BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00009566
         (1339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japo...   610   e-172
gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indi...   610   e-172
ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group] g...   610   e-172
ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Br...   608   e-171
ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Se...   602   e-170
tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...   602   e-169
tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...   602   e-169
ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Or...   598   e-168
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   596   e-168
ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [S...   595   e-167
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...   592   e-166
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i...   592   e-166
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...   590   e-166
dbj|BAJ96793.1| predicted protein [Hordeum vulgare subsp. vulgare]    589   e-166
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu...   584   e-164
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i...   583   e-164
gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 i...   583   e-164
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   583   e-164
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu...   580   e-163
ref|XP_002299520.2| DNA repair protein and transcription factor ...   580   e-163

>gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
          Length = 766

 Score =  610 bits (1573), Expect = e-172
 Identities = 309/427 (72%), Positives = 346/427 (81%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKP 237
            MAGGD +R R+ K+ K+  + S++  E                 +RE+K R+FT LELKP
Sbjct: 1    MAGGDGDRARAPKRHKSS-APSRSIDETAELDYTDDVDDDVRDADREVKKRDFTKLELKP 59

Query: 238  DHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSA 417
            DHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS 
Sbjct: 60   DHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119

Query: 418  GLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLL 597
            GLET T                  DFIH STANYGKVKLVLK NRYFV+S FPEVLK LL
Sbjct: 120  GLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 179

Query: 598  KDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPS 777
            KD++I +A+I+ E+S G+ + TISK+  E+   HE+LLDG+EL +A+E+KE +SFEIDPS
Sbjct: 180  KDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELAAATEDKETHSFEIDPS 239

Query: 778  QVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRA 957
            QVENVKQRCLPNALN+PMLEEY+  ND VNPDL + LKP+A+ RPYQ KSLSKMF NGRA
Sbjct: 240  QVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRA 299

Query: 958  RSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFT 1137
            RSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRFT
Sbjct: 300  RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFT 359

Query: 1138 SDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 1317
            SDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR
Sbjct: 360  SDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 419

Query: 1318 KVISITK 1338
            KVISITK
Sbjct: 420  KVISITK 426


>gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indica Group]
          Length = 766

 Score =  610 bits (1573), Expect = e-172
 Identities = 309/427 (72%), Positives = 346/427 (81%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKP 237
            MAGGD +R R+ K+ K+  + S++  E                 +RE+K R+FT LELKP
Sbjct: 1    MAGGDGDRARAPKRHKSS-APSRSIDETAELDYTDDVDDDVRDADREVKKRDFTKLELKP 59

Query: 238  DHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSA 417
            DHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS 
Sbjct: 60   DHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119

Query: 418  GLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLL 597
            GLET T                  DFIH STANYGKVKLVLK NRYFV+S FPEVLK LL
Sbjct: 120  GLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 179

Query: 598  KDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPS 777
            KD++I +A+I+ E+S G+ + TISK+  E+   HE+LLDG+EL +A+E+KE +SFEIDPS
Sbjct: 180  KDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELAAATEDKETHSFEIDPS 239

Query: 778  QVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRA 957
            QVENVKQRCLPNALN+PMLEEY+  ND VNPDL + LKP+A+ RPYQ KSLSKMF NGRA
Sbjct: 240  QVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRA 299

Query: 958  RSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFT 1137
            RSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRFT
Sbjct: 300  RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFT 359

Query: 1138 SDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 1317
            SDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR
Sbjct: 360  SDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 419

Query: 1318 KVISITK 1338
            KVISITK
Sbjct: 420  KVISITK 426


>ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group]
            gi|113533467|dbj|BAF05850.1| Os01g0691600 [Oryza sativa
            Japonica Group]
          Length = 580

 Score =  610 bits (1573), Expect = e-172
 Identities = 309/427 (72%), Positives = 346/427 (81%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKP 237
            MAGGD +R R+ K+ K+  + S++  E                 +RE+K R+FT LELKP
Sbjct: 1    MAGGDGDRARAPKRHKSS-APSRSIDETAELDYTDDVDDDVRDADREVKKRDFTKLELKP 59

Query: 238  DHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSA 417
            DHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS 
Sbjct: 60   DHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119

Query: 418  GLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLL 597
            GLET T                  DFIH STANYGKVKLVLK NRYFV+S FPEVLK LL
Sbjct: 120  GLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 179

Query: 598  KDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPS 777
            KD++I +A+I+ E+S G+ + TISK+  E+   HE+LLDG+EL +A+E+KE +SFEIDPS
Sbjct: 180  KDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELAAATEDKETHSFEIDPS 239

Query: 778  QVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRA 957
            QVENVKQRCLPNALN+PMLEEY+  ND VNPDL + LKP+A+ RPYQ KSLSKMF NGRA
Sbjct: 240  QVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRA 299

Query: 958  RSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFT 1137
            RSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRFT
Sbjct: 300  RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFT 359

Query: 1138 SDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 1317
            SDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR
Sbjct: 360  SDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFR 419

Query: 1318 KVISITK 1338
            KVISITK
Sbjct: 420  KVISITK 426


>ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Brachypodium distachyon]
          Length = 766

 Score =  608 bits (1567), Expect = e-171
 Identities = 310/428 (72%), Positives = 344/428 (80%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXX-GEREIKTREFTNLELK 234
            MAGGD +R R+ K+ K+   S  A  +E                G+ E+K R+FT LELK
Sbjct: 1    MAGGDGDRSRAPKRQKSSAPSKAALVDETAEMNYADDFDDDARDGDIEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
            PDH NRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   PDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  DFIHGSTANYGKVKLVLK NRYFV+S FPEVLK L
Sbjct: 121  VGLETTTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLKTL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L DEVI++A+ + E+S G  + T+SK+  EI   HE+LLDG+EL +A+E+KE +SFEIDP
Sbjct: 181  LNDEVIARARQSPEDSLGGPSFTVSKTAGEIASGHEDLLDGMELAAATEDKETHSFEIDP 240

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALN+PMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 241  SQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR 300

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRF
Sbjct: 301  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHISRF 360

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 361  TSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 420

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 421  RKVISITK 428


>ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Setaria italica]
          Length = 765

 Score =  602 bits (1553), Expect = e-170
 Identities = 309/428 (72%), Positives = 342/428 (79%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKA-TQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELK 234
            MAGGD +R R+ K+ K+   S  A   E                   E+K R+FT LELK
Sbjct: 1    MAGGDGDRHRAPKRHKSSAPSKAALVDESAEFDYADDFDDDALDANTEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
            PDHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   PDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  DFIHGSTANYGKVKLVLK NRYFV+S FPEVL  L
Sbjct: 121  VGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSNL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L D+VISKA+I+ E+S G+ + TISK+  +  G HE LL+G++L +A+E+KE +SFEIDP
Sbjct: 181  LNDDVISKARISPEDSLGASSFTISKTSGQASG-HEELLNGMDLAAATEDKETHSFEIDP 239

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 240  SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR 299

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ ++ISRF
Sbjct: 300  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDDHISRF 359

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 360  TSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 419

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 420  RKVISITK 427


>tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 767

 Score =  602 bits (1551), Expect = e-169
 Identities = 307/428 (71%), Positives = 343/428 (80%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKA-TQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELK 234
            MAGGD +R R+ K+ K+   S  A   E                 + E+K R+FT LELK
Sbjct: 1    MAGGDGDRHRAPKRHKSSTPSKAALVDESAEFDYADDFDDDAHDADTEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
             DHA+RP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   VDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  DFIHGSTANYGKVKLVLK NRYFV+S FPEVL  L
Sbjct: 121  VGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L+DEVIS+A+I+ E+S G+ + T+SK+  +I   HE+LL+G+E+ +A+E+KE +SFEIDP
Sbjct: 181  LRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDP 240

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 241  SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR 300

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ ENISRF
Sbjct: 301  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENISRF 360

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE F G AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 361  TSDNKEKFTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 420

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 421  RKVISITK 428


>tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 702

 Score =  602 bits (1551), Expect = e-169
 Identities = 307/428 (71%), Positives = 343/428 (80%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKA-TQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELK 234
            MAGGD +R R+ K+ K+   S  A   E                 + E+K R+FT LELK
Sbjct: 1    MAGGDGDRHRAPKRHKSSTPSKAALVDESAEFDYADDFDDDAHDADTEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
             DHA+RP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   VDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  DFIHGSTANYGKVKLVLK NRYFV+S FPEVL  L
Sbjct: 121  VGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L+DEVIS+A+I+ E+S G+ + T+SK+  +I   HE+LL+G+E+ +A+E+KE +SFEIDP
Sbjct: 181  LRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDP 240

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 241  SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR 300

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ ENISRF
Sbjct: 301  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENISRF 360

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE F G AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 361  TSDNKEKFTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 420

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 421  RKVISITK 428


>ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Oryza brachyantha]
          Length = 918

 Score =  598 bits (1542), Expect = e-168
 Identities = 297/383 (77%), Positives = 328/383 (85%)
 Frame = +1

Query: 190  EREIKTREFTNLELKPDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELI 369
            +RE+K R+FT LELKPDHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +
Sbjct: 197  DREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 256

Query: 370  HEYNLTPHSLYAAVSAGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNN 549
            HEYNLTPHSLYAAVS GLET T                  DFIH STANYGKVKLVLK N
Sbjct: 257  HEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 316

Query: 550  RYFVKSQFPEVLKRLLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELD 729
            RYFV+S FPEVLK LL+D++IS+A I+ E+S G+ + T+SK+  E+   HE+LLDG+EL 
Sbjct: 317  RYFVESPFPEVLKTLLRDDIISRAWISPEDSVGAPSFTVSKTAGEMASGHEDLLDGMELA 376

Query: 730  SASEEKEIYSFEIDPSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRR 909
            +A+E+KE +SFEIDPSQVENVKQRCLPNALN+PMLEEY+  ND VNPDL + LKP+A+ R
Sbjct: 377  AATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPR 436

Query: 910  PYQIKSLSKMFSNGRARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQ 1089
            PYQ KSLSKMF NGRARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQ
Sbjct: 437  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 496

Query: 1090 FTLWSTIQKENISRFTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWG 1269
            F LWSTI+ E+ISRFTSDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWG
Sbjct: 497  FKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 556

Query: 1270 LLLMDEVHVVPAHMFRKVISITK 1338
            LLLMDEVHVVPAHMFRKVISITK
Sbjct: 557  LLLMDEVHVVPAHMFRKVISITK 579


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  596 bits (1537), Expect = e-168
 Identities = 307/429 (71%), Positives = 342/429 (79%), Gaps = 5/429 (1%)
 Frame = +1

Query: 67   GDEERGRSSKKLKARFSSSKATQ-----EEXXXXXXXXXXXXXXXGEREIKTREFTNLEL 231
            G  E+GR SK+ K   SSSK        E+               GE+E K R+FT LEL
Sbjct: 2    GHGEKGRPSKRHK---SSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLEL 58

Query: 232  KPDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAV 411
            K DH+NRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAV
Sbjct: 59   KVDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAV 118

Query: 412  SAGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKR 591
            S GLETET                  DFIH STANYGKVKLVLK NRYFV+S FPEVLK 
Sbjct: 119  SVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKT 178

Query: 592  LLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEID 771
            LL+DEVIS+++I+ E S G+D  TISK+V EI G H+ L++  EL +A+EEKE +SFE+D
Sbjct: 179  LLRDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVD 238

Query: 772  PSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNG 951
            P+QVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NG
Sbjct: 239  PAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 298

Query: 952  RARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISR 1131
            RARSGIIVLPCGAGKSLVGVSAAC I+KSCLCLATNAVSVDQWAFQF LWSTI+ E I R
Sbjct: 299  RARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICR 358

Query: 1132 FTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHM 1311
            FTSD+KE FRG+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHM
Sbjct: 359  FTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM 418

Query: 1312 FRKVISITK 1338
            FRKVISITK
Sbjct: 419  FRKVISITK 427


>ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
            gi|241928157|gb|EES01302.1| hypothetical protein
            SORBIDRAFT_03g031750 [Sorghum bicolor]
          Length = 767

 Score =  595 bits (1533), Expect = e-167
 Identities = 304/428 (71%), Positives = 339/428 (79%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKA-TQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELK 234
            MAGGD +R R  K+ K+   S  A   E                 + E+K R+FT LELK
Sbjct: 1    MAGGDGDRHRGPKRHKSSAPSKAALVDESAEFDYADDFDDDAHDADMEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
             DHA+RP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   VDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  DFIH STANYGKVKLVLK NRYFV+S FPEVL  L
Sbjct: 121  VGLETSTIISVLSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLSNL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L+DEVIS+A+I+ E+S G+ + T+SK+  +I   HE+LL+G+E+ +A+E+KE +SFEIDP
Sbjct: 181  LRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDP 240

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALNYPMLEEY+  ND VNPDL + LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 241  SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGR 300

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRF
Sbjct: 301  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRF 360

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE F G A VVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 361  TSDNKEKFTGMASVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 420

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 421  RKVISITK 428


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score =  592 bits (1526), Expect = e-166
 Identities = 300/425 (70%), Positives = 337/425 (79%), Gaps = 1/425 (0%)
 Frame = +1

Query: 67   GDEERGRSSKKLK-ARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPDH 243
            G  ++ R SKK+K A     +A+  +               GERE K  +FT LELKPDH
Sbjct: 5    GHGDKSRPSKKIKFASKEEYRASTADDDQYYPEEGGDDFHDGEREGKKMDFTKLELKPDH 64

Query: 244  ANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAGL 423
            ANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS GL
Sbjct: 65   ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 124

Query: 424  ETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLLKD 603
            ETET                  DFIH STANYGKVKLVLK NRYF++S FPEVLKRLL D
Sbjct: 125  ETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLAD 184

Query: 604  EVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPSQV 783
            + I KA+I+ E   G D  T+SK V+EI G H+ L++ V++ +A+EEKE +SFEIDP+QV
Sbjct: 185  DAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQV 244

Query: 784  ENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRARS 963
            ENVKQRCLPNALNYPM+EEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGRARS
Sbjct: 245  ENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARS 304

Query: 964  GIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFTSD 1143
            GIIVLPCGAGKSLVGVSAA  IKKSCLCLATNAVSVDQWAFQF LWSTI++E I RFTSD
Sbjct: 305  GIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSD 364

Query: 1144 NKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 1323
            +KE FRG+ GVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV
Sbjct: 365  SKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 424

Query: 1324 ISITK 1338
            ISITK
Sbjct: 425  ISITK 429


>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
            cacao]
          Length = 771

 Score =  592 bits (1526), Expect = e-166
 Identities = 302/426 (70%), Positives = 340/426 (79%), Gaps = 2/426 (0%)
 Frame = +1

Query: 67   GDEERGRSSKKLK--ARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPD 240
            G  E+GR +KKLK  A+     +T E+               GE E K R+F+ LELKPD
Sbjct: 2    GHGEKGRPTKKLKFAAKDDHRSSTVEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKPD 61

Query: 241  HANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAG 420
            HANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS G
Sbjct: 62   HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 121

Query: 421  LETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLLK 600
            LETET                  DFIH STANYGKVKLVLK NRYF++S FPEVLK+LL+
Sbjct: 122  LETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQ 181

Query: 601  DEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPSQ 780
            D+VI++A+I  E++ GSD  TISK+  EI   H+ LL+  EL +A+EEKE ++FEIDP+Q
Sbjct: 182  DDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQ 241

Query: 781  VENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRAR 960
            VENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP A+ RPYQ KSLSKMF NGRAR
Sbjct: 242  VENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 301

Query: 961  SGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFTS 1140
            SGIIVLPCGAGKSLVGVSAA  IKKSCLCLATNAVSVDQWAFQF LWSTI+ + I RFTS
Sbjct: 302  SGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 361

Query: 1141 DNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 1320
            D+KE FRG+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 362  DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 421

Query: 1321 VISITK 1338
            VIS+TK
Sbjct: 422  VISLTK 427


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score =  590 bits (1522), Expect = e-166
 Identities = 299/425 (70%), Positives = 336/425 (79%), Gaps = 1/425 (0%)
 Frame = +1

Query: 67   GDEERGRSSKKLK-ARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPDH 243
            G  ++ R SKK+K A     +A+  +               GERE K  +FT LELKPDH
Sbjct: 5    GHGDKSRPSKKIKFASKEEYRASTADDDHYYPEEGGDDFHDGEREGKKMDFTKLELKPDH 64

Query: 244  ANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAGL 423
             NRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS GL
Sbjct: 65   GNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 124

Query: 424  ETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLLKD 603
            ETET                  DFIH STANYGKVKLVLK NRYF++S FPEVLKRLL D
Sbjct: 125  ETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLAD 184

Query: 604  EVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPSQV 783
            + I KA+I+ E   G D  T+SK V+EI G H+ L++ V++ +A+EEKE +SFEIDP+QV
Sbjct: 185  DAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQV 244

Query: 784  ENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRARS 963
            ENVKQRCLPNALNYPM+EEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGRARS
Sbjct: 245  ENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARS 304

Query: 964  GIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFTSD 1143
            GIIVLPCGAGKSLVGVSAA  IKKSCLCLATNAVSVDQWAFQF LWSTI++E I RFTSD
Sbjct: 305  GIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSD 364

Query: 1144 NKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 1323
            +KE FRG+ GVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV
Sbjct: 365  SKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 424

Query: 1324 ISITK 1338
            ISITK
Sbjct: 425  ISITK 429


>dbj|BAJ96793.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 762

 Score =  589 bits (1519), Expect = e-166
 Identities = 302/428 (70%), Positives = 336/428 (78%), Gaps = 1/428 (0%)
 Frame = +1

Query: 58   MAGGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXX-GEREIKTREFTNLELK 234
            MAGGD +R R+ K+ K+   S  A  +E                G+ E+K R+FT LELK
Sbjct: 1    MAGGDGDRARAPKRYKSSAPSKAALVDETAEMNYADDFDDDARDGDNEVKKRDFTKLELK 60

Query: 235  PDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVS 414
            PDH NRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS
Sbjct: 61   PDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 120

Query: 415  AGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRL 594
             GLET T                  +FIHGSTANYGKVKLVLK N+YFV+S FPEVL++L
Sbjct: 121  VGLETNTIISVLSKLSKTKLPHEIIEFIHGSTANYGKVKLVLKKNQYFVESPFPEVLEKL 180

Query: 595  LKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDP 774
            L D+VISKA+   E+  G     +SK+  EI   H+ LLDG EL  A+E+KE +SFE+  
Sbjct: 181  LNDDVISKARKAPEDCLGGSAFAVSKAAREIASGHD-LLDGTELADANEDKETHSFEVYS 239

Query: 775  SQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGR 954
            SQVENVKQRCLPNALN+PMLEEY+  ND VNPDL++ LKP+A+ RPYQ KSLSKMF NGR
Sbjct: 240  SQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR 299

Query: 955  ARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRF 1134
            ARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI+ E+ISRF
Sbjct: 300  ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHISRF 359

Query: 1135 TSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 1314
            TSDNKE FRG AGVVVTTYNM+AFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
Sbjct: 360  TSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF 419

Query: 1315 RKVISITK 1338
            RKVISITK
Sbjct: 420  RKVISITK 427


>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346907|gb|ERP65332.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 786

 Score =  584 bits (1506), Expect = e-164
 Identities = 299/425 (70%), Positives = 335/425 (78%)
 Frame = +1

Query: 64   GGDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPDH 243
            G  ++ GR +KK K  F++    +                    E K R+F+ LELKPDH
Sbjct: 2    GHGDKSGRPNKKFK--FTTKDDYRSSVAEDDAFYPEEAGDDFRDEGKKRDFSKLELKPDH 59

Query: 244  ANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAGL 423
            ANRP+WAC DGRIFLETFS  YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS GL
Sbjct: 60   ANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 119

Query: 424  ETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLLKD 603
            ETET                  DFIHGSTANYGKVKLVLK NRYF++S F EVLK+LLKD
Sbjct: 120  ETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEVLKKLLKD 179

Query: 604  EVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPSQV 783
            EVI+KA+I  E+S G++  TISK+  EI   H+ LL+  EL +A+EEKE +SFE+DPSQV
Sbjct: 180  EVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQV 239

Query: 784  ENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRARS 963
            ENVKQRCLPNALNYPMLEEY+  ND VNPDLN+ LKP A+ RPYQ KSLSKMF NGRARS
Sbjct: 240  ENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARS 299

Query: 964  GIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFTSD 1143
            GIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF+LWS I ++ I RFTSD
Sbjct: 300  GIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTSD 359

Query: 1144 NKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 1323
            +KE F+G+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV
Sbjct: 360  SKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 419

Query: 1324 ISITK 1338
            ISITK
Sbjct: 420  ISITK 424


>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
            [Theobroma cacao]
          Length = 742

 Score =  583 bits (1502), Expect = e-164
 Identities = 291/384 (75%), Positives = 324/384 (84%)
 Frame = +1

Query: 187  GEREIKTREFTNLELKPDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPEL 366
            GE E K R+F+ LELKPDHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE 
Sbjct: 65   GENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPES 124

Query: 367  IHEYNLTPHSLYAAVSAGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKN 546
            +HEYNLTPHSLYAAVS GLETET                  DFIH STANYGKVKLVLK 
Sbjct: 125  MHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKK 184

Query: 547  NRYFVKSQFPEVLKRLLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVEL 726
            NRYF++S FPEVLK+LL+D+VI++A+I  E++ GSD  TISK+  EI   H+ LL+  EL
Sbjct: 185  NRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAEL 244

Query: 727  DSASEEKEIYSFEIDPSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKR 906
             +A+EEKE ++FEIDP+QVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP A+ 
Sbjct: 245  AAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQP 304

Query: 907  RPYQIKSLSKMFSNGRARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAF 1086
            RPYQ KSLSKMF NGRARSGIIVLPCGAGKSLVGVSAA  IKKSCLCLATNAVSVDQWAF
Sbjct: 305  RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAF 364

Query: 1087 QFTLWSTIQKENISRFTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREW 1266
            QF LWSTI+ + I RFTSD+KE FRG+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREW
Sbjct: 365  QFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREW 424

Query: 1267 GLLLMDEVHVVPAHMFRKVISITK 1338
            GLLLMDEVHVVPAHMFRKVIS+TK
Sbjct: 425  GLLLMDEVHVVPAHMFRKVISLTK 448


>gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
            [Theobroma cacao]
          Length = 809

 Score =  583 bits (1502), Expect = e-164
 Identities = 291/384 (75%), Positives = 324/384 (84%)
 Frame = +1

Query: 187  GEREIKTREFTNLELKPDHANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPEL 366
            GE E K R+F+ LELKPDHANRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE 
Sbjct: 65   GENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPES 124

Query: 367  IHEYNLTPHSLYAAVSAGLETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKN 546
            +HEYNLTPHSLYAAVS GLETET                  DFIH STANYGKVKLVLK 
Sbjct: 125  MHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKK 184

Query: 547  NRYFVKSQFPEVLKRLLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVEL 726
            NRYF++S FPEVLK+LL+D+VI++A+I  E++ GSD  TISK+  EI   H+ LL+  EL
Sbjct: 185  NRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAEL 244

Query: 727  DSASEEKEIYSFEIDPSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKR 906
             +A+EEKE ++FEIDP+QVENVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP A+ 
Sbjct: 245  AAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQP 304

Query: 907  RPYQIKSLSKMFSNGRARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAF 1086
            RPYQ KSLSKMF NGRARSGIIVLPCGAGKSLVGVSAA  IKKSCLCLATNAVSVDQWAF
Sbjct: 305  RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAF 364

Query: 1087 QFTLWSTIQKENISRFTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREW 1266
            QF LWSTI+ + I RFTSD+KE FRG+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREW
Sbjct: 365  QFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREW 424

Query: 1267 GLLLMDEVHVVPAHMFRKVISITK 1338
            GLLLMDEVHVVPAHMFRKVIS+TK
Sbjct: 425  GLLLMDEVHVVPAHMFRKVISLTK 448


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  583 bits (1502), Expect = e-164
 Identities = 300/424 (70%), Positives = 336/424 (79%)
 Frame = +1

Query: 67   GDEERGRSSKKLKARFSSSKATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPDHA 246
            G  E+GR SKK K+     ++T  E                + E K ++F+ LELK DHA
Sbjct: 2    GHGEKGRPSKKQKSSNDDHRSTIMEDEDVYCGEDMEDDRPDDGEGKKKDFSKLELKLDHA 61

Query: 247  NRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAGLE 426
            NRP+WAC DGRIFLETFSP YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS GLE
Sbjct: 62   NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLE 121

Query: 427  TETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPEVLKRLLKDE 606
            TET                  DFIHGSTANYGKVKLVLK NRY V+S FPEVLKRLLKDE
Sbjct: 122  TETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDE 181

Query: 607  VISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSASEEKEIYSFEIDPSQVE 786
            VIS+A++  E +  + + TISK+  EI   H+ LL+  EL +A+EEKE +SFE+DPSQVE
Sbjct: 182  VISRARLVSE-AHVNGSFTISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVE 240

Query: 787  NVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQIKSLSKMFSNGRARSG 966
            NVKQRCLPNALNYPMLEEY+  ND VNPDL++ LKP A+ RPYQ KSLSKMF NGRARSG
Sbjct: 241  NVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSG 300

Query: 967  IIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTLWSTIQKENISRFTSDN 1146
            IIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF LWSTI++E I RFTSD+
Sbjct: 301  IIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDS 360

Query: 1147 KENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVI 1326
            KE F+G+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVI
Sbjct: 361  KERFQGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVI 420

Query: 1327 SITK 1338
            S+TK
Sbjct: 421  SLTK 424


>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346909|gb|ERP65333.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 783

 Score =  580 bits (1494), Expect = e-163
 Identities = 301/440 (68%), Positives = 337/440 (76%), Gaps = 15/440 (3%)
 Frame = +1

Query: 64   GGDEERGRSSKKLKARFSSS-KATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPD 240
            G  ++ GR +KK K       +++  E               GE E K R+F+ LELKPD
Sbjct: 2    GHGDKSGRPNKKFKFTTKDDYRSSVAEDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPD 61

Query: 241  HANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAG 420
            HANRP+WAC DGRIFLETFS  YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS G
Sbjct: 62   HANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 121

Query: 421  LETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPE------- 579
            LETET                  DFIHGSTANYGKVKLVLK NRYF++S F E       
Sbjct: 122  LETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVS 181

Query: 580  -------VLKRLLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSAS 738
                   VLK+LLKDEVI+KA+I  E+S G++  TISK+  EI   H+ LL+  EL +A+
Sbjct: 182  GFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAA 241

Query: 739  EEKEIYSFEIDPSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQ 918
            EEKE +SFE+DPSQVENVKQRCLPNALNYPMLEEY+  ND VNPDLN+ LKP A+ RPYQ
Sbjct: 242  EEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQ 301

Query: 919  IKSLSKMFSNGRARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTL 1098
             KSLSKMF NGRARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF+L
Sbjct: 302  EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSL 361

Query: 1099 WSTIQKENISRFTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLL 1278
            WS I ++ I RFTSD+KE F+G+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLL
Sbjct: 362  WSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLL 421

Query: 1279 MDEVHVVPAHMFRKVISITK 1338
            MDEVHVVPAHMFRKVISITK
Sbjct: 422  MDEVHVVPAHMFRKVISITK 441


>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
            gi|550346908|gb|EEE84325.2| DNA repair protein and
            transcription factor [Populus trichocarpa]
          Length = 803

 Score =  580 bits (1494), Expect = e-163
 Identities = 301/440 (68%), Positives = 337/440 (76%), Gaps = 15/440 (3%)
 Frame = +1

Query: 64   GGDEERGRSSKKLKARFSSS-KATQEEXXXXXXXXXXXXXXXGEREIKTREFTNLELKPD 240
            G  ++ GR +KK K       +++  E               GE E K R+F+ LELKPD
Sbjct: 2    GHGDKSGRPNKKFKFTTKDDYRSSVAEDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPD 61

Query: 241  HANRPIWACPDGRIFLETFSPFYKQAYDFLIAIAEPVTRPELIHEYNLTPHSLYAAVSAG 420
            HANRP+WAC DGRIFLETFS  YKQAYDFLIAIAEPV RPE +HEYNLTPHSLYAAVS G
Sbjct: 62   HANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 121

Query: 421  LETETXXXXXXXXXXXXXXXXXXDFIHGSTANYGKVKLVLKNNRYFVKSQFPE------- 579
            LETET                  DFIHGSTANYGKVKLVLK NRYF++S F E       
Sbjct: 122  LETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVS 181

Query: 580  -------VLKRLLKDEVISKAQINFENSQGSDTLTISKSVHEIHGVHENLLDGVELDSAS 738
                   VLK+LLKDEVI+KA+I  E+S G++  TISK+  EI   H+ LL+  EL +A+
Sbjct: 182  GFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAA 241

Query: 739  EEKEIYSFEIDPSQVENVKQRCLPNALNYPMLEEYNVHNDIVNPDLNIALKPEAKRRPYQ 918
            EEKE +SFE+DPSQVENVKQRCLPNALNYPMLEEY+  ND VNPDLN+ LKP A+ RPYQ
Sbjct: 242  EEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQ 301

Query: 919  IKSLSKMFSNGRARSGIIVLPCGAGKSLVGVSAACSIKKSCLCLATNAVSVDQWAFQFTL 1098
             KSLSKMF NGRARSGIIVLPCGAGKSLVGVSAAC IKKSCLCLATNAVSVDQWAFQF+L
Sbjct: 302  EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSL 361

Query: 1099 WSTIQKENISRFTSDNKENFRGSAGVVVTTYNMIAFGGKRSEDSEKIIEEIRNREWGLLL 1278
            WS I ++ I RFTSD+KE F+G+AGVVVTTYNM+AFGGKRSE+SEKIIEEIRNREWGLLL
Sbjct: 362  WSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLL 421

Query: 1279 MDEVHVVPAHMFRKVISITK 1338
            MDEVHVVPAHMFRKVISITK
Sbjct: 422  MDEVHVVPAHMFRKVISITK 441