BLASTX nr result
ID: Zingiber24_contig00009417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00009417
(322 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 127 1e-27
emb|CBI17177.3| unnamed protein product [Vitis vinifera] 127 1e-27
emb|CAN69818.1| hypothetical protein VITISV_037064 [Vitis vinifera] 127 1e-27
ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [A... 127 2e-27
ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding pro... 125 6e-27
ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group] g... 125 8e-27
ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding pro... 123 2e-26
gb|EMS55766.1| RuBisCO large subunit-binding protein subunit alp... 122 4e-26
ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citr... 122 5e-26
ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [S... 122 5e-26
ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding pro... 122 7e-26
gb|EPS67631.1| hypothetical protein M569_07141, partial [Genlise... 120 1e-25
ref|XP_006340213.1| PREDICTED: ruBisCO large subunit-binding pro... 119 4e-25
ref|XP_004251160.1| PREDICTED: ruBisCO large subunit-binding pro... 119 4e-25
ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni... 119 6e-25
gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alp... 118 9e-25
gb|EOY34440.1| RuBisCO large subunit-binding protein subunit alp... 118 9e-25
ref|XP_004241283.1| PREDICTED: ruBisCO large subunit-binding pro... 118 9e-25
gb|AFW77798.1| chloroplast protein synthesis2 [Zea mays] 117 2e-24
ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding pro... 117 2e-24
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 127 bits (320), Expect = 1e-27
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSD-----ARRKLVVRAMAKDIAFDQSSRS 125
MASANA+STASI RS P+QE RRR QG + + VVRA AK+IAFDQSSR+
Sbjct: 1 MASANAISTASIIRS-PKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRA 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
+LQAG++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 ALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>emb|CBI17177.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 127 bits (320), Expect = 1e-27
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSD-----ARRKLVVRAMAKDIAFDQSSRS 125
MASANA+STASI RS P+QE RRR QG + + VVRA AK+IAFDQSSR+
Sbjct: 1 MASANAISTASIIRS-PKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRA 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
+LQAG++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 ALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>emb|CAN69818.1| hypothetical protein VITISV_037064 [Vitis vinifera]
Length = 576
Score = 127 bits (320), Expect = 1e-27
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSD-----ARRKLVVRAMAKDIAFDQSSRS 125
MASANA+STASI RS P+QE RRR QG + + VVRA AK+IAFDQSSR+
Sbjct: 1 MASANAISTASIIRS-PKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRA 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
+LQAG++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 ALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [Amborella trichopoda]
gi|548832044|gb|ERM94840.1| hypothetical protein
AMTR_s00009p00080200 [Amborella trichopoda]
Length = 581
Score = 127 bits (319), Expect = 2e-27
Identities = 66/96 (68%), Positives = 81/96 (84%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MA+ANA S+A + RSSP+Q LRR+ +HG S + VVRA AKDIAFDQSSR++LQAG
Sbjct: 1 MAAANAFSSA-VLRSSPQQGGLRRKVSHGSNSRTVGRFVVRARAKDIAFDQSSRAALQAG 59
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
++KLA+AVG+TLGPRGRNVVLDE+G P+VVNDGVTI
Sbjct: 60 IDKLADAVGITLGPRGRNVVLDEFGNPRVVNDGVTI 95
>ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Brachypodium distachyon]
Length = 578
Score = 125 bits (314), Expect = 6e-27
Identities = 69/96 (71%), Positives = 78/96 (81%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ RS Q +RR + ++LVVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLLRSFSSQGRVRR-----SRNGRAQRLVVRADAKDIAFDQKSRAALQAG 55
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYG+PKVVNDGVTI
Sbjct: 56 VEKLANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTI 91
>ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group]
gi|77554291|gb|ABA97087.1| RuBisCO subunit
binding-protein alpha subunit, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113649074|dbj|BAF29586.1| Os12g0277500 [Oryza sativa
Japonica Group] gi|125536273|gb|EAY82761.1| hypothetical
protein OsI_37967 [Oryza sativa Indica Group]
gi|313575777|gb|ADR66968.1| 60 kDa chaperonin alpha
subunit [Oryza sativa Japonica Group]
Length = 578
Score = 125 bits (313), Expect = 8e-27
Identities = 69/96 (71%), Positives = 78/96 (81%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ RS Q +RR + ++LVVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLLRSFSSQGRVRRA-----KNGRAQRLVVRADAKDIAFDQKSRAALQAG 55
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYG+PKVVNDGVTI
Sbjct: 56 VEKLANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTI 91
>ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Setaria italica]
Length = 577
Score = 123 bits (309), Expect = 2e-26
Identities = 69/96 (71%), Positives = 78/96 (81%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ R P + RR +G+ ++ VVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLLR--PLSQGRARRARNGRS----QRFVVRADAKDIAFDQKSRAALQAG 54
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI
Sbjct: 55 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 90
>gb|EMS55766.1| RuBisCO large subunit-binding protein subunit alpha, chloroplastic
[Triticum urartu]
Length = 613
Score = 122 bits (307), Expect = 4e-26
Identities = 70/96 (72%), Positives = 79/96 (82%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ RS Q LRR +G+ S +LVVRA AK+IAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLLRSFSSQGRLRRS-KNGRSS----RLVVRADAKEIAFDQKSRAALQAG 55
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLA+AVGVTLGPRGRNVVLDEYG PKVVNDGVTI
Sbjct: 56 VEKLASAVGVTLGPRGRNVVLDEYGNPKVVNDGVTI 91
>ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citrus clementina]
gi|557526450|gb|ESR37756.1| hypothetical protein
CICLE_v10028085mg [Citrus clementina]
Length = 582
Score = 122 bits (306), Expect = 5e-26
Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDAR-RKLVVRAMAKDIAFDQSSRSSLQA 113
MASANA+S+ASI SP+Q LRRR QG R+ VRA AKDIAFDQ SR+++QA
Sbjct: 1 MASANALSSASIL-CSPKQGSLRRRGNQNQGQRVNYRRFAVRASAKDIAFDQRSRAAMQA 59
Query: 112 GVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
G++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 GIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 96
>ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [Sorghum bicolor]
gi|241946172|gb|EES19317.1| hypothetical protein
SORBIDRAFT_09g014430 [Sorghum bicolor]
Length = 577
Score = 122 bits (306), Expect = 5e-26
Identities = 68/96 (70%), Positives = 78/96 (81%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ SP + RR +G+ ++ VVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLI--SPLSQGRARRARNGRS----QRFVVRAEAKDIAFDQKSRAALQAG 54
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYG+PKVVNDGVTI
Sbjct: 55 VEKLANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTI 90
>ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Citrus sinensis]
Length = 582
Score = 122 bits (305), Expect = 7e-26
Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDAR-RKLVVRAMAKDIAFDQSSRSSLQA 113
MASANA+S+ASI SP+Q LRRR QG R+ VRA AKDIAFDQ SR+++QA
Sbjct: 1 MASANALSSASIL-CSPKQGSLRRRGNQNQGQRVNYRRFAVRASAKDIAFDQISRAAMQA 59
Query: 112 GVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
G++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 GIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 96
>gb|EPS67631.1| hypothetical protein M569_07141, partial [Genlisea aurea]
Length = 583
Score = 120 bits (302), Expect = 1e-25
Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 7/103 (6%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRR----WTHGQG---SDARRKLVVRAMAKDIAFDQSS 131
MASANA+STA + S P+Q LR R + HG G A+ + VRA AK+IAFDQ S
Sbjct: 1 MASANAISTAYVLPSPPKQAGLRNRGAKQFQHGHGFGQKQAKSRFTVRANAKEIAFDQKS 60
Query: 130 RSSLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
RS++Q+G++KLA+AVG+TLGPRGRNVVLDE+G PKVVNDGVTI
Sbjct: 61 RSAMQSGIDKLADAVGLTLGPRGRNVVLDEFGIPKVVNDGVTI 103
>ref|XP_006340213.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Solanum tuberosum]
Length = 588
Score = 119 bits (298), Expect = 4e-25
Identities = 66/102 (64%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWT---HGQ---GSDARRKLVVRAMAKDIAFDQSSR 128
MASANA+STASI S +Q L+ R GQ A+ + VV+A AK+IAFDQ SR
Sbjct: 1 MASANAISTASIIPSPSKQGGLKNRKVSQLQGQRFGNKGAKNRFVVKACAKEIAFDQKSR 60
Query: 127 SSLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
S+LQAG++KLA+AVG+TLGPRGRNVVLDEYG PKVVNDGVTI
Sbjct: 61 SALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTI 102
>ref|XP_004251160.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Solanum lycopersicum]
Length = 588
Score = 119 bits (298), Expect = 4e-25
Identities = 66/102 (64%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWT---HGQ---GSDARRKLVVRAMAKDIAFDQSSR 128
MASANA+STASI S +Q L+ R GQ A+ + VV+A AK+IAFDQ SR
Sbjct: 1 MASANAISTASIIPSPSKQGGLKNRKVSQLQGQRFGNKGAKNRFVVKACAKEIAFDQKSR 60
Query: 127 SSLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
S+LQAG++KLA+AVG+TLGPRGRNVVLDEYG PKVVNDGVTI
Sbjct: 61 SALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTI 102
>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
[Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
subunit binding-protein alpha subunit, ruba, putative
[Ricinus communis]
Length = 501
Score = 119 bits (297), Expect = 6e-25
Identities = 64/101 (63%), Positives = 80/101 (79%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGS-----DARRKLVVRAMAKDIAFDQSSRS 125
MA++NA+STASI SP+Q LRRR Q + R+ VRA AKDIAFDQ+SR+
Sbjct: 1 MATSNAISTASIL-CSPKQGNLRRRTNQQQNQRLNYGQSSRRFTVRANAKDIAFDQNSRT 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
+LQ+G++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 ALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alpha isoform 2
[Theobroma cacao]
Length = 586
Score = 118 bits (295), Expect = 9e-25
Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGS-----DARRKLVVRAMAKDIAFDQSSRS 125
MASANA+S+ASI SP+Q LRRR Q + VRA AK+IAFDQSSR+
Sbjct: 1 MASANALSSASIL-CSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEIAFDQSSRT 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
S+QAG++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 SMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>gb|EOY34440.1| RuBisCO large subunit-binding protein subunit alpha isoform 1
[Theobroma cacao]
Length = 602
Score = 118 bits (295), Expect = 9e-25
Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGS-----DARRKLVVRAMAKDIAFDQSSRS 125
MASANA+S+ASI SP+Q LRRR Q + VRA AK+IAFDQSSR+
Sbjct: 1 MASANALSSASIL-CSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEIAFDQSSRT 59
Query: 124 SLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
S+QAG++KLA+AVG+TLGPRGRNVVLDE+G+PKVVNDGVTI
Sbjct: 60 SMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTI 100
>ref|XP_004241283.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Solanum lycopersicum]
Length = 621
Score = 118 bits (295), Expect = 9e-25
Identities = 67/102 (65%), Positives = 77/102 (75%), Gaps = 6/102 (5%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLR-RRWTHGQGSD-----ARRKLVVRAMAKDIAFDQSSR 128
MASAN +STASI SS +Q L+ RR QG ++ +LVVRA AKDIAFDQ SR
Sbjct: 33 MASANGMSTASILSSSSKQVGLKGRRVNQLQGQKFNNKASKSRLVVRANAKDIAFDQKSR 92
Query: 127 SSLQAGVEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
++LQAG++KL N VGVTLGPRGRNVVLDEY PKVVNDGVTI
Sbjct: 93 AALQAGIDKLVNVVGVTLGPRGRNVVLDEYDTPKVVNDGVTI 134
>gb|AFW77798.1| chloroplast protein synthesis2 [Zea mays]
Length = 593
Score = 117 bits (293), Expect = 2e-24
Identities = 65/96 (67%), Positives = 72/96 (75%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+STAS+ R + R + + VVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTASLLRPLSQGRATRSQ-----------RFVVRANAKDIAFDQKSRAALQAG 49
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYG PKVVNDGVTI
Sbjct: 50 VEKLANAVGVTLGPRGRNVVLDEYGNPKVVNDGVTI 85
>ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Oryza brachyantha]
Length = 579
Score = 117 bits (292), Expect = 2e-24
Identities = 67/96 (69%), Positives = 75/96 (78%)
Frame = -1
Query: 289 MASANAVSTASIFRSSPRQECLRRRWTHGQGSDARRKLVVRAMAKDIAFDQSSRSSLQAG 110
MASANA+ST + S PR + R + +R LVVRA AKDIAFDQ SR++LQAG
Sbjct: 1 MASANAISTTA---SLPRYFSSQGRVRRARNGRTQR-LVVRADAKDIAFDQKSRAALQAG 56
Query: 109 VEKLANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTI 2
VEKLANAVGVTLGPRGRNVVLDEYG+PKVVNDGVTI
Sbjct: 57 VEKLANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTI 92