDGSFMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRMSDGSIRLLIGDPS 709
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
F SS + +C LYHDKG EPWLRKTSTDAWLSTG+ E IDG DG D
Sbjct: 710 TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGETIDGTDGAAQD 769
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREP-SATFQGSKGKVS 2146
GDIYC+VC+++G LE FDV NF CVFSVENF+ GKSHL+D +E + QG + V
Sbjct: 770 HGDIYCVVCFDNGNLEIFDVPNFNCVFSVENFMSGKSHLVDALMKEVLKDSKQGDRDGVI 829
Query: 2147 EESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
+ KE DMK+VELAM RW GQ++RPFL ILSDGT+LCYHAYLYE + K E
Sbjct: 830 NQGR---KENIPDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDSTSKVE 886
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+ S S SS + SRLRNLRFVRVP+D RED+SN +ITIFKN+G Y+G FL
Sbjct: 887 DSASAGGSIGLSSTNVSRLRNLRFVRVPLDAYAREDTSNGPPCQQITIFKNIGSYEGFFL 946
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
SGSRPAW MV RER+RVHPQLCDGSIVAFTVLHNVNCN GLIYVTS+G LKICQLPS N
Sbjct: 947 SGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNQGLIYVTSQGVLKICQLPSGSN 1006
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YD+YWPV KIPL+ TPHQVTY+AE+NLYPLI+SF V++PLNQV+ S+ DQDI H N++ N
Sbjct: 1007 YDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVI-SLVDQDINHQNESQN 1065
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
+N D+ + Y IDEFE+RI+EP KSGG W+T+A IPMQ+SENALTVR+VTL NT +KENE
Sbjct: 1066 MNPDEQNRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLVNTTSKENE 1125
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLAIGTAYVQGEDVAARGR+LL++ KN D+ Q +VSEVYSKELKGA+SA+ASLQGHLL
Sbjct: 1126 TLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHLL 1185
Query: 3227 VASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQ 3403
+ASGPKI LHKW GTELNGIAF+DA PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQ
Sbjct: 1186 IASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQ 1245
Query: 3404 LSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEF 3583
LSLLAKDF SLD +ATEFLIDGSTLSL+VSDD +NIQIFYYAPK ESWKGQKLLSRAEF
Sbjct: 1246 LSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEF 1305
Query: 3584 HAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQ 3763
H GAHVTKFLRLQMLST SDR PGSDKTNRFALLF +LDGSIGCIAPLDE+TFRRLQ
Sbjct: 1306 HVGAHVTKFLRLQMLST-SDRAGAVPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQ 1364
Query: 3764 TLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQ 3943
+LQRKLVD VPH GLNP++FR FRSNGKAHRPGPD++VDCELL YEMLPL++QLEIA
Sbjct: 1365 SLQRKLVDAVPHVAGLNPRAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAH 1424
Query: 3944 QIVTTRSQILSNLSDLSLGTSFL 4012
Q+ TTRSQILSNLSDLSLGTSFL
Sbjct: 1425 QVGTTRSQILSNLSDLSLGTSFL 1447
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 1955 bits (5064), Expect = 0.0
Identities = 982/1343 (73%), Positives = 1129/1343 (84%), Gaps = 6/1343 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M +LS+G + + +RDSI+L F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGR
Sbjct: 113 TMAVLSIGGGDVSRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGR 172
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
E FA+GPV++ DP GRC GVLIY LQMIILKA QVG GLVGDD+ S GAV+ RIESSY
Sbjct: 173 EQFARGPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAFGSSGAVAARIESSY 232
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDM+HVKDFTFV+GYIEPV+V+LHE+E TWAGR+SW HHTCMISALSI+T+LKQ
Sbjct: 233 MINLRDLDMRHVKDFTFVYGYIEPVMVILHERELTWAGRVSWTHHTCMISALSISTTLKQ 292
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LN++ + +SS E
Sbjct: 293 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNNYAVTLDSSQE 352
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F VELDAAN TWL DVA+ S+KTGELLLL L+YDGRVVQRL+L +SKASVL+SG
Sbjct: 353 IPRSSFNVELDAANATWLLSDVALLSTKTGELLLLMLVYDGRVVQRLDLSKSKASVLSSG 412
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTS-SLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I IG+S FFLASRLGDS+L+Q+S G+ S+ S+N+K+E+ D E + +KRL R+PSDA
Sbjct: 413 ITTIGNSLFFLASRLGDSMLVQFSCGSGVSMMSSNLKEEVGDIEVDAP-SKRLRRSPSDA 471
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG ATN +E AQK FSF VRDSLINVGPL+DFSYGLRINAD NATG A
Sbjct: 472 LQDMVSGEELSLYGSATNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIA 531
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNG+LCVL+QSIRPE+ITEVELPGCKGIWTVYHK +R H AD+SKM
Sbjct: 532 KQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKM 591
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
DDDEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG T+AAGNLFGRRRVIQ+Y
Sbjct: 592 ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 651
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ+V FG NS+ S SE+ + +SVSIADP+VLL+MSDGSI+LLIGD
Sbjct: 652 RGARILDGSFMTQDVSFGASNSESGSASESAIALSVSIADPFVLLRMSDGSIRLLIGDPS 711
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
F SS + +C LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG D
Sbjct: 712 TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQD 771
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREP-SATFQGSKGKVS 2146
GDIYC+VC+++G LE FD+ NF CVFSVENF+ GKSHL+D +E + QG + V
Sbjct: 772 HGDIYCVVCFDNGNLEIFDIPNFNCVFSVENFMSGKSHLVDALMKEVLKDSKQGDRDGVV 831
Query: 2147 EESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
+ K+ +MK+VELAM RW GQ++RPFL ILSDGT+LCYHAYLYE +G K E
Sbjct: 832 NQGR---KDNIPNMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDGTSKVE 888
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+ S S SS + SRLRNLRFVRVP+D RED+SN +ITIFKN+G YQG FL
Sbjct: 889 DSASAGGSIGLSSTNVSRLRNLRFVRVPLDAYPREDTSNGSPCQQITIFKNIGSYQGFFL 948
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
SGSRPAW MV RER+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTS+G LKICQLPS N
Sbjct: 949 SGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSN 1008
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YD+YWPV KIPL+ TPHQVTY+AE+NLYPLI+SF V++PLNQV+ S+ DQD H N++ N
Sbjct: 1009 YDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVI-SLVDQDFNHQNESQN 1067
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
+N D+ + Y IDEFE+RI+EP KSGG W+T+A IPMQ+SENALTVR+VTL NT +KENE
Sbjct: 1068 MNPDEQNRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENE 1127
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLAIGTAYVQGEDVAARGR+LL++ K D+ Q +VSEVYSKELKGA+SA+ASLQGHLL
Sbjct: 1128 TLLAIGTAYVQGEDVAARGRILLFSLGKITDNPQTLVSEVYSKELKGAISALASLQGHLL 1187
Query: 3227 VASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQ 3403
+ASGPKI LHKW GTELNGIAF+DA PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQ
Sbjct: 1188 IASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQ 1247
Query: 3404 LSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEF 3583
LSLLAKDF SLD +ATEFLIDGSTLSL+VSDD +NIQIFYYAPK ESWKGQKLLSRAEF
Sbjct: 1248 LSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEF 1307
Query: 3584 HAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQ 3763
H GAHVTKFLRLQMLST SDR PGSDKTNRFALLF +LDGSIGCIAPLDE+TFRRLQ
Sbjct: 1308 HVGAHVTKFLRLQMLST-SDRAGSVPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQ 1366
Query: 3764 TLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQ 3943
+LQRKLVD VPH GLNP++FR FRSNGKAHRPGPD++VDCELL YEMLPL++QLEIA
Sbjct: 1367 SLQRKLVDAVPHVAGLNPRAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAN 1426
Query: 3944 QIVTTRSQILSNLSDLSLGTSFL 4012
QI TTRSQILSNLSDLSLGTSFL
Sbjct: 1427 QIGTTRSQILSNLSDLSLGTSFL 1449
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 1944 bits (5036), Expect = 0.0
Identities = 967/1344 (71%), Positives = 1126/1344 (83%), Gaps = 7/1344 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKRGR
Sbjct: 115 SLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIESS+
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSH 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS E
Sbjct: 295 HPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F+VELDAA+ TWL DVA+ S+KTG+L+LLT++YDGRVVQRL+L ++ SVLTS
Sbjct: 355 LPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYS--SGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q++ SGTS LSS +K+E D E + KRL R+ SD
Sbjct: 415 ITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSG-LKEEFGDIEADAPSTKRLRRSSSD 473
Query: 1076 ALLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
AL ++ + EELSLYG A+N +E AQK FSF VRDSL+N+GPL+DFSYGLRINAD +ATG
Sbjct: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
+KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH AD+S+
Sbjct: 534 SKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSR 593
Query: 1433 MD--DDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
M DDEYHAYLIISLE RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRVIQ++
Sbjct: 594 MAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVF 653
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDGSYMTQ++ FG NS+ S SE V+SVSIADPYVLL MSDGSI+LL+GD
Sbjct: 654 ERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDP 713
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
SS +P+ +C LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG
Sbjct: 714 STCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPL 773
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIY +VCYESG LE FDV NF CVF+V+ F+ G++H++D Y RE + S
Sbjct: 774 DQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSS 833
Query: 2147 EESNGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKF 2323
EE G KE MK+VELAM RW G ++RPFL AIL+DGT+LCY AYL+EG E K
Sbjct: 834 EEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGPENTSKS 893
Query: 2324 EDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLF 2503
+D VS +S S++S SRLRNLRF R+P+D TRE++ + RITIFKN+ G+QG F
Sbjct: 894 DDPVSTSRSLSVSNVSASRLRNLRFARIPLDAYTREETPHGAPCQRITIFKNISGHQGFF 953
Query: 2504 LSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLC 2683
LSGSRP W MV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+G LKICQLPS
Sbjct: 954 LSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGS 1013
Query: 2684 NYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDND 2863
YDNYWPV KIPL+ TPHQ+TY+AE+NLYPLI+S V++PLNQVL + DQ++ H DN
Sbjct: 1014 TYDNYWPVQKIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNH 1073
Query: 2864 NVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKEN 3043
N++S DL + YT++E+E+RILEP ++GG W+TRA IPMQ+SENALTVRVVTLFNT TKEN
Sbjct: 1074 NLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKEN 1133
Query: 3044 ETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHL 3223
ETLLAIGTAYVQGEDVAARGR+LL++ +N D+ QN+V+EVYSKELKGA+SA+ASLQGHL
Sbjct: 1134 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHL 1193
Query: 3224 LVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGA 3400
L+ASGPKI LHKWTGTELNGIAFYDA PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQGA
Sbjct: 1194 LIASGPKIILHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGA 1253
Query: 3401 QLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAE 3580
QL+LLAKDF SLD +ATEFLIDGSTLSLVVSD++KNIQIFYYAPK ESWKGQKLLSRAE
Sbjct: 1254 QLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAE 1313
Query: 3581 FHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRL 3760
FH GAHVTKFLRLQML+TSSDRT PGSDKTNRFALLF +LDGSIGCIAPLDELTFRRL
Sbjct: 1314 FHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRL 1373
Query: 3761 QTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIA 3940
Q+LQ+KLVD VPH GLNP+SFRQF SNGKAHRPGPD++VDCELLS YEMLPL++QLEIA
Sbjct: 1374 QSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEIA 1433
Query: 3941 QQIVTTRSQILSNLSDLSLGTSFL 4012
Q TTRSQILSNL+DL+LGTSFL
Sbjct: 1434 HQTGTTRSQILSNLNDLALGTSFL 1457
>gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
Length = 1445
Score = 1943 bits (5033), Expect = 0.0
Identities = 969/1343 (72%), Positives = 1128/1343 (83%), Gaps = 6/1343 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M +LS+G + + +RDSI+L F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGR
Sbjct: 109 TMAVLSIGGGDASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGR 168
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
E FA+GPV++ DP GRC G LIY LQMIILKA Q G GLVGDD+ GAV+ RIESSY
Sbjct: 169 EQFARGPVVKVDPQGRCGGTLIYDLQMIILKATQAGSGLVGDDDALGFSGAVAARIESSY 228
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDM+HVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 229 MINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 288
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANT+HY+SQS SC+L LNS+ + ++S E
Sbjct: 289 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCALALNSYAVSLDNSQE 348
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F VELD+AN TWL DVA+ S+KTGELLLLTL+YDGRVVQRL+L +SKASVL+SG
Sbjct: 349 IPRSSFNVELDSANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSG 408
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGT-SSLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I IG+S FFLASRLGDS+L+Q+S G+ S+ S+N+K+E+ D E + +KRL R+PSD
Sbjct: 409 ITTIGNSLFFLASRLGDSMLVQFSCGSGGSMLSSNLKEEVGDIEADAP-SKRLRRSPSDT 467
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L +V S EELSLYG A N +E AQK FSF VRDSLINVGPL+DFSYGLRINAD NATG A
Sbjct: 468 LQDVVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIA 527
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNG+LCVL+QSIRPE+ITEVELPGCKGIWTVYHK +R H D+SK+
Sbjct: 528 KQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNTDSSKL 587
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
DDDEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG T+AAGNLFGRRRVIQ+Y
Sbjct: 588 ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 647
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ+V FG NS+ +S SE+ + +SVSIADP+VLL+MSDGS++LLIGD
Sbjct: 648 RGARILDGSFMTQDVTFGASNSESASASESAIALSVSIADPFVLLRMSDGSVRLLIGDPI 707
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
F S+ + +C LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG D
Sbjct: 708 TCTISVTSPASFESTKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQD 767
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREP-SATFQGSKGKVS 2146
GDIYC+VC+++G LE FDV NF CVFSV NF+ GKSHL+D +E + +G + V
Sbjct: 768 HGDIYCVVCFDNGNLEIFDVPNFNCVFSVGNFMSGKSHLVDALMKEVLKDSKKGDRDGVI 827
Query: 2147 EESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
+ KE DMK+VELAM RW GQ++RPFL ILSDGT+LCYHAYLYE +G K E
Sbjct: 828 IQGR---KENVPDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDGTSKVE 884
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+ S S + + SRLRNLRFVRV +D RE++SN +ITIFKN+G YQG FL
Sbjct: 885 DSASAGGSIGLGTTNISRLRNLRFVRVSLDAYAREETSNGSLHQQITIFKNIGSYQGFFL 944
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
SGSRPAW MV RER+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTS+G LKICQLPS N
Sbjct: 945 SGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSN 1004
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YD+YWPV KIPL+ TPHQVTY+AE+NLYPLI+SF V++PL+QV+ S+ DQD+ H N++ N
Sbjct: 1005 YDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLSQVI-SLVDQDVNHQNESQN 1063
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
+NSD+ + Y IDEFE+RI+EP KSGG W+T+A IPMQ+SENALTVR+VTL NT +KENE
Sbjct: 1064 MNSDEQNRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENE 1123
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLAIGTAYVQGEDVAARGR+LL++ KN D+ Q++VSEVYSKELKGA+SA+ASLQGHLL
Sbjct: 1124 TLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQSLVSEVYSKELKGAISALASLQGHLL 1183
Query: 3227 VASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQ 3403
+ASGPKI LHKW GTELNGIAF+DA PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQ
Sbjct: 1184 IASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQ 1243
Query: 3404 LSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEF 3583
LSLLAKDF+SLD +ATEFLIDGSTLSL+VSDDK+NIQIFYYAPK ESWKGQKLLSRAEF
Sbjct: 1244 LSLLAKDFSSLDCFATEFLIDGSTLSLMVSDDKRNIQIFYYAPKMSESWKGQKLLSRAEF 1303
Query: 3584 HAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQ 3763
H GAHVTKFLRLQML T SDR PGSDKTNRFALLF +LDGSIGCIAPLDE+TFRRLQ
Sbjct: 1304 HVGAHVTKFLRLQMLPT-SDRAGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQ 1362
Query: 3764 TLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQ 3943
+LQ+KLVD V H GLNP++FR+F+SNGKAHRPGPD++VDCELL YEMLPL++QLEIA
Sbjct: 1363 SLQKKLVDAVAHVAGLNPRAFRKFQSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAH 1422
Query: 3944 QIVTTRSQILSNLSDLSLGTSFL 4012
Q+ TTRSQILSNLSDLSLGTSFL
Sbjct: 1423 QVGTTRSQILSNLSDLSLGTSFL 1445
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 1939 bits (5024), Expect = 0.0
Identities = 967/1345 (71%), Positives = 1126/1345 (83%), Gaps = 8/1345 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKRGR
Sbjct: 115 SLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIESS+
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSH 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS E
Sbjct: 295 HPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F+VELDAA+ TWL DVA+ S+KTG+L+LLT++YDGRVVQRL+L ++ SVLTS
Sbjct: 355 LPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYS--SGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q++ SGTS LSS +K+E D E + KRL R+ SD
Sbjct: 415 ITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSS-GLKEEFGDIEADAPSTKRLRRSSSD 473
Query: 1076 ALLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
AL ++ + EELSLYG A+N +E AQK FSF VRDSL+N+GPL+DFSYGLRINAD +ATG
Sbjct: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
+KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH AD+S+
Sbjct: 534 SKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSR 593
Query: 1433 MD--DDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
M DDEYHAYLIISLE RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRVIQ++
Sbjct: 594 MAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVF 653
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDGSYMTQ++ FG NS+ S SE V+SVSIADPYVLL MSDGSI+LL+GD
Sbjct: 654 ERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDP 713
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
SS +P+ +C LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG
Sbjct: 714 STCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPL 773
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIY +VCYESG LE FDV NF CVF+V+ F+ G++H++D Y RE + S
Sbjct: 774 DQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSS 833
Query: 2147 EESNG-FLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKF 2323
EE G KE MK+VELAM RW G ++RPFL AIL+DGT+LCY AYL+EG E K
Sbjct: 834 EEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGPENTSKS 893
Query: 2324 EDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLF 2503
+D VS +S S++S SRLRNLRF R+P+D TRE++ + RITIFKN+ G+QG F
Sbjct: 894 DDPVSTSRSLSVSNVSASRLRNLRFARIPLDAYTREETPHGAPCQRITIFKNISGHQGFF 953
Query: 2504 LSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLC 2683
LSGSRP W MV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+G LKICQLPS
Sbjct: 954 LSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGS 1013
Query: 2684 NYDNYWPVHK-IPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDN 2860
YDNYWPV K IPL+ TPHQ+TY+AE+NLYPLI+S V++PLNQVL + DQ++ H DN
Sbjct: 1014 TYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDN 1073
Query: 2861 DNVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKE 3040
N++S DL + YT++E+E+RILEP ++GG W+TRA IPMQ+SENALTVRVVTLFNT TKE
Sbjct: 1074 HNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKE 1133
Query: 3041 NETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGH 3220
NETLLAIGTAYVQGEDVAARGR+LL++ +N D+ QN+V+EVYSKELKGA+SA+ASLQGH
Sbjct: 1134 NETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGH 1193
Query: 3221 LLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQG 3397
LL+ASGPKI LHKWTGTELNGIAFYDA PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQG
Sbjct: 1194 LLIASGPKIILHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQG 1253
Query: 3398 AQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRA 3577
AQL+LLAKDF SLD +ATEFLIDGSTLSLVVSD++KNIQIFYYAPK ESWKGQKLLSRA
Sbjct: 1254 AQLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRA 1313
Query: 3578 EFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRR 3757
EFH GAHVTKFLRLQML+TSSDRT PGSDKTNRFALLF +LDGSIGCIAPLDELTFRR
Sbjct: 1314 EFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRR 1373
Query: 3758 LQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEI 3937
LQ+LQ+KLVD VPH GLNP+SFRQF SNGKAHRPGPD++VDCELLS YEMLPL++QLEI
Sbjct: 1374 LQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEI 1433
Query: 3938 AQQIVTTRSQILSNLSDLSLGTSFL 4012
A Q TTRSQILSNL+DL+LGTSFL
Sbjct: 1434 AHQTGTTRSQILSNLNDLALGTSFL 1458
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 1939 bits (5024), Expect = 0.0
Identities = 966/1344 (71%), Positives = 1123/1344 (83%), Gaps = 7/1344 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKRGR
Sbjct: 115 SLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIESS+
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSH 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS E
Sbjct: 295 HPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F+VELDAA+ TWL DVA+ S+KTG+L+LLT++YDGRVVQRL+L ++ SVLTS
Sbjct: 355 LPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYS--SGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q++ SGTS LSS K+E D E + KRL R+ SD
Sbjct: 415 ITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGP-KEEFGDIEADAPSTKRLRRSSSD 473
Query: 1076 ALLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
AL ++ + EELSLYG A+N +E AQK FSF VRDSL+N+GPL+DFSYGLRINAD +ATG
Sbjct: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
+KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH D+S+
Sbjct: 534 SKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNTDSSR 593
Query: 1433 MD--DDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
M DDEYHAYLIISLE RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRVIQ++
Sbjct: 594 MAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVF 653
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDGSYMTQ++ FG NS+ S SE V+SVSIADPYVLL MSDGSI+LL+GD
Sbjct: 654 ERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDP 713
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
SS +P+ AC LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG
Sbjct: 714 STCTVSVQTPAAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPL 773
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIY +VCYESG LE FDV NF CVF+V+ F+ G++H++D Y RE + S
Sbjct: 774 DQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSS 833
Query: 2147 EESNGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKF 2323
EE G KE MK+VELAM RW G ++RPFL AIL+DGT+LCY AYL+EG E K
Sbjct: 834 EEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGSENTSKS 893
Query: 2324 EDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLF 2503
+D VS +S S++S SRLRNLRF R P+D TRE++ + RITIFKN+ G+QG F
Sbjct: 894 DDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFF 953
Query: 2504 LSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLC 2683
LSGSRP W MV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+G LKICQLPS
Sbjct: 954 LSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGS 1013
Query: 2684 NYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDND 2863
YDNYWPV KIPL+ TPHQ+TY+AE+NLYPLI+S V++PLNQVL + DQ++ H DN
Sbjct: 1014 TYDNYWPVQKIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNH 1073
Query: 2864 NVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKEN 3043
N++S DL + YT++E+E+RILEP ++GG W+TRA IPMQ+SENALTVRVVTLFNT TKEN
Sbjct: 1074 NLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKEN 1133
Query: 3044 ETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHL 3223
+TLLAIGTAYVQGEDVAARGR+LL++ +N D+ QN+V+EVYSKELKGA+SA+ASLQGHL
Sbjct: 1134 DTLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHL 1193
Query: 3224 LVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGA 3400
L+ASGPKI LHKWTGTELNGIAFYDA PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQGA
Sbjct: 1194 LIASGPKIILHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGA 1253
Query: 3401 QLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAE 3580
QL+LLAKDF SLD +ATEFLIDGSTLSLVVSD++KNIQIFYYAPK ESWKGQKLLSRAE
Sbjct: 1254 QLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAE 1313
Query: 3581 FHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRL 3760
FH GAHVTKFLRLQML+TSSDRT PGSDKTNRFALLF +LDGSIGCIAPLDELTFRRL
Sbjct: 1314 FHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRL 1373
Query: 3761 QTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIA 3940
Q+LQ+KLVD VPH GLNP+SFRQF SNGKAHRPGPD++VDCELLS YEMLPL++QLEIA
Sbjct: 1374 QSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEIA 1433
Query: 3941 QQIVTTRSQILSNLSDLSLGTSFL 4012
Q TTRSQILSNL+DL+LGTSFL
Sbjct: 1434 HQTGTTRSQILSNLNDLALGTSFL 1457
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 1938 bits (5020), Expect = 0.0
Identities = 980/1370 (71%), Positives = 1126/1370 (82%), Gaps = 33/1370 (2%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
++ +LS G + + RRDSI+L+FQDAKI+VLE+DDS HGLRTSSMHCFEGP+W YLKRGR
Sbjct: 117 TIAVLSSGGGDGSRRRDSIILSFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWLYLKRGR 176
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC+GVL Y +QMI+LKAAQ G GLVG+++ SGGAVS RIESSY
Sbjct: 177 ESFARGPLVKVDPQGRCAGVLAYNIQMIMLKAAQAGSGLVGEEDALGSGGAVSARIESSY 236
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDMKH+KDF FVHGYIEPV+V+LHE+E TWAGR+ WKHHTCMISALSI+T+LKQ
Sbjct: 237 IINLRDLDMKHIKDFVFVHGYIEPVMVILHERELTWAGRVLWKHHTCMISALSISTTLKQ 296
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVICANT+HY SQS SC+L LNS+ + +SS E
Sbjct: 297 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVICANTLHYQSQSNSCTLALNSYAVSVDSSQE 356
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
M ++ F+VELDAAN TWLS DV + S+K GELLLLTL+YDGRVVQRL+L +SKASVLTSG
Sbjct: 357 MRRAPFSVELDAANATWLSNDVVLLSTKAGELLLLTLVYDGRVVQRLDLSKSKASVLTSG 416
Query: 902 IAKIGSSFFFLASRLGDSLLIQ--YSSGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q Y GTS LSS +KDE+ D EG+ HLAKRL R+ SD
Sbjct: 417 ITTIGNSLFFLGSRLGDSLLVQFTYGLGTSMLSS-GLKDEVGDIEGDAHLAKRLRRSSSD 475
Query: 1076 ALLEVASYEELSLY-GATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
L ++ S EELSLY A N SE QK FSF VRDSL+NVGPL+DFSYGLRINADPNATG
Sbjct: 476 VLQDMTSGEELSLYVSAPNNSESTQKSFSFTVRDSLVNVGPLKDFSYGLRINADPNATGV 535
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
AKQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK +R H +
Sbjct: 536 AKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSTRSHDSSKLV 595
Query: 1433 MDDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYAR 1612
DDEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG TIAAGNLFGRRRV+Q+Y R
Sbjct: 596 AADDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYER 655
Query: 1613 GARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXXX 1792
GARILDGS+MTQ++ FG S+ SS SE VV SVSIADPYV+L+MSDGSI+LL+GD
Sbjct: 656 GARILDGSFMTQDLSFGPAPSESSSGSENAVVTSVSIADPYVVLRMSDGSIRLLVGDPTS 715
Query: 1793 XXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYNDQ 1972
F SS I AC LY DKG EPWLRKTSTDAWLSTG+ EAIDG D DQ
Sbjct: 716 CTVSVSTPADFESSKSIISACTLYRDKGPEPWLRKTSTDAWLSTGVDEAIDGADETLQDQ 775
Query: 1973 GDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSEE 2152
GDIYC+VCYESG+L+ +DV +F VFSV+NFI G+ HL+D + +E Q + K SEE
Sbjct: 776 GDIYCVVCYESGSLDIYDVPSFNYVFSVDNFISGRPHLVDAFVQEQPKDLQKATNKNSEE 835
Query: 2153 SNG-FLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFED 2329
S G KE ++MKIVELAM RW G+++RPFL IL+DG++LCYHAYL+EG E + ED
Sbjct: 836 SAGQGRKENVQNMKIVELAMQRWSGKHSRPFLLGILTDGSILCYHAYLFEGPESTSRTED 895
Query: 2330 AVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLS 2509
+VS + S SGSRLRNLRFVRVP+D RE++S+ + RI++FKN+ GYQGLFLS
Sbjct: 896 SVSSRNS------SGSRLRNLRFVRVPLDSYAREETSDGMPCQRISVFKNIAGYQGLFLS 949
Query: 2510 GSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNY 2689
GSRPAWFMV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTSEG LKICQLPS+ +Y
Sbjct: 950 GSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSEGILKICQLPSITSY 1009
Query: 2690 DNYWPVHK-IPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
DNYWPV K IPL+GTPHQVTY+AERNLYPLI+S V +PLNQV+ S+ DQ++ H +N N
Sbjct: 1010 DNYWPVQKVIPLKGTPHQVTYFAERNLYPLIVSVPVPKPLNQVMSSLLDQEVGHQFENPN 1069
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
++ DDL + YTIDEFE+RILEP +SGG W+T+ IPMQ+SENALT+RVVTLFNT T ENE
Sbjct: 1070 LSPDDLNRTYTIDEFEVRILEPERSGGPWQTKVTIPMQSSENALTIRVVTLFNTTTNENE 1129
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTF-------------------------VKNVDSS-- 3145
TLLAIGTAYVQGEDVAARGR++L V +DS+
Sbjct: 1130 TLLAIGTAYVQGEDVAARGRIILRALAPWWERLHLHPGSRVQIPEMASPSGVFKIDSADF 1189
Query: 3146 QNVVSEVYSKELKGAVSAIASLQGHLLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSL 3322
VSE+YSKELKGA+SA+ASLQGHLL+ASGPKI LHKWTGTELNGIAF+DA PL+VVSL
Sbjct: 1190 HLQVSEIYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLYVVSL 1249
Query: 3323 NIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDK 3502
NIVKNFIL+GD+HKSIYFL+WKEQGAQLSLLAKDF SLD +ATEFLIDGSTLSLVVSDD+
Sbjct: 1250 NIVKNFILIGDVHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDDQ 1309
Query: 3503 KNIQIFYYAPKTLESWKGQKLLSRAEFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNR 3682
KNIQIFYYAPK ESWKGQ+LLSRAEFH GAHVTKFLRLQML TS+DRT TPGSDKTNR
Sbjct: 1310 KNIQIFYYAPKMSESWKGQRLLSRAEFHVGAHVTKFLRLQMLPTSTDRTGSTPGSDKTNR 1369
Query: 3683 FALLFSSLDGSIGCIAPLDELTFRRLQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRP 3862
FALLF +LDGSIGCIAPLDELTFRRLQ+LQ+KLVD VPH GLNP+SFRQF SNGKAHRP
Sbjct: 1370 FALLFGALDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFCSNGKAHRP 1429
Query: 3863 GPDNMVDCELLSQYEMLPLDKQLEIAQQIVTTRSQILSNLSDLSLGTSFL 4012
GPD++VDCELL YEMLPL++QLEIA I TTRSQILSNL+DL LGTSFL
Sbjct: 1430 GPDSIVDCELLCHYEMLPLEEQLEIAHLIGTTRSQILSNLNDLFLGTSFL 1479
>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cicer arietinum]
Length = 1447
Score = 1937 bits (5018), Expect = 0.0
Identities = 966/1343 (71%), Positives = 1129/1343 (84%), Gaps = 6/1343 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ +LS+G + + RRDSI+L F+DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGR
Sbjct: 113 SVAVLSVGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGR 172
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
E FA+GPV + DP GRC GVL+Y LQMIILK Q G GLVG+D+ SGGAV+ RIESSY
Sbjct: 173 EHFARGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVLGSGGAVAARIESSY 232
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDM+HVKDFTF+HGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 233 MINLRDLDMRHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 292
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LNS+ + ++S E
Sbjct: 293 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSVDNSQE 352
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F VELDAAN TWL DVA+ S+KTGELLLLTLIYDGRVVQRL+L +SKASVL+SG
Sbjct: 353 MPRSSFNVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLSSG 412
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTS-SLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
+ IG+S FFLASRLGDS+L+Q+SSG+ S+ S+N+K+E+ D + + AKR+ R+PSD
Sbjct: 413 VTTIGNSLFFLASRLGDSMLVQFSSGSGVSMLSSNLKEEVGDFDVDASSAKRMRRSPSDT 472
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG ATN +E AQK FSF VRDSLINVGPL+DFSYGLRINAD NATG A
Sbjct: 473 LQDMVSGEELSLYGSATNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIA 532
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNG+LCVL+QSIRPE+ITEVELPGCKGIWTVYHK +R AD+SK+
Sbjct: 533 KQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSLNADSSKL 592
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
D+DEYHAYLIISLE+RTMVLETAD L EVTESVDYYVQG T+AAGNLFGRRRVIQ+Y
Sbjct: 593 ADDEDEYHAYLIISLESRTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 652
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ+V FG NS+ + SE+ + +SVSIADPYVLLKMSDGS++LL+GD
Sbjct: 653 RGARILDGSFMTQDVSFGASNSEANYGSESALALSVSIADPYVLLKMSDGSVRLLVGDPS 712
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
F SS + C LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG D
Sbjct: 713 TCTISVTSPASFESSKGSVSTCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQD 772
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYARE-PSATFQGSKGKVS 2146
GDIYC+VCYE+ +LE FDV NF CVFSVENF+ GKSHL+D +E P + +G K
Sbjct: 773 HGDIYCVVCYENDSLEIFDVPNFSCVFSVENFLSGKSHLVDALTKEVPKDSQKGDKVSDG 832
Query: 2147 EESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
S G ++ + +MK+VELAM RW G++ RPFL ILSDGT LCYHAYLYE +G K E
Sbjct: 833 VVSQG--RKDALNMKVVELAMQRWSGKHGRPFLFGILSDGTTLCYHAYLYESPDGTSKVE 890
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+V SA S+ S SRLRNLRFVRVP+D+ RE++SN +I IFKN+G Y+G FL
Sbjct: 891 DSV----SAGLSNSSVSRLRNLRFVRVPLDVHAREETSNGPPCQQINIFKNIGSYEGFFL 946
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
SGSRPAW M+ RER+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTS+G LKICQLPS N
Sbjct: 947 SGSRPAWVMLLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSN 1006
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YD YWPV K+PL+ TPHQVTY+AE+NLYPLI+S+ V +PLNQV+ ++ DQD + ++ N
Sbjct: 1007 YDCYWPVQKVPLKATPHQVTYFAEKNLYPLIVSYPVPKPLNQVI-ALVDQDANQLTESQN 1065
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
+N+D+ YTI+EFE+RI+EP KSGG W+ +A IPMQ+SENALTVR+VTL NT +KENE
Sbjct: 1066 LNNDEQSHLYTIEEFEVRIMEPEKSGGPWQLKATIPMQSSENALTVRMVTLMNTSSKENE 1125
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLAIGTAYVQGEDVAARGR+LL++ KN D+ QN+VSEVYSKELKGA+SA+A+LQGHLL
Sbjct: 1126 TLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQNLVSEVYSKELKGAISALAALQGHLL 1185
Query: 3227 VASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQ 3403
VASGPKI LHKWTGTELNG+AF+D PLHVVSLNIVKNFIL+GD+HKSIYFL+WKEQGAQ
Sbjct: 1186 VASGPKIILHKWTGTELNGVAFFDVPPLHVVSLNIVKNFILIGDVHKSIYFLSWKEQGAQ 1245
Query: 3404 LSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEF 3583
LSLLAKDF SLD +ATEFLIDGSTLSL+VSD++KNIQIFYYAPK ESWKGQKLLSRAEF
Sbjct: 1246 LSLLAKDFGSLDCFATEFLIDGSTLSLMVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEF 1305
Query: 3584 HAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQ 3763
H GAH+TKFLRLQMLST SD+T PGSDKTNRFALLF +LDGSIGCIAPLDE+TFRRLQ
Sbjct: 1306 HVGAHITKFLRLQMLST-SDKTGSGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQ 1364
Query: 3764 TLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQ 3943
+LQ+KLVD VPH GLNP++FR F SNGKAHRPGPD++VDCELL YEML L++QLEIA
Sbjct: 1365 SLQKKLVDAVPHVAGLNPRAFRLFHSNGKAHRPGPDSIVDCELLCHYEMLQLEEQLEIAH 1424
Query: 3944 QIVTTRSQILSNLSDLSLGTSFL 4012
Q+ TTRSQILSNLSDLSLGTSFL
Sbjct: 1425 QVGTTRSQILSNLSDLSLGTSFL 1447
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 1935 bits (5012), Expect = 0.0
Identities = 966/1345 (71%), Positives = 1123/1345 (83%), Gaps = 8/1345 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKRGR
Sbjct: 115 SLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIESS+
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSH 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 235 VINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS E
Sbjct: 295 HPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P+S F+VELDAA+ TWL DVA+ S+KTG+L+LLT++YDGRVVQRL+L ++ SVLTS
Sbjct: 355 LPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYS--SGTSSLSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I IG+S FFL SRLGDSLL+Q++ SGTS LSS K+E D E + KRL R+ SD
Sbjct: 415 ITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSS-GPKEEFGDIEADAPSTKRLRRSSSD 473
Query: 1076 ALLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
AL ++ + EELSLYG A+N +E AQK FSF VRDSL+N+GPL+DFSYGLRINAD +ATG
Sbjct: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
+KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH D+S+
Sbjct: 534 SKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNTDSSR 593
Query: 1433 MD--DDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
M DDEYHAYLIISLE RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRVIQ++
Sbjct: 594 MAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVF 653
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDGSYMTQ++ FG NS+ S SE V+SVSIADPYVLL MSDGSI+LL+GD
Sbjct: 654 ERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDP 713
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
SS +P+ AC LYHDKG EPWLRKTSTDAWLSTG+ EAIDG DG
Sbjct: 714 STCTVSVQTPAAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPL 773
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIY +VCYESG LE FDV NF CVF+V+ F+ G++H++D Y RE + S
Sbjct: 774 DQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSS 833
Query: 2147 EESNG-FLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKF 2323
EE G KE MK+VELAM RW G ++RPFL AIL+DGT+LCY AYL+EG E K
Sbjct: 834 EEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGSENTSKS 893
Query: 2324 EDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLF 2503
+D VS +S S++S SRLRNLRF R P+D TRE++ + RITIFKN+ G+QG F
Sbjct: 894 DDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFF 953
Query: 2504 LSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLC 2683
LSGSRP W MV RER+RVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+G LKICQLPS
Sbjct: 954 LSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGS 1013
Query: 2684 NYDNYWPVHK-IPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDN 2860
YDNYWPV K IPL+ TPHQ+TY+AE+NLYPLI+S V++PLNQVL + DQ++ H DN
Sbjct: 1014 TYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDN 1073
Query: 2861 DNVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKE 3040
N++S DL + YT++E+E+RILEP ++GG W+TRA IPMQ+SENALTVRVVTLFNT TKE
Sbjct: 1074 HNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKE 1133
Query: 3041 NETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGH 3220
N+TLLAIGTAYVQGEDVAARGR+LL++ +N D+ QN+V+EVYSKELKGA+SA+ASLQGH
Sbjct: 1134 NDTLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGH 1193
Query: 3221 LLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQG 3397
LL+ASGPKI LHKWTGTELNGIAFYDA PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQG
Sbjct: 1194 LLIASGPKIILHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQG 1253
Query: 3398 AQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRA 3577
AQL+LLAKDF SLD +ATEFLIDGSTLSLVVSD++KNIQIFYYAPK ESWKGQKLLSRA
Sbjct: 1254 AQLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRA 1313
Query: 3578 EFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRR 3757
EFH GAHVTKFLRLQML+TSSDRT PGSDKTNRFALLF +LDGSIGCIAPLDELTFRR
Sbjct: 1314 EFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRR 1373
Query: 3758 LQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEI 3937
LQ+LQ+KLVD VPH GLNP+SFRQF SNGKAHRPGPD++VDCELLS YEMLPL++QLEI
Sbjct: 1374 LQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEI 1433
Query: 3938 AQQIVTTRSQILSNLSDLSLGTSFL 4012
A Q TTRSQILSNL+DL+LGTSFL
Sbjct: 1434 AHQTGTTRSQILSNLNDLALGTSFL 1458
>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
[Populus trichocarpa] gi|550326263|gb|EEE96682.2|
cleavage and polyadenylation specificity factor family
protein [Populus trichocarpa]
Length = 1455
Score = 1911 bits (4951), Expect = 0.0
Identities = 955/1346 (70%), Positives = 1125/1346 (83%), Gaps = 9/1346 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
SM +LS+ + + RRDSI+LAF+DAKI+VLE+DDS HGLRTSSMHCFEGPDW++LKRGR
Sbjct: 115 SMGVLSVEGGDDSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPDWRHLKRGR 174
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC GVL+Y LQMIILKAAQ G LV D++ SG A+S I SSY
Sbjct: 175 ESFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSY 234
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLDMKHVKDF FVH YIEPV+VVLHE+E TWAGR+ WKHHTCMISALSI+T+LKQ
Sbjct: 235 IINLRDLDMKHVKDFIFVHDYIEPVVVVLHERELTWAGRVVWKHHTCMISALSISTTLKQ 294
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
+IWS N+PHDAYKLLAVPSPIGGVLVI NTIHY+S+S SC+L LNS+ +SS E
Sbjct: 295 PTLIWSIGNLPHDAYKLLAVPSPIGGVLVIGVNTIHYHSESASCALALNSYAASVDSSQE 354
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P++ F+VELDAAN TWL DVA+ S+KTGELLLLTL+YDGRVVQRL+L +SKASVLTS
Sbjct: 355 LPRATFSVELDAANATWLLKDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSD 414
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGT-SSLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I +G+SFFFL SRLGDSLL+Q++SG SS+ S +K+E+ D EG+L AKRL + SDA
Sbjct: 415 ITTLGNSFFFLGSRLGDSLLVQFTSGLGSSMLSPGLKEEVGDIEGDLPSAKRLKVSSSDA 474
Query: 1079 LLEVASYEELSLY-GATNTSEIAQ-----KFFSFIVRDSLINVGPLRDFSYGLRINADPN 1240
L ++ S EELSLY A N +E +Q K FSF VRDSLINVGPL+DF+YGLRINAD N
Sbjct: 475 LQDMVSGEELSLYSSAPNNAESSQVVSVIKTFSFTVRDSLINVGPLKDFAYGLRINADAN 534
Query: 1241 ATGTAKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVA 1420
ATG +KQSNYELVCCSGHGKNGALCVLQQSIRPE+ITEVELPGCKGIWTVYHK +R H
Sbjct: 535 ATGISKQSNYELVCCSGHGKNGALCVLQQSIRPEMITEVELPGCKGIWTVYHKNARSHSV 594
Query: 1421 DTSKM-DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVI 1597
D+ KM DDEYHAYLIIS+E RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRV+
Sbjct: 595 DSLKMASDDEYHAYLIISMEARTMVLETADHLTEVTESVDYFVQGRTIAAGNLFGRRRVV 654
Query: 1598 QIYARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLI 1777
Q++ RGARILDGS+MTQ++ FG NS+ + SE+ V+ VSI DPYVL++M+DGSIQ+L+
Sbjct: 655 QVFERGARILDGSFMTQDLSFGGSNSE-TGRSESSTVMHVSIVDPYVLVRMADGSIQILV 713
Query: 1778 GDXXXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDG 1957
GD F SST+ + AC LYHDKG EPWLRKTSTDAWLSTGI+EAIDG D
Sbjct: 714 GDPSACTVSVNTPSAFQSSTKSVSACTLYHDKGPEPWLRKTSTDAWLSTGISEAIDGADS 773
Query: 1958 LYNDQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKG 2137
++QGDIYC+VCYE+G LE FDV NF VF V+ F+ GK+HLLD EP+ KG
Sbjct: 774 GAHEQGDIYCVVCYETGALEIFDVPNFNSVFFVDKFVSGKTHLLDTCTGEPAKDMM--KG 831
Query: 2138 KVSEESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAP 2317
E + KE +++MK+VEL M RW G+++RPFL IL+DGT+LCYHAYL+EG +G
Sbjct: 832 VKEEVAGAGRKESTQNMKVVELTMLRWSGRHSRPFLFGILTDGTILCYHAYLFEGPDGTS 891
Query: 2318 KFEDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQG 2497
K ED+VS Q S AS+IS SRLRNLRFVRVP+D TRE++S+ + RIT FKN+ GYQG
Sbjct: 892 KLEDSVSAQNSVGASTISASRLRNLRFVRVPLDTYTREETSSETSCQRITTFKNISGYQG 951
Query: 2498 LFLSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPS 2677
FLSGSRPAWFMV RER+RVHPQLCDGSIVAFTVLH VNCNHGLIYVTS+G LKIC L S
Sbjct: 952 FFLSGSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHTVNCNHGLIYVTSQGNLKICHLSS 1011
Query: 2678 LCNYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMND 2857
+ +YDNYWPV KIPL+GTPHQVTY+AERNLYPLI+S V +P+NQVL S+ DQ++ H +
Sbjct: 1012 VSSYDNYWPVQKIPLKGTPHQVTYFAERNLYPLIVSVPVQKPVNQVLSSLVDQEVGHQIE 1071
Query: 2858 NDNVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTK 3037
N N++S+++ + Y++DEFE+RILEP S G W+ +A IPMQTSENALTVR+V+LFNT TK
Sbjct: 1072 NHNLSSEEIHRTYSVDEFEVRILEP--SNGPWQVKATIPMQTSENALTVRMVSLFNTSTK 1129
Query: 3038 ENETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQG 3217
ENETLLA+GTAYVQGEDVAARGR+LL++ VKN ++SQ +VSEVYSKELKGA+SA+ASLQG
Sbjct: 1130 ENETLLAVGTAYVQGEDVAARGRILLFSVVKNPENSQILVSEVYSKELKGAISALASLQG 1189
Query: 3218 HLLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQ 3394
HLL+ASGPKI LHKWTGTEL G+AF DA PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQ
Sbjct: 1190 HLLIASGPKIILHKWTGTELTGVAFSDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQ 1249
Query: 3395 GAQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSR 3574
GAQLSLLAKDFASLD ++TEFLIDGSTLSLVVSD++KN+QIFYYAPK ESWKGQKLLSR
Sbjct: 1250 GAQLSLLAKDFASLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKMSESWKGQKLLSR 1309
Query: 3575 AEFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFR 3754
AEFH GA VTKF+RLQMLS S DR+ P SDKTNRFALLF +LDGSIGCIAPLDELTFR
Sbjct: 1310 AEFHVGALVTKFMRLQMLSPSLDRSGAAPVSDKTNRFALLFGTLDGSIGCIAPLDELTFR 1369
Query: 3755 RLQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLE 3934
RLQ+LQ+KLVD VPH GLNPKSFRQFRS+GKAHRPGP+++VDCE+LS YEM+PL++Q+E
Sbjct: 1370 RLQSLQKKLVDAVPHVAGLNPKSFRQFRSDGKAHRPGPESIVDCEMLSYYEMIPLEEQVE 1429
Query: 3935 IAQQIVTTRSQILSNLSDLSLGTSFL 4012
IAQQI TTR+QILSNL+DL+LGTSFL
Sbjct: 1430 IAQQIGTTRAQILSNLNDLTLGTSFL 1455
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 1909 bits (4945), Expect = 0.0
Identities = 943/1346 (70%), Positives = 1117/1346 (82%), Gaps = 9/1346 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
SM +L + + RRDSI+LAF+DAKI+VLE+DDS HGLRTSSMHCFEGP+W +LKRGR
Sbjct: 116 SMVVLPTEGGDSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGR 175
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP+++ DP GRC G+L+Y +QMIIL+AAQ GLVGDD+ +SGG++S R++SSY
Sbjct: 176 ESFARGPLLKVDPQGRCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSY 235
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VINLRD+DMKHVKDF F+H YIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 236 VINLRDMDMKHVKDFIFLHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 295
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
+IWS N+PHDAYKLLAVP PIGGVLVICANTIHY+S+S + +L LN++ + +SS E
Sbjct: 296 PTLIWSVVNLPHDAYKLLAVPPPIGGVLVICANTIHYHSESATYALALNNYAVSIDSSQE 355
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P++ F+VELDA WL DVA+ S+K GELLLL+L+YDGRVVQRL+L +SKASVLTS
Sbjct: 356 LPRASFSVELDAVKAAWLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVLTSD 415
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTS-SLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
I IG+S FFL SRLGDSLL+Q+++G S+ S+ +K+E+ + EG++ AKRL R+ SD
Sbjct: 416 ITTIGNSLFFLGSRLGDSLLVQFTNGLGPSVVSSGLKEEVGEIEGDVPSAKRLKRSASDG 475
Query: 1079 LLEVASYEELSLYGAT-NTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG+T N +E AQK FSF VRDSLINVGPL+DFSYGLR N D +ATG A
Sbjct: 476 LQDMVSGEELSLYGSTANNTESAQKSFSFAVRDSLINVGPLKDFSYGLRSNYDASATGIA 535
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNY+LVCCSGHGKNG LC+L+QSIRPE+ITEV+LPGC+GIWTVYHK +RGH D SKM
Sbjct: 536 KQSNYDLVCCSGHGKNGTLCILRQSIRPEMITEVDLPGCRGIWTVYHKNARGHNVDLSKM 595
Query: 1436 DD--DEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
DEYHAYLIIS+E RTMVLETAD L EVTESVDY+VQG TIAAGNLFGRRRVIQ++
Sbjct: 596 AAAADEYHAYLIISMEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVIQVFE 655
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
RGARILDGS+MTQ++ G NS+ S SE+ V SVSIADPYVL+KM+DGSI+LLIGD
Sbjct: 656 RGARILDGSFMTQDLSIGSSNSESSPGSESATVSSVSIADPYVLIKMTDGSIRLLIGDSS 715
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGH---DGL 1960
F +S + AC LYHDKG EPWLRK STDAWLSTG++EAIDG DG
Sbjct: 716 TCMVSINTPSAFENSERSVSACTLYHDKGPEPWLRKASTDAWLSTGVSEAIDGAESADGG 775
Query: 1961 YNDQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGK 2140
+DQGDIYC+VCYESG LE FDV NF VFSV+ F+ GK+HL D Y REP Q +
Sbjct: 776 PHDQGDIYCIVCYESGALEIFDVPNFNRVFSVDKFVSGKTHLADAYVREPPKDSQEKTNR 835
Query: 2141 VSEESNGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAP 2317
+SEE G KE + +MK VELAM RW G ++RPFL +L+DGT+LCYHAYL+E +
Sbjct: 836 ISEEVAGLGRKENAHNMKAVELAMQRWSGHHSRPFLFGVLTDGTILCYHAYLFEAPDATS 895
Query: 2318 KFEDAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQG 2497
K ED+VS Q SIS SRLRNLRFVRVP+D +E++S + RITIF N+ G+QG
Sbjct: 896 KTEDSVSAQNPVGLGSISASRLRNLRFVRVPLDSYIKEETSTENSCQRITIFNNISGHQG 955
Query: 2498 LFLSGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPS 2677
FL GSRPAWFMV RER+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTS+G LKICQLPS
Sbjct: 956 FFLLGSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPS 1015
Query: 2678 LCNYDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMND 2857
NYDNYWPV KIPL+GTPHQVTY+ E+NLYPLI+S V +P+NQVL S+ DQ++ H +
Sbjct: 1016 FSNYDNYWPVQKIPLKGTPHQVTYFPEKNLYPLIVSVPVHKPVNQVLSSLVDQEVGHQIE 1075
Query: 2858 NDNVNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTK 3037
N N++SD+L + Y+++EFE+RILE GG W+T+A IPMQ+SENALTVRVVTLFN TK
Sbjct: 1076 NHNLSSDELLQTYSVEEFEVRILESENGGGPWQTKATIPMQSSENALTVRVVTLFNATTK 1135
Query: 3038 ENETLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQG 3217
ENETLLAIGTAYVQGEDVAARGR+LL++ VK+ ++SQ +VSEVYSKELKGA+SA+ASLQG
Sbjct: 1136 ENETLLAIGTAYVQGEDVAARGRVLLFSVVKSTENSQVLVSEVYSKELKGAISALASLQG 1195
Query: 3218 HLLVASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQ 3394
HLL+ASGPKI LHKWTGTELNG+AFYDA PL+V S+NIVKNFILLGDIHKSIYFL+WKEQ
Sbjct: 1196 HLLIASGPKIILHKWTGTELNGVAFYDAPPLYVASMNIVKNFILLGDIHKSIYFLSWKEQ 1255
Query: 3395 GAQLSLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSR 3574
GAQLSLLAKDF SLD +ATEFLIDGSTLSLVVSD++KNIQIFYYAPK LESWKGQKLLSR
Sbjct: 1256 GAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMLESWKGQKLLSR 1315
Query: 3575 AEFHAGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFR 3754
AEFH GAH+TKF+RL MLSTSSDR+ PG DKTNRFALLF +LDGSIGCIAPLDELTFR
Sbjct: 1316 AEFHVGAHITKFIRLSMLSTSSDRSGAAPGPDKTNRFALLFGTLDGSIGCIAPLDELTFR 1375
Query: 3755 RLQTLQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLE 3934
RLQ+LQRKLVD VPH GLNP+SFRQFRS+GK HRPGP+++VDCELLS +EMLPL++QLE
Sbjct: 1376 RLQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRPGPESIVDCELLSHFEMLPLEEQLE 1435
Query: 3935 IAQQIVTTRSQILSNLSDLSLGTSFL 4012
IAQQ+ TTR+QILSNL+DLSLGTSFL
Sbjct: 1436 IAQQVGTTRAQILSNLNDLSLGTSFL 1461
>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
gi|548855397|gb|ERN13281.1| hypothetical protein
AMTR_s00041p00037520 [Amborella trichopoda]
Length = 1459
Score = 1904 bits (4931), Expect = 0.0
Identities = 937/1342 (69%), Positives = 1111/1342 (82%), Gaps = 5/1342 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M ILS G+D+ +RDSI+L F++AKI+VLEYDDS HGLRTSSMHCFEGP+WQYLKRGR
Sbjct: 121 TMAILSAGSDDGRRKRDSIILTFKEAKISVLEYDDSLHGLRTSSMHCFEGPEWQYLKRGR 180
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
E+FA+GP++ DP GRC GVLI QM+ILKA++ G G VGDD+ G VS+RIESSY
Sbjct: 181 ENFARGPLVYVDPQGRCGGVLICDSQMLILKASKAGYGFVGDDDANGPTGTVSIRIESSY 240
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
VI+LR+LDMKHVKDF FVHGYIEPV+V+LHEKE TWAGR+SWKHHTCMISA SI+T+LKQ
Sbjct: 241 VISLRELDMKHVKDFVFVHGYIEPVMVILHEKELTWAGRLSWKHHTCMISAFSISTTLKQ 300
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSASN+PHDAYKLL+VPSPIGGVLVICAN+IHY+SQS+SC+L LN F + E+S E
Sbjct: 301 HPLIWSASNLPHDAYKLLSVPSPIGGVLVICANSIHYHSQSMSCALALNDFAVAGENSQE 360
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S VELDAA+ TWLS DVA+FS KTGELLLLTL+YDGR VQRLEL +S+ASVLTSG
Sbjct: 361 MPRSNVNVELDAAHATWLSNDVALFSIKTGELLLLTLVYDGRTVQRLELSKSRASVLTSG 420
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSS--LSSANMKDEIADSEGELHLAKRLCRTPSD 1075
I I + FFFL SRLGDSLL+Q++SG S L+S KDE + EG+ AKRL R SD
Sbjct: 421 ITTISNHFFFLGSRLGDSLLVQFNSGASQSILTSRQGKDEGVEIEGDAPAAKRLRRASSD 480
Query: 1076 ALLEVASYEELSLY-GATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGT 1252
+V EELSLY A N + AQK FSF VRDSL+NVGPL+DFSYGLRINADPNA+G
Sbjct: 481 VSQDVN--EELSLYVSAPNNLDPAQKSFSFAVRDSLLNVGPLKDFSYGLRINADPNASGV 538
Query: 1253 AKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSK 1432
AKQSNYELV CSGHGKNGALC+LQQSIRPEL+TEVEL G KGIWTVYHK R H D+SK
Sbjct: 539 AKQSNYELVSCSGHGKNGALCLLQQSIRPELVTEVELTGVKGIWTVYHKNPRSHSTDSSK 598
Query: 1433 M--DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIY 1606
+ + DE+HAYLIISLE+RTMVLETAD LGEVTESVDYYVQGSTI AGNLFGRRRV+QIY
Sbjct: 599 VAAEGDEFHAYLIISLESRTMVLETADLLGEVTESVDYYVQGSTIVAGNLFGRRRVVQIY 658
Query: 1607 ARGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDX 1786
RGARILDG+YMTQ++PFG ++D +SNSEA V S SIADPYVLL+M DGSIQLL GD
Sbjct: 659 VRGARILDGAYMTQDLPFGHSSTDSTSNSEASTVSSASIADPYVLLRMVDGSIQLLTGDP 718
Query: 1787 XXXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYN 1966
F + ++PI AC YHDKG EPWLRK S DAWLS+G+AEA+DG DG +
Sbjct: 719 ATCTITSSLPAVFENLSDPITACTFYHDKGPEPWLRKASPDAWLSSGVAEALDGSDGSQH 778
Query: 1967 DQGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVS 2146
DQGDIYCLVCYESG LE FDV +FKC+FSV+ F+ ++HL D + +E +K S
Sbjct: 779 DQGDIYCLVCYESGRLEIFDVPSFKCLFSVDRFLTVRTHLFDAHHQESFKDLHKAKSSYS 838
Query: 2147 EESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFE 2326
E+S+ KE ++MK+VEL MHRW GQY RPFL A L+DG+ LCYHAYLYEGQ+ K +
Sbjct: 839 EDSDQLEKEAVKNMKVVELCMHRWSGQYGRPFLFAGLADGSTLCYHAYLYEGQDNMTKLD 898
Query: 2327 DAVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFL 2506
D+ S + +AS+ S SRLRNLRF+RV + TRE+S VV+ +I F N+GG+QG F+
Sbjct: 899 DSNSAENVVEASNTSTSRLRNLRFIRVSLQSLTREESPGVVSYRKIITFMNIGGHQGAFI 958
Query: 2507 SGSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCN 2686
+GSRPAW +VCRER+R+H QLCDG IVAFTVLHNVNCN+G IYVTS+G+LKIC+LPS N
Sbjct: 959 AGSRPAWLIVCRERLRIHHQLCDGPIVAFTVLHNVNCNYGCIYVTSQGFLKICRLPSWLN 1018
Query: 2687 YDNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDN 2866
YDNYWPV KIPLRGTPHQVTY AE+NLY LILS V +P +QVL S+ D ++ H +++DN
Sbjct: 1019 YDNYWPVQKIPLRGTPHQVTYIAEKNLYALILSIPVAKPSSQVLTSLVDHEVSHQSEHDN 1078
Query: 2867 VNSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENE 3046
+N +DL ++Y IDEFE+RILEP K+GG WET+A IPMQ+SE+A+T+R+V+L NT+TKE +
Sbjct: 1079 LNPEDLNRSYFIDEFEVRILEPAKAGGPWETKATIPMQSSEHAITIRLVSLSNTLTKETD 1138
Query: 3047 TLLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLL 3226
TLLA+GTAYVQGEDVAARGR++LY+ +N D+ QN V+EV+SKELKGA+SA+A LQGHLL
Sbjct: 1139 TLLAVGTAYVQGEDVAARGRIILYSVGQNADNPQNWVTEVHSKELKGAISALAPLQGHLL 1198
Query: 3227 VASGPKITLHKWTGTELNGIAFYDAPLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQL 3406
+ASGPKI LHKW GTEL +AF+DAPL+VVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQL
Sbjct: 1199 IASGPKIVLHKWNGTELTAVAFFDAPLYVVSLNIVKNFILMGDIHKSIYFLSWKEQGAQL 1258
Query: 3407 SLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFH 3586
SLLAKDF SL+ Y TEFLIDGSTLSLVVSDD+KNIQIFYYAPK +ESWKGQKLL +AEFH
Sbjct: 1259 SLLAKDFGSLNCYTTEFLIDGSTLSLVVSDDQKNIQIFYYAPKLMESWKGQKLLPKAEFH 1318
Query: 3587 AGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQT 3766
G+HVT+ +RLQML T SDRT+ + G+DKTNRFALLF +LDGSIGCIAPL+ELTFRRLQ
Sbjct: 1319 VGSHVTRLMRLQMLPT-SDRTSASSGTDKTNRFALLFGTLDGSIGCIAPLEELTFRRLQM 1377
Query: 3767 LQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQ 3946
LQRKLVD VPH CGLNP++FRQFRSNGKAH+PGPDNMVDCELL YEMLPL++QL+IA Q
Sbjct: 1378 LQRKLVDRVPHACGLNPRAFRQFRSNGKAHKPGPDNMVDCELLCHYEMLPLEEQLDIAHQ 1437
Query: 3947 IVTTRSQILSNLSDLSLGTSFL 4012
I TTR+QI++NLSDL+LGTSFL
Sbjct: 1438 IGTTRAQIVTNLSDLTLGTSFL 1459
>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Fragaria vesca subsp. vesca]
Length = 1439
Score = 1904 bits (4931), Expect = 0.0
Identities = 947/1341 (70%), Positives = 1114/1341 (83%), Gaps = 4/1341 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
+M +LS G + + RRD+I+L F+DAKI+VLE+DDS HGLRTSSMHCFEGP+W +L+RGR
Sbjct: 117 TMAVLSSGGGDGSKRRDAIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGR 176
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GP ++ DP GRC GVL+Y LQ+IILKAAQ G GLVGDD+ SG A+S R+ESSY
Sbjct: 177 ESFARGPSVKVDPQGRCGGVLVYDLQLIILKAAQGGYGLVGDDDGFASGAAISARVESSY 236
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+I+LRD+DMKHVKDFTFVHGYIEPVLV+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 237 IISLRDMDMKHVKDFTFVHGYIEPVLVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 296
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI AN+IHY+SQS SC+L LNS+ +SS E
Sbjct: 297 HPLIWSAINLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAGSVDSSQE 356
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F VELDAAN +WLS DV + S+KTGELLLLTL+YDGRVV RL+L +SKASVLTSG
Sbjct: 357 MPRSSFTVELDAANASWLSNDVILLSTKTGELLLLTLVYDGRVVHRLDLSKSKASVLTSG 416
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGT-SSLSSANMKDEIADSEGELHLAKRLCRTPSDA 1078
IA +G+S FFL SRLGDSLL+Q++SG +S+ SA++KDE+ D EG+ AKRL + SDA
Sbjct: 417 IATVGNSLFFLGSRLGDSLLVQFTSGVGASMLSADLKDEVGDIEGDAPSAKRLRMSSSDA 476
Query: 1079 LLEVASYEELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
L ++ S EELSLYG A N +E AQ+ FSF VRDSL+NVGPL+DFSYGLRINAD NATG A
Sbjct: 477 LQDMISGEELSLYGSAQNNAESAQRSFSFAVRDSLVNVGPLKDFSYGLRINADANATGIA 536
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEV LPGCKGIWTVYHK +RGH A++
Sbjct: 537 KQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVALPGCKGIWTVYHKNARGHNAESY-- 594
Query: 1436 DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYARG 1615
DDEYHA+LIISLE RTMVLETAD L EVT+ VDY++QG TIAAGNLFGRRRV+QIY RG
Sbjct: 595 -DDEYHAFLIISLEARTMVLETADHLSEVTDKVDYFLQGRTIAAGNLFGRRRVVQIYERG 653
Query: 1616 ARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXXXX 1795
ARIL+G YMTQ++ FG NS+ S SE+ V+SVSI DPYVLL+MSDG I+LL+GD
Sbjct: 654 ARILEGYYMTQDLSFGASNSESGSGSESATVLSVSIVDPYVLLRMSDGGIRLLVGDPSSC 713
Query: 1796 XXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYNDQG 1975
F SS + + AC LYHD+G EPWLRK+STDAWLSTGI EAI DG+ +DQG
Sbjct: 714 TVSVSNPAAFESSKKLVSACTLYHDEGPEPWLRKSSTDAWLSTGIDEAI---DGVLHDQG 770
Query: 1976 DIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSEES 2155
D+YC++CYESG+LE FDV NF CVFSVE F+ GK L+D + +P K + SEE
Sbjct: 771 DVYCVICYESGSLEIFDVPNFNCVFSVEKFVSGKPLLVDTFMGDP------QKSQSSEEV 824
Query: 2156 NGF-LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFEDA 2332
+G KE ++M++VEL M RW GQ++RPFL IL+DG + CYHAYLYE + K E
Sbjct: 825 SGLSRKEKLQNMRVVELTMQRWSGQHSRPFLFGILNDGMIFCYHAYLYESMDSTSKTE-- 882
Query: 2333 VSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLSG 2512
SA + + + SRLRNLRFVRVP+D +R D SN + R+T+FKN+ G QGLFL+G
Sbjct: 883 ----VSASSQNTTASRLRNLRFVRVPLDTYSRNDLSNGTSCQRMTVFKNIAGNQGLFLAG 938
Query: 2513 SRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNYD 2692
SRPAW MV RER+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEG +KICQLPS+ +YD
Sbjct: 939 SRPAWLMVFRERIRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGIMKICQLPSITSYD 998
Query: 2693 NYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDNVN 2872
NYWPV KIPL+GTPHQVTY+AE+NLYPLI+S V +PLNQVL S+ DQ+ H +N N++
Sbjct: 999 NYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSIPVQKPLNQVLSSLVDQEFSHQVENHNLS 1058
Query: 2873 SDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENETL 3052
++L + YT+DEFE+RI+EP KSGG W+TRA IPMQTSENALTVRVVTLFNT TKENETL
Sbjct: 1059 PEELHRTYTVDEFEVRIMEPEKSGGPWQTRATIPMQTSENALTVRVVTLFNTTTKENETL 1118
Query: 3053 LAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLLVA 3232
LAIGTAYVQGEDVA RGR+LL++ NVD+ QN+VSEV+SKELKGA+SA+ASLQG+LL+A
Sbjct: 1119 LAIGTAYVQGEDVAGRGRVLLFSAENNVDNPQNLVSEVFSKELKGAISALASLQGNLLIA 1178
Query: 3233 SGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLS 3409
SGPKI LHKWTG++L GIAF+D PL+VVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQL+
Sbjct: 1179 SGPKIILHKWTGSDLTGIAFFDVPPLYVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLN 1238
Query: 3410 LLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFHA 3589
LLAKDF +LD +ATEFLIDGSTLSL V+D +KNIQI YYAPK ESW+GQKLL+RAEFH
Sbjct: 1239 LLAKDFGNLDCFATEFLIDGSTLSLAVADAQKNIQILYYAPKISESWRGQKLLTRAEFHV 1298
Query: 3590 GAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQTL 3769
GAHVTKFLRLQMLSTSSDRT PGSDKT R+ALLF +LDG IG IAPL+ELTFRRLQ+L
Sbjct: 1299 GAHVTKFLRLQMLSTSSDRTGKNPGSDKTVRYALLFGTLDGGIGSIAPLEELTFRRLQSL 1358
Query: 3770 QRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQI 3949
Q KLVD VPH GLNP+SFRQFRSNGKAHRPGPD++VDCELL YEML L++QLEIAQQI
Sbjct: 1359 QNKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDSIVDCELLFHYEMLSLEEQLEIAQQI 1418
Query: 3950 VTTRSQILSNLSDLSLGTSFL 4012
TTR QILSNL DLSLGTSFL
Sbjct: 1419 GTTRLQILSNLDDLSLGTSFL 1439
>ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Capsella rubella]
gi|482550876|gb|EOA15070.1| hypothetical protein
CARUB_v10028433mg [Capsella rubella]
Length = 1447
Score = 1861 bits (4821), Expect = 0.0
Identities = 920/1342 (68%), Positives = 1098/1342 (81%), Gaps = 5/1342 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ +L +G N + RDSI+L F+DAKI+VLE+DDS HGLR +SMHCFEGPDW +LK+GR
Sbjct: 121 SIAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMTSMHCFEGPDWLHLKKGR 180
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESF +GP+++ DP GRC GVL+YGLQM+ILKA+QVG GLVGDD+ +SGG VS R+ESSY
Sbjct: 181 ESFPRGPLVKVDPQGRCGGVLVYGLQMVILKASQVGSGLVGDDDAFSSGGTVSARVESSY 240
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTCM+SALSINT+LKQ
Sbjct: 241 IINLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCMLSALSINTTLKQ 300
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E
Sbjct: 301 HPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQE 360
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P S F+VELDAA+GTW+S DVA+ S+K+GELLLLTLIYDGR VQRL+L +SKASVL S
Sbjct: 361 LPASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASD 420
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSSLSS-ANMKDEIADSEGELHLAKRLCRTPSDA 1078
I +G+S FFL SRLGDSLL+Q+S + +S ++DE D EGE H AKRL R SD+
Sbjct: 421 ITSVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRL-RISSDS 479
Query: 1079 LLEVASYEELSLYGAT-NTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
+ EELSL+G+T N S+ AQK FSF VRDSL+NVGP++DF+YGLRINAD NATG +
Sbjct: 480 FQDTIGNEELSLFGSTPNNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVS 539
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSN+ELVCCSGHGKNG+LCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH D+SKM
Sbjct: 540 KQSNHELVCCSGHGKNGSLCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNVDSSKM 599
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
D+DEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG TIAAGNLFGRRRVIQ++
Sbjct: 600 AADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFE 659
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
GARILDGS+M QE+ FG NS+ +S SE+ V SVSIADPYVLL+M+D SI+LL+GD
Sbjct: 660 HGARILDGSFMNQELSFGAPNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPS 719
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
S I AC LYHDKG EPWLRK STDAWLS+G+ EA+D DG D
Sbjct: 720 TCTVSISSPSVLEGSKRKISACTLYHDKGPEPWLRKCSTDAWLSSGVGEAVDSTDGGPQD 779
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSE 2149
QGDI+C++CYESG LE FDV +F CVFSV+ F G+ HL D P + K SE
Sbjct: 780 QGDIFCVLCYESGALEIFDVPSFNCVFSVDKFASGRRHLSDM----PIHELEYELNKSSE 835
Query: 2150 ESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFED 2329
++ E +D K+VELAM RW GQ+TRPFL A+L+DGT+LCYHAYL+EG + K E+
Sbjct: 836 NNSSSRNEEIKDTKVVELAMQRWSGQHTRPFLFAVLADGTILCYHAYLFEGVDSI-KAEN 894
Query: 2330 AVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLS 2509
+VS + A +S S+LRNL+F+R+P+D +TRE +S+ VA RIT+FKN+ G+QG FLS
Sbjct: 895 SVSSEHPAALNSSGSSKLRNLKFLRIPLDTSTREGTSDGVASKRITMFKNISGHQGFFLS 954
Query: 2510 GSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNY 2689
GSRP W M+ RER+R H QLCDGSI AFTVLHNVNCNHG IYVTS+G LKICQLPS Y
Sbjct: 955 GSRPGWCMLFRERLRFHSQLCDGSIAAFTVLHNVNCNHGFIYVTSQGVLKICQLPSASIY 1014
Query: 2690 DNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDNV 2869
DNYWPV KIPL+ TPHQVTYYAE+NLYPLI+S+ V +PLNQVL S+ DQ+ DN N+
Sbjct: 1015 DNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSYPVSKPLNQVLSSLVDQEAGQQIDNHNL 1074
Query: 2870 NSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENET 3049
+SDDLQ+ YT++EFEIRILEP +SGG WET+A IPMQ+SE+ALTVRVVTL N T ENET
Sbjct: 1075 SSDDLQRTYTVEEFEIRILEPERSGGPWETKATIPMQSSEHALTVRVVTLLNASTGENET 1134
Query: 3050 LLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLLV 3229
LLA+GTAYVQGEDVAARGR+LL++F KN D+S NVV+EVYSKELKGA+SA+AS+QGHLL+
Sbjct: 1135 LLAVGTAYVQGEDVAARGRVLLFSFGKNGDNSPNVVTEVYSKELKGAISAVASIQGHLLI 1194
Query: 3230 ASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQL 3406
+SGPKI LHKWTGTELNG+AF+DA PL+VVS+N+VKNFILLGD+HKSIYFL+WKEQG+QL
Sbjct: 1195 SSGPKIILHKWTGTELNGVAFFDAPPLYVVSMNVVKNFILLGDVHKSIYFLSWKEQGSQL 1254
Query: 3407 SLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFH 3586
SLLAKDF SLD +ATEFLIDGSTLSL VSD++KN+QIFY+APK ESWKGQKLLSRAEFH
Sbjct: 1255 SLLAKDFGSLDCFATEFLIDGSTLSLAVSDEQKNVQIFYFAPKMAESWKGQKLLSRAEFH 1314
Query: 3587 AGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQT 3766
GAHVTKF RLQM+S+ GSDKTNR+A LF +LDGS GCIAPLDE+TFRRLQ+
Sbjct: 1315 VGAHVTKFQRLQMVSS---------GSDKTNRYASLFGTLDGSFGCIAPLDEVTFRRLQS 1365
Query: 3767 LQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQ 3946
LQ+KLVD VPH GLNP+SFRQF S+GKA R GPD+++DCELL YE+LPL++QLE+A Q
Sbjct: 1366 LQKKLVDAVPHVAGLNPRSFRQFCSSGKARRSGPDSIIDCELLCHYEILPLEEQLELAHQ 1425
Query: 3947 IVTTRSQILSNLSDLSLGTSFL 4012
+ TTRS IL NL DLS+GTSFL
Sbjct: 1426 VGTTRSLILDNLVDLSVGTSFL 1447
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 1860 bits (4819), Expect = 0.0
Identities = 944/1397 (67%), Positives = 1105/1397 (79%), Gaps = 60/1397 (4%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
SM ILS + + +RDSI+L FQ+AKI+VLE+DDS+H LRTSSMHCF+GP W +LKRGR
Sbjct: 114 SMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGR 173
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESFA+GPV++ DP GRC GVL+YGLQMIILKA+Q G GLV DDE + GA+S R+ESSY
Sbjct: 174 ESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSY 233
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDLD+KHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCM+SALSI+T+LKQ
Sbjct: 234 LINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMVSALSISTTLKQ 293
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSASN+PHDAYKLLAVPSPIGGVLVI AN+IHY SQS SC L LN++ + +SS +
Sbjct: 294 HPLIWSASNLPHDAYKLLAVPSPIGGVLVISANSIHYNSQSASCMLALNNYAVSADSSQD 353
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
MP+S F VELDAAN TWL DVA+ S+KTGELLLL L+YDGRVVQRL+L +SKASVLTSG
Sbjct: 354 MPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLTSG 413
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSSLSSA------------NMKDEIA-------- 1021
IA IG+S FFL SRLGDSLL+Q+S G S A N++ E+
Sbjct: 414 IASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEITYYTQNLQKEMVPPTLPSAL 473
Query: 1022 -------DSEGELHL--------------------------AKRLCRTPSDALLEVASYE 1102
++G + L R+ R +
Sbjct: 474 VHESKPTQAKGTIELNNNNLCVENDIVDVVEVDITNMTILGENRIARRDETLTDTQVGGD 533
Query: 1103 ELSLYG-ATNTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTAKQSNYELV 1279
ELSLYG A N +E AQK FSF VRDSLIN+GPL+DFSYGLRINADPNATG AKQSNYELV
Sbjct: 534 ELSLYGSAANNTESAQKIFSFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELV 593
Query: 1280 CCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM--DDDEYH 1453
CCSGHGKNGALC+L+QSIRPE+ITEVELPGCKGIWTVYHK +RG +AD+S+M DDDEYH
Sbjct: 594 CCSGHGKNGALCILRQSIRPEMITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYH 653
Query: 1454 AYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYARGARILDG 1633
AYLIISLE RTMVL T + L EVTESVDY+V G TIAAGNLFGRRRVIQ+Y GARILDG
Sbjct: 654 AYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGARILDG 713
Query: 1634 SYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXXXXXXXXXX 1813
S+MTQ++ V+ ++ + SE V+S SI+DPYVLL M+DGSI+LL+GD
Sbjct: 714 SFMTQDLNLVVNGNESGNASEGCTVLSASISDPYVLLTMTDGSIRLLVGDSSSCSVSVSA 773
Query: 1814 XXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYNDQGDIYCLV 1993
F SS + + +C LY DKG EPWLR TSTDAWLSTG+ E IDG DG DQGDIYC+
Sbjct: 774 PAAFGSSKKCVSSCTLYQDKGIEPWLRMTSTDAWLSTGVGETIDGTDGSLQDQGDIYCVA 833
Query: 1994 CYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYA---REPSATFQGSKGKVSEESNGF 2164
CY++G LE FDV NF VF V+ F+ GKSHL+D ++ S Q S+ +S N
Sbjct: 834 CYDNGDLEIFDVPNFTSVFYVDKFVSGKSHLVDHQISDLQKSSEVDQNSQELISHGRN-- 891
Query: 2165 LKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFEDAVSPQ 2344
E S++MK++E+AM RW GQ++RPFL IL+DGT+LCYHAYL+E + A K +D+VS
Sbjct: 892 --ESSQNMKVIEVAMQRWSGQHSRPFLFGILTDGTILCYHAYLFESTDSASKIDDSVSID 949
Query: 2345 KSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLSGSRPA 2524
S +S++S SRLRNLRF+RVP+DI RED N R++IFKN+ GYQGLFL GSRPA
Sbjct: 950 NSVSSSNMSSSRLRNLRFLRVPLDIQGREDMPNGTLSCRLSIFKNISGYQGLFLCGSRPA 1009
Query: 2525 WFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNYDNYWP 2704
WFMV RER+RVHPQLCDG IVAF VLHNVNCNHGLIYVTS+G LKICQLPS NYDNYWP
Sbjct: 1010 WFMVFRERLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGVLKICQLPSTSNYDNYWP 1069
Query: 2705 VHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDNVNSDDL 2884
V K+PL+GTPHQVTY+ E+NLYP+I+S V +PLNQVL S+ DQD+ H+ +N N+++D+L
Sbjct: 1070 VQKVPLKGTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVDQDVGHV-ENHNLSADEL 1128
Query: 2885 QKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENETLLAIG 3064
Q+ Y+++EFEIRILEP KSGG W+TRA I M +SENALT+RVVTL NT TKENETLLA+G
Sbjct: 1129 QQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVG 1188
Query: 3065 TAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLLVASGPK 3244
TAYVQGEDVAARGR+LL++ K+ D+SQ +VSEVYSKELKGA+SA+ASLQGHLL+ASGPK
Sbjct: 1189 TAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPK 1248
Query: 3245 ITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAK 3421
I LHKWTG ELNGIAFYD PL+VVSLNIVKNFILLGDIHKSIYFL+WKEQGAQLSLLAK
Sbjct: 1249 IILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAK 1308
Query: 3422 DFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFHAGAHV 3601
DF SLD YATEFLIDGSTLSL VSDD+KNIQIFYYAPK+ ESWKGQKLLSRAEFH GAHV
Sbjct: 1309 DFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHV 1368
Query: 3602 TKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQTLQRKL 3781
TKFLRLQMLSTSSD+ T SDKTNRFALLF +LDGSIGCIAPLDELTFRRLQ+LQ+KL
Sbjct: 1369 TKFLRLQMLSTSSDKACSTV-SDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL 1427
Query: 3782 VDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQIVTTR 3961
D VPH GLNP+SFRQF SNGK HR GPD++VDCELL YEMLPL++QL+IA QI TTR
Sbjct: 1428 GDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTR 1487
Query: 3962 SQILSNLSDLSLGTSFL 4012
SQILSNL+DLSLGTSFL
Sbjct: 1488 SQILSNLNDLSLGTSFL 1504
>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 1852 bits (4798), Expect = 0.0
Identities = 918/1342 (68%), Positives = 1101/1342 (82%), Gaps = 5/1342 (0%)
Frame = +2
Query: 2 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 181
S+ +L +G N + RDSI+L F+DAKI+VLE+DDS H LR +SMHCFEGPDW +LKRGR
Sbjct: 118 SIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGR 177
Query: 182 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 361
ESF +GP+++ DP GRC GVL+YGLQMIILK +QVG GLVGDD+ +SGG VS R+ESSY
Sbjct: 178 ESFPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSY 237
Query: 362 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 541
+INLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTC++SALSIN++LKQ
Sbjct: 238 IINLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQ 297
Query: 542 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 721
HP+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E
Sbjct: 298 HPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQE 357
Query: 722 MPKSKFAVELDAANGTWLSPDVAIFSSKTGELLLLTLIYDGRVVQRLELMRSKASVLTSG 901
+P S F+VELDAA+GTW+S DVA+ S+K+GELLLLTLIYDGR VQRL+L +SKASVL S
Sbjct: 358 LPASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASD 417
Query: 902 IAKIGSSFFFLASRLGDSLLIQYSSGTSSLSS-ANMKDEIADSEGELHLAKRLCRTPSDA 1078
I +G+S FFL SRLGDSLL+Q+S + +S ++DE D EGE H AKRL R SD
Sbjct: 418 ITSVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRL-RMTSDT 476
Query: 1079 LLEVASYEELSLYGAT-NTSEIAQKFFSFIVRDSLINVGPLRDFSYGLRINADPNATGTA 1255
+ EELSL+G+T + S+ AQK FSF VRDSL+NVGP++DF+YGLRINAD NATG +
Sbjct: 477 FQDTIGNEELSLFGSTPDNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVS 536
Query: 1256 KQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKGSRGHVADTSKM 1435
KQSNYELVCCSGHGKNGALCVL+QSIRPE+ITEVELPGCKGIWTVYHK SRGH AD+SKM
Sbjct: 537 KQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKM 596
Query: 1436 --DDDEYHAYLIISLENRTMVLETADDLGEVTESVDYYVQGSTIAAGNLFGRRRVIQIYA 1609
D+DEYHAYLIISLE RTMVLETAD L EVTESVDYYVQG TIAAGNLFGRRRVIQ++
Sbjct: 597 AADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFE 656
Query: 1610 RGARILDGSYMTQEVPFGVHNSDLSSNSEAPVVVSVSIADPYVLLKMSDGSIQLLIGDXX 1789
GARILDGS+M QE+ FG NS+ +S SE+ V SVSIADPYVLL+M+D SI+LL+GD
Sbjct: 657 HGARILDGSFMNQELSFGASNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPS 716
Query: 1790 XXXXXXXXXXXFASSTEPICACALYHDKGTEPWLRKTSTDAWLSTGIAEAIDGHDGLYND 1969
S I AC LYHDKG EPWLRK STDAWLS+G+ EA+D DG D
Sbjct: 717 TCTVSISSPSVLEGSKRKISACTLYHDKGPEPWLRKASTDAWLSSGVGEAVDSVDGGPQD 776
Query: 1970 QGDIYCLVCYESGTLEFFDVQNFKCVFSVENFIYGKSHLLDKYAREPSATFQGSKGKVSE 2149
QGDIYC+VCYESG LE FDV +F CVFSV+ F G+ HL D E ++ +K +
Sbjct: 777 QGDIYCVVCYESGALEIFDVPSFNCVFSVDKFASGRRHLSDMPIHE--LEYELNK---NS 831
Query: 2150 ESNGFLKELSRDMKIVELAMHRWPGQYTRPFLCAILSDGTMLCYHAYLYEGQEGAPKFED 2329
E N KE+ ++ ++VELAM RW G +TRPFL A+L+DGT+LCYHAYL++G + + K E+
Sbjct: 832 EDNTSSKEI-KNTRVVELAMQRWSGHHTRPFLFAVLADGTILCYHAYLFDGVD-STKAEN 889
Query: 2330 AVSPQKSADASSISGSRLRNLRFVRVPIDIATREDSSNVVARPRITIFKNVGGYQGLFLS 2509
++SP+ A +S S+LRNL+F+R+P+D +TRE +S+ VA RIT+FKN+ G+QG FLS
Sbjct: 890 SLSPENPAALNSSGSSKLRNLKFLRIPLDTSTREGTSDGVASQRITMFKNISGHQGFFLS 949
Query: 2510 GSRPAWFMVCRERVRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGYLKICQLPSLCNY 2689
GSRP W M+ RER+R H QLCDGSI AFTVLHNVNCNHG IYVT++G LKICQLPS Y
Sbjct: 950 GSRPGWCMLFRERLRFHSQLCDGSIAAFTVLHNVNCNHGFIYVTAQGVLKICQLPSASIY 1009
Query: 2690 DNYWPVHKIPLRGTPHQVTYYAERNLYPLILSFQVVRPLNQVLCSIADQDIVHMNDNDNV 2869
DNYWPV KIPL+ TPHQVTYYAE+NLYPLI+S+ V +PLNQVL S+ DQ+ DN N+
Sbjct: 1010 DNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSYPVSKPLNQVLSSLVDQEAGQQLDNHNM 1069
Query: 2870 NSDDLQKNYTIDEFEIRILEPGKSGGQWETRAKIPMQTSENALTVRVVTLFNTMTKENET 3049
+SDDLQ+ YT++EFEI+ILEP +SGG WET+AKIPMQTSE+ALTVRVVTL N T ENET
Sbjct: 1070 SSDDLQRTYTVEEFEIQILEPERSGGPWETKAKIPMQTSEHALTVRVVTLLNASTGENET 1129
Query: 3050 LLAIGTAYVQGEDVAARGRMLLYTFVKNVDSSQNVVSEVYSKELKGAVSAIASLQGHLLV 3229
LLA+GTAYVQGEDVAARGR+LL++F KN D+SQNVV+EVYS+ELKGA+SA+AS+QGHLL+
Sbjct: 1130 LLAVGTAYVQGEDVAARGRVLLFSFGKNGDNSQNVVTEVYSRELKGAISAVASIQGHLLI 1189
Query: 3230 ASGPKITLHKWTGTELNGIAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQL 3406
+SGPKI LHKW GTELNG+AF+DA PL+VVS+N+VK+FILLGD+HKSIYFL+WKEQG+QL
Sbjct: 1190 SSGPKIILHKWNGTELNGVAFFDAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQL 1249
Query: 3407 SLLAKDFASLDSYATEFLIDGSTLSLVVSDDKKNIQIFYYAPKTLESWKGQKLLSRAEFH 3586
SLLAKDF SLD +ATEFLIDGSTLSL VSD++KNIQ+FYYAPK +ESWKG KLLSRAEFH
Sbjct: 1250 SLLAKDFESLDCFATEFLIDGSTLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFH 1309
Query: 3587 AGAHVTKFLRLQMLSTSSDRTNITPGSDKTNRFALLFSSLDGSIGCIAPLDELTFRRLQT 3766
GAHV+KFLRLQM+S+ G+DK NRFALLF +LDGS GCIAPLDE+TFRRLQ+
Sbjct: 1310 VGAHVSKFLRLQMVSS---------GADKINRFALLFGTLDGSFGCIAPLDEVTFRRLQS 1360
Query: 3767 LQRKLVDVVPHTCGLNPKSFRQFRSNGKAHRPGPDNMVDCELLSQYEMLPLDKQLEIAQQ 3946
LQ+KLVD VPH GLNP +FRQFRS+GKA R GPD++VDCELL YEMLPL++QLE+A Q
Sbjct: 1361 LQKKLVDAVPHVAGLNPLAFRQFRSSGKARRSGPDSIVDCELLCHYEMLPLEEQLELAHQ 1420
Query: 3947 IVTTRSQILSNLSDLSLGTSFL 4012
I TTR IL +L DLS+GTSFL
Sbjct: 1421 IGTTRYSILKDLVDLSVGTSFL 1442