BLASTX nr result

ID: Zingiber24_contig00009735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00009735
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW23009.1| hypothetical protein PHAVU_004G011600g [Phaseolus...    64   2e-08
ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   8e-08
ref|XP_006579766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   2e-07

>gb|ESW23009.1| hypothetical protein PHAVU_004G011600g [Phaseolus vulgaris]
          Length = 757

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
 Frame = +3

Query: 3   TGYLYYWNPETNVTQYERPSDEXXXXXXXXXXXXXXXXXKSASVIAVSXXXXXXXXXXXX 182
           TGYLYYWNPETNVTQYERPS                   KS+SV + S            
Sbjct: 33  TGYLYYWNPETNVTQYERPSTS-------------AALPKSSSVPSSSVQVQHVSQGSQR 79

Query: 183 XXXXXXXXXIHQDGNGRSRNGHS--TKEKREGKISTGGQGSSVNVGRASSIPV------- 335
                      ++G+G S    S   +  + G  S+    +  N   + + PV       
Sbjct: 80  GHSPDFSDRYDRNGSGGSNEAGSRNNQSSKGGSYSSHSVPTGTNAAASVNYPVKGHGASE 139

Query: 336 -------EAYRRQNEIIVTGEDVPAPFMTF 404
                  E+YR ++EI VTG++VP P  +F
Sbjct: 140 AAAVLSPESYRSRHEITVTGDNVPPPLASF 169


>ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform X1
           [Glycine max]
          Length = 774

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 50/150 (33%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
 Frame = +3

Query: 3   TGYLYYWNPETNVTQYERPSDEXXXXXXXXXXXXXXXXXKSASVIAVSXXXXXXXXXXXX 182
           TGYLY+WNPETNVTQYERPS                   KS+SV   S            
Sbjct: 33  TGYLYFWNPETNVTQYERPSSS------------STAQPKSSSVPNSSVQVQQSSQGSQC 80

Query: 183 XXXXXXXXXIHQDGNG-----RSRNGHSTK-------EKREGKISTGGQGSSVNVGRAS- 323
                      ++G+G      SRN  S+K       +   G    G   SSV    AS 
Sbjct: 81  GHSPDFSDRYDRNGSGGSNEAGSRNNQSSKGGSYASHDVSNGTHVAGNVDSSVRGHGASD 140

Query: 324 ---SIPVEAYRRQNEIIVTGEDVPAPFMTF 404
               +  E+YR ++EI VTG++VP P  +F
Sbjct: 141 AGAGLSPESYRHRHEISVTGDNVPPPLASF 170


>ref|XP_006579766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform X2
           [Glycine max]
          Length = 775

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 47/151 (31%), Positives = 62/151 (41%), Gaps = 17/151 (11%)
 Frame = +3

Query: 3   TGYLYYWNPETNVTQYERPSDEXXXXXXXXXXXXXXXXXKSASVIAVSXXXXXXXXXXXX 182
           TGYLY+WNPETNVTQYERPS                   KS+SV   S            
Sbjct: 33  TGYLYFWNPETNVTQYERPSSS------------STAQPKSSSVPNSSVQVQQSSQGSQC 80

Query: 183 XXXXXXXXXIHQDGNGRSRNGHSTKEKREGKIST-------------GGQGSSVNVGRAS 323
                      ++G+G S    S   ++  K  +             G   SSV    AS
Sbjct: 81  GHSPDFSDRYDRNGSGGSNEAGSRNNQKSSKGGSYASHDVSNGTHVAGNVDSSVRGHGAS 140

Query: 324 ----SIPVEAYRRQNEIIVTGEDVPAPFMTF 404
                +  E+YR ++EI VTG++VP P  +F
Sbjct: 141 DAGAGLSPESYRHRHEISVTGDNVPPPLASF 171


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