BLASTX nr result

ID: Zingiber24_contig00009480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00009480
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB73698.1| hypothetical protein L484_026861 [Morus notabilis]      55   7e-06
ref|XP_002874355.1| hypothetical protein ARALYDRAFT_910810 [Arab...    55   1e-05

>gb|EXB73698.1| hypothetical protein L484_026861 [Morus notabilis]
          Length = 110

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
 Frame = -3

Query: 202 DSEISRRLLAGSDPRGLSYGGFDPNKPVCKSQNGQPYNCAG----RSGNPPRRGCSIYYK 35
           +SEISRR+LA    + ++ G   P++PVCK   G+ Y+ AG       NPP RGC  YY+
Sbjct: 48  ESEISRRVLA--QRKYITPGALKPDQPVCKGAKGEAYSKAGDCLPEQSNPPDRGCQKYYR 105

Query: 34  CR 29
           CR
Sbjct: 106 CR 107


>ref|XP_002874355.1| hypothetical protein ARALYDRAFT_910810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320192|gb|EFH50614.1| hypothetical protein
           ARALYDRAFT_910810 [Arabidopsis lyrata subsp. lyrata]
          Length = 116

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 268 GSGSRCRXXXXXXXXXXXEFQFDSEISRRLLAGSDPRGLSYGGFDPNKPVCKSQNGQPYN 89
           G+ S C+           EF+FDSEIS+R+LA    + +SYG    N   C  +    YN
Sbjct: 37  GTTSNCKGSIAECIAEEEEFEFDSEISKRILASK--KYISYGAMRKNNVPCSRRGASYYN 94

Query: 88  C-AGRSGNPPRRGCSIYYKCR 29
           C  G   NP  RGCS   +CR
Sbjct: 95  CKRGAQANPYSRGCSTITRCR 115


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