BLASTX nr result
ID: Zingiber24_contig00009360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00009360
(1594 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi... 306 1e-80
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi... 299 2e-78
ref|XP_002309173.2| pentatricopeptide repeat-containing family p... 295 3e-77
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr... 293 1e-76
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ... 290 9e-76
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis] 285 5e-74
ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutr... 284 7e-74
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi... 283 2e-73
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi... 281 6e-73
gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus... 280 1e-72
gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus... 280 2e-72
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar... 278 4e-72
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637... 278 4e-72
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ... 276 2e-71
gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, put... 275 5e-71
ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Caps... 267 8e-69
gb|AHB18409.1| pentatricopeptide repeat-containing protein [Goss... 265 4e-68
ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi... 258 7e-66
ref|XP_006854116.1| hypothetical protein AMTR_s00048p00149840 [A... 245 4e-62
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,... 227 1e-56
>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 491
Score = 306 bits (785), Expect = 1e-80
Identities = 160/400 (40%), Positives = 248/400 (62%), Gaps = 2/400 (0%)
Frame = -2
Query: 1482 RWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAF 1303
+W S N K + ++ A+ TLK P +S L + F +++ DP+P AY F
Sbjct: 20 KWPVSPYNTKWHKLFNQHQALQTLKHSPLNPPQ---TLLSTLIHSFNTFNCDPTPEAYNF 76
Query: 1302 VIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKF 1123
V++ LF+ L+H+ SVL+ LE E+F PE +F +I+ +G R++DA+D+F RIPKF
Sbjct: 77 VLKTLFKTSQLSHIPSVLDRLESIEKFHPPESIFANLIRFYGSANRVEDAIDVFCRIPKF 136
Query: 1122 RSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSF 943
R P+ VSLN+LL VLC S EGL MV VL + M IR E ++F ILI ALCR G + +
Sbjct: 137 RCDPSAVSLNSLLYVLCGSSEGLKMVPQVLMNSRAMGIRLEESSFRILISALCRIGSVGY 196
Query: 942 AMELLEMMQLHECDPDAGLYSIVFVSLCKQG--GSAQVIEFLEKIRNAGFDPGALEYSHV 769
A+E+++ M + D D + S+V SLC+Q G +V+ F+E+++ GF PG L+YS+V
Sbjct: 197 AIEIMKCMISNGYDLDVKICSLVLSSLCEQKGVGGLEVVGFVEEMKKVGFCPGMLDYSNV 256
Query: 768 ISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGL 589
I L+ +GK DA L M++EG +PDI+ Y +L I DYK AD++FDE+L++GL
Sbjct: 257 IRCLVKQGKGLDALRVLCKMKVEGMKPDIVCYTMVLYGVIANGDYKNADKVFDELLVLGL 316
Query: 588 VPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKE 409
VP TYN YI+GLC Q N+E +M+ CM++ GC+P++ T++ ++ K E+++A+E
Sbjct: 317 VPDVYTYNVYINGLCNQNNVEAGIKMITCMDELGCRPNLITYNLLLKALCKNEELSRARE 376
Query: 408 LMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEM 289
L+ E+ ++ + ++ GL + V+EA + EM
Sbjct: 377 LVSEMTLNGVGVNLQTHIIMLDGLFCKGDVDEACIFMEEM 416
>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 299 bits (766), Expect = 2e-78
Identities = 165/412 (40%), Positives = 248/412 (60%), Gaps = 7/412 (1%)
Frame = -2
Query: 1503 NICMRSCRWFASSRNGKRQRSLSEQLAMDTLKKKIAEE---PNDGTNH--ISILTNCFRS 1339
N + +W S + + AM TLK IA + P +N +SIL + FR
Sbjct: 11 NFLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRI 70
Query: 1338 YDTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQ 1159
Y++DP+P+AY FVI L R R H+ +L LEK E+F+ PE +F +I+ +G +
Sbjct: 71 YNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNANMFE 130
Query: 1158 DAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSIL 979
DAVDLFFRIP FR P+V SLNALL VLC+ +EGL MV +L K+ MNIR E ++F IL
Sbjct: 131 DAVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQILLKSQAMNIRLEESSFRIL 190
Query: 978 IEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNA 805
+ ALCR K ++A+ +L M DA + SI+ SLC+Q G + +V+ F+E++R
Sbjct: 191 VAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIILSSLCEQKGLSGDEVLRFMEEMRKL 250
Query: 804 GFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKA 625
GF PG ++ ++VI L+ EG DA M+ +G +PD + Y IL+ DY+KA
Sbjct: 251 GFYPGRVDCNNVIRFLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKA 310
Query: 624 DELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDG 445
D+LFDEML++G+VP YN YI+ LCKQ N+E+ RML M + GCKPD T++ +++G
Sbjct: 311 DDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVTYNMLLEG 370
Query: 444 YAKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEM 289
+K ++ +EL +E+ + + ++ ++ GLV + +++E+ LL EM
Sbjct: 371 MSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGLVGKGEIDESCSLLEEM 422
>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335936|gb|EEE92696.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 490
Score = 295 bits (756), Expect = 3e-77
Identities = 158/403 (39%), Positives = 247/403 (61%), Gaps = 6/403 (1%)
Frame = -2
Query: 1482 RWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNH----ISILTNCFRSYDTDPSPS 1315
+W S + R ++Q AM +LK+ + P + + +S L + F YD +P+P
Sbjct: 19 KWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKPHLLSSLIHSFSIYDVEPAPK 78
Query: 1314 AYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFR 1135
A+ F+ + L + H+ SVL+HLEK E F+ PE F +I+ +G+T + +A++LF+R
Sbjct: 79 AFDFIFKTLVKTSQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYGRTNKTHEAIELFYR 138
Query: 1134 IPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNG 955
IPKFR P+V SLN L++VLC + +GL +V ++L K+ MNIR E +TF +LI ALCR
Sbjct: 139 IPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEILLKSQVMNIRVEESTFQVLITALCRIR 198
Query: 954 KLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALE 781
K+ FA+E+L M +A +YS++ LC+Q + +VI FLE++R GF PG ++
Sbjct: 199 KVGFAIEMLNCMVNDGFIVNAEIYSLLLSCLCEQKDATKFEVIGFLEQLRKLGFFPGMVD 258
Query: 780 YSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEML 601
YS+VI L+ + DA L M+ + +PDI Y +L I DY KADELFDE+L
Sbjct: 259 YSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYTMVLHGVIEDKDYLKADELFDELL 318
Query: 600 LIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMA 421
+ GLVP + TYN YI+GLCKQ N++ +M+ ME+ GCKP++ T++ ++ K GE++
Sbjct: 319 VFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCKVGELS 378
Query: 420 KAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLME 292
KA EL++E+ K ++ ++ ++ GL S ++ EA L E
Sbjct: 379 KAGELVREMGLKGIGLNMQTYRIMIDGLASNGKIVEACGLFEE 421
>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
gi|557531581|gb|ESR42764.1| hypothetical protein
CICLE_v10013613mg [Citrus clementina]
Length = 506
Score = 293 bits (751), Expect = 1e-76
Identities = 163/424 (38%), Positives = 255/424 (60%), Gaps = 11/424 (2%)
Frame = -2
Query: 1530 MIMSSSCAR-NICMRSCR-WFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHI--- 1366
M+ SS+ R N+ +R R W S K ++L +Q A +K+ + P I
Sbjct: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
Query: 1365 ----SILTNCFRSYDTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFV 1198
S L + F Y+ +P P AY FVI+ L N +SSVL+H+EK E F+ PE +F+
Sbjct: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
Query: 1197 TVIQNFGQTGRLQDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPE 1018
+I+ + R QD+V+LF++IPKFR P+V SLNALL+VLC +KE + MV +L K+
Sbjct: 121 DLIKTYADAHRFQDSVNLFYKIPKFRCVPSVYSLNALLSVLCRNKEWVKMVPQILLKSQL 180
Query: 1017 MNIRFEATTFSILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQG--GS 844
MNIR E ++F ILI LCR ++ FA+E+L M D S + S+C+Q S
Sbjct: 181 MNIRIEESSFRILISTLCRINRVGFAIEILNCMINDGFCVDGKTCSWILSSVCEQRDLSS 240
Query: 843 AQVIEFLEKIRNAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRI 664
+++ F+++++ GF G ++Y++VI L+ + K DA L M+ +G +PDI+ Y +
Sbjct: 241 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 300
Query: 663 LDAFILANDYKKADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGC 484
L+ I+ DY KA+ELFDE+L++GLVP TYN YI+GLCKQ N+E +M+ CME+ G
Sbjct: 301 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 360
Query: 483 KPDVETFSAVIDGYAKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQ 304
KPDV T++ ++ K E+ + +EL++E++ K +++ ++ ++ GL S+ + EA
Sbjct: 361 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 420
Query: 303 LLME 292
LL E
Sbjct: 421 LLEE 424
Score = 73.2 bits (178), Expect = 3e-10
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Frame = -2
Query: 1089 LLAVLCESKEGLA--MVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMELLEMMQ 916
+L+ +CE ++ + ++G V + ++ F ++ +I +L + K+ A+ +L M+
Sbjct: 228 ILSSVCEQRDLSSDELLGFV-QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 286
Query: 915 LHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGALEYSHVISLLIDEGKAD 736
PD Y++V + Q + E +++ G P Y+ I+ L + +
Sbjct: 287 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 346
Query: 735 DAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTTYNTYI 556
+ M G +PD++ YN +L A + + EL EM G+V TY+ I
Sbjct: 347 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 406
Query: 555 HGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEVREK 385
GL +G++ +A +L G F I G + G + KA EL++++ +K
Sbjct: 407 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 463
>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 653
Score = 290 bits (743), Expect = 9e-76
Identities = 159/420 (37%), Positives = 252/420 (60%), Gaps = 5/420 (1%)
Frame = -2
Query: 1518 SSCARNICMRSCRWFASSRNGKRQRSLSEQLAMDTL-KKKIAEEPNDGTNHISILTNCFR 1342
S A + +W S + EQ A+ L K + N+ +S L + F+
Sbjct: 7 SKTANKYLRKFRKWPHSPYKTSWHHNFGEQQAIQILINAKTQTQNNNDPFLLSTLIHSFK 66
Query: 1341 SYDTDPSPSAYAFVIRHL--FRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTG 1168
+Y TDPSP AY F+I+ + L + +L HLE +E+F+ PE +F+ +I+ +G
Sbjct: 67 AYHTDPSPKAYFFLIKTITNINTSHLHEIPHILNHLEHNEKFETPEFIFMYLIRFYGFND 126
Query: 1167 RLQDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTF 988
R+QDAVDLFFRIP+FR TPTV SLN LL++LC +E L MV D+L K+ +M IR E ++F
Sbjct: 127 RVQDAVDLFFRIPRFRCTPTVCSLNLLLSLLCGKRECLRMVPDILLKSRDMKIRLEESSF 186
Query: 987 SILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGG--SAQVIEFLEKI 814
+LI+ALCR ++ +A++++ M D + S++ SLC+Q S + + +
Sbjct: 187 WVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDLTSVEALVVWGNM 246
Query: 813 RNAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDY 634
R GF PG ++ +++I L+ EGK DA L ++ +G +PDI+ Y +L + DY
Sbjct: 247 RKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDY 306
Query: 633 KKADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAV 454
K DELFDE+L++GLVP TYN YI+GLCKQ N ++A ++++ MEK GCKP+V T++ +
Sbjct: 307 VKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTL 366
Query: 453 IDGYAKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
+ +G++ KAK +M+E+R K ++ +++ ++ GLV + ++ EA LL EM F
Sbjct: 367 LGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCF 426
Score = 80.5 bits (197), Expect = 2e-12
Identities = 54/199 (27%), Positives = 95/199 (47%)
Frame = -2
Query: 981 LIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAG 802
+I L + GK A+E+L ++ PD Y+IV + K+G ++ E ++I G
Sbjct: 261 MIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLG 320
Query: 801 FDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKAD 622
P Y+ I+ L + D+A +V M G +P+++ YN +L A ++ D KA
Sbjct: 321 LVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAK 380
Query: 621 ELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGY 442
+ EM L G+ TY + GL +G + +A +L M + P TF +++
Sbjct: 381 RVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVHQM 440
Query: 441 AKTGEMAKAKELMQEVREK 385
+ G ++ A LM ++ K
Sbjct: 441 CQKGLISDALVLMNKIVAK 459
Score = 72.4 bits (176), Expect = 5e-10
Identities = 50/239 (20%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Frame = -2
Query: 1158 DAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSIL 979
+A+ ++ + K P V+ ++ L + +G+ + ++L++ E I+ + ++I+
Sbjct: 238 EALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDAL-EILNQLKEDGIKPDIVCYTIV 296
Query: 978 IEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGF 799
+ + + G EL + + + PD Y++ LCKQ + ++ + + G
Sbjct: 297 LSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGC 356
Query: 798 DPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADE 619
P + Y+ ++ L G A + MR++G ++ Y +LD + + +A
Sbjct: 357 KPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACV 416
Query: 618 LFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCK---PDVETFSAVI 451
L +EML P S+T+++ +H +C++G + A L+ M K K P + + A++
Sbjct: 417 LLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDA---LVLMNKIVAKSFDPGAKVWEALL 472
>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
Length = 494
Score = 285 bits (728), Expect = 5e-74
Identities = 159/420 (37%), Positives = 246/420 (58%), Gaps = 6/420 (1%)
Frame = -2
Query: 1530 MIMSSSCARNICMRSCRWFA-SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILT 1354
M++ N +R R F S K + ++ A+ TLK+ E PN +S+L
Sbjct: 1 MVIRPFSLTNKFLRKHREFPISPYKTKWHETFNQTQALQTLKRHQNENPN---RLLSLLL 57
Query: 1353 NCFRSYDTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQ 1174
N F SYD +P+P AY FV++ L + H+ SVL+ +E E+F+ PE F +I +G
Sbjct: 58 NSFNSYDCNPTPEAYHFVLKTLIKTSQFDHIHSVLDRIEFVEKFETPEYFFAQIIGFYGF 117
Query: 1173 TGRLQDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEAT 994
R++DA+D+F+RIPKFR P+ SLN+LL VLC EGL V +VL K+ +MNIR E
Sbjct: 118 LDRIEDAIDIFWRIPKFRCVPSSYSLNSLLYVLCRRNEGLRFVPEVLIKSRDMNIRLEEA 177
Query: 993 TFSILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQG-----GSAQVIE 829
+F ILI ALC+ GK+ +A+E+L+ M D DA + S++ LC + V+E
Sbjct: 178 SFRILITALCKIGKVGYAIEILDCMISDGYDIDARICSLILSFLCGKNKELDLAGFDVLE 237
Query: 828 FLEKIRNAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFI 649
L+K+ GF P +YS VI +L+ E + +A L M+ +G +PD++ Y +L +
Sbjct: 238 LLQKMEKMGFCPRMGDYSKVIRILVREKRGLEALDILGQMKADGMKPDVVCYTMVLHGIV 297
Query: 648 LANDYKKADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVE 469
+Y KADE+FDEML++GLVP TYN YI+GLCKQ +++ A ++ ME+ GCKP++
Sbjct: 298 AEGEYSKADEMFDEMLVLGLVPDVYTYNAYINGLCKQNDVDGALDTILRMEELGCKPNLI 357
Query: 468 TFSAVIDGYAKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEM 289
T++ ++ K GE +AKEL+ E+ K ++ ++ L+ + ++ EA L+ EM
Sbjct: 358 TYNLILRALCKNGEFGRAKELVAEMSLKGFEDYLQTYIIMLDVLLGKGEIVEACGLMEEM 417
Score = 72.0 bits (175), Expect = 7e-10
Identities = 52/236 (22%), Positives = 104/236 (44%)
Frame = -2
Query: 1158 DAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSIL 979
D ++L ++ K P + + ++ +L K GL + D+L + ++ + ++++
Sbjct: 234 DVLELLQKMEKMGFCPRMGDYSKVIRILVREKRGLEAL-DILGQMKADGMKPDVVCYTMV 292
Query: 978 IEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGF 799
+ + G+ S A E+ + M + PD Y+ LCKQ ++ + ++ G
Sbjct: 293 LHGIVAEGEYSKADEMFDEMLVLGLVPDVYTYNAYINGLCKQNDVDGALDTILRMEELGC 352
Query: 798 DPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADE 619
P + Y+ ++ L G+ A + M ++G + Y +LD + + +A
Sbjct: 353 KPNLITYNLILRALCKNGEFGRAKELVAEMSLKGFEDYLQTYIIMLDVLLGKGEIVEACG 412
Query: 618 LFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
L +EML L + Y+ I GLC++G KA ML M P + A++
Sbjct: 413 LMEEMLDKLLCRRCSMYDEIIFGLCRRGLDCKASEMLGKMVGKNVAPGARAWDALL 468
>ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutrema salsugineum]
gi|557112223|gb|ESQ52507.1| hypothetical protein
EUTSA_v10017948mg [Eutrema salsugineum]
Length = 456
Score = 284 bits (727), Expect = 7e-74
Identities = 155/397 (39%), Positives = 243/397 (61%), Gaps = 4/397 (1%)
Frame = -2
Query: 1470 SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNH--ISILTNCFRSYDTDPSPSAYAFVI 1297
SS K +L ++ AM+ L+ + + N + L + FR ++ +P+P AY FVI
Sbjct: 23 SSFKTKWNENLKQKYAMEELRSGLIADSGSNENDGVLRTLISSFRLHNCEPTPQAYKFVI 82
Query: 1296 RHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRS 1117
+ L + L +++SVL H+E E+FD PE +F VI +G +GR+++A+D+FF+IP FR
Sbjct: 83 KTLAKTSQLENIASVLNHIEISEKFDTPESIFRDVIFAYGFSGRIEEAIDVFFKIPNFRC 142
Query: 1116 TPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAM 937
P+ +LNALL+VL ++GL MV +VL KA ++ +R E +T ILI+ALCR G++ A
Sbjct: 143 VPSAYTLNALLSVLVRKRQGLKMVPEVLLKASKLGVRLEESTLGILIDALCRIGEVDCAT 202
Query: 936 ELLEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALEYSHVIS 763
+L++ M D LYS++ S+CK S+ VI +LE +R F P +Y+ V+
Sbjct: 203 DLVKDMSDDCYIVDPRLYSLLLSSVCKHKDSSCFDVIGYLEGLRKTRFSPDLRDYTAVMR 262
Query: 762 LLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVP 583
L++ G+ + S L M+ + PDI+ Y IL I DYKKAD+LFDE+LL+GLVP
Sbjct: 263 FLVEGGRGKEVVSVLNQMKCDRIEPDIVCYTIILQGVIADEDYKKADKLFDELLLLGLVP 322
Query: 582 CSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELM 403
TYN YI+GLCKQ ++E +M+ CMEK G +P+V T++ +I K G+M++AK +
Sbjct: 323 DVYTYNVYINGLCKQSDIECGIKMMSCMEKLGSEPNVVTYNILIKALVKAGDMSRAKIIW 382
Query: 402 QEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLME 292
+E+ +++S+ +V+ + D+V AH LL E
Sbjct: 383 EEMETNGVDRNSHSYDIMVNASIEADEVVCAHGLLEE 419
>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Glycine max]
Length = 499
Score = 283 bits (723), Expect = 2e-73
Identities = 154/411 (37%), Positives = 245/411 (59%), Gaps = 13/411 (3%)
Frame = -2
Query: 1482 RWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNH-----------ISILTNCFRSY 1336
+W S + E+ AM LK+ E D + H +S L + F++Y
Sbjct: 19 KWPHSPYKTSWHHNFGEEQAMKNLKQATLEM--DSSQHPQRPNLPCPFLLSTLLDSFKAY 76
Query: 1335 DTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQD 1156
DP+P AY FV++ L L + VL HLE E+F+ PE + V +I+ +G + R+QD
Sbjct: 77 SIDPTPKAYFFVLKTLTSTSQLQDIPPVLYHLEHLEKFETPESILVYLIRFYGLSDRVQD 136
Query: 1155 AVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILI 976
AVDLFFRIP+FR TPTV SLN +L++LC ++ L MV ++L K+ MNIR E +TF +LI
Sbjct: 137 AVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEILLKSQHMNIRVEESTFRVLI 196
Query: 975 EALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGG--SAQVIEFLEKIRNAG 802
ALCR ++ +A+++L M D + S+V +LC+Q SA+ + +R G
Sbjct: 197 RALCRIKRVGYAIKMLNFMVEDGYGLDEKICSLVISALCEQKDLTSAEALVVWRDMRKLG 256
Query: 801 FDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKAD 622
F PG ++Y+++I L+ EG+ DA L + +G + D++ Y +L + +Y D
Sbjct: 257 FCPGVMDYTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTMVLSGIVAEGEYVMLD 316
Query: 621 ELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGY 442
ELFDEML+IGL+P + TYN YI+GLCKQ N+ +A +++ ME+ GCKP+V T++ ++
Sbjct: 317 ELFDEMLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGAL 376
Query: 441 AKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEM 289
+ G+ KA+ELM+E+ K ++ +++ ++ GLV + ++ E+ LL EM
Sbjct: 377 SVAGDFVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGESCLLLEEM 427
Score = 72.4 bits (176), Expect = 5e-10
Identities = 58/291 (19%), Positives = 130/291 (44%), Gaps = 2/291 (0%)
Frame = -2
Query: 1317 SAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQ--DAVDL 1144
S + +IR L R + + + +L + +D + + E + VI + L +A+ +
Sbjct: 190 STFRVLIRALCRIKRVGYAIKMLNFMVEDG-YGLDEKICSLVISALCEQKDLTSAEALVV 248
Query: 1143 FFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALC 964
+ + K P V+ ++ L + G+ + D+L++ + I+ + ++++++ +
Sbjct: 249 WRDMRKLGFCPGVMDYTNMIRFLVKEGRGMDAL-DILNQQKQDGIKLDVVSYTMVLSGIV 307
Query: 963 RNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGAL 784
G+ EL + M + PDA Y++ LCKQ A+ ++ + + G P +
Sbjct: 308 AEGEYVMLDELFDEMLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELGCKPNVV 367
Query: 783 EYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEM 604
Y+ ++ L G A + M +G ++ Y +LD + + ++ L +EM
Sbjct: 368 TYNTLLGALSVAGDFVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGESCLLLEEM 427
Query: 603 LLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
L L P S+T++ I +C++ +A + + P T+ A++
Sbjct: 428 LEKCLFPRSSTFDNIIFQMCQKDLFTEAMELTKKVVAKSFLPGASTWEALL 478
>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 281 bits (719), Expect = 6e-73
Identities = 159/415 (38%), Positives = 237/415 (57%), Gaps = 2/415 (0%)
Frame = -2
Query: 1509 ARNICMRSCRWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDT 1330
+ N + +W SS K ++ + A+ LK+ A P+ +S L F +Y
Sbjct: 11 SNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQ--AANPDQPHLLLSALVTSFTAYSC 68
Query: 1329 DPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAV 1150
P+P+AY FV++ L R H+ VL L+ E F PE +FV +I+ +G+ R+QDAV
Sbjct: 69 HPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAV 128
Query: 1149 DLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEA 970
LF RIP FR P+ +SLN+LL+ L + +GL ++ D++ + M IR E +TF ILI A
Sbjct: 129 TLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITA 188
Query: 969 LCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQ--VIEFLEKIRNAGFD 796
LC+ K+ AMEL M + + S++ SLC+Q S+ V+ FLE++R GF
Sbjct: 189 LCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFC 248
Query: 795 PGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADEL 616
P ++YS+VI + G DA L M+ +G +PDI+ Y +L+ I DYK ADEL
Sbjct: 249 PAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADEL 308
Query: 615 FDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAK 436
FDE+LL GLVP TYN YIHGLCKQG+ +M+ ME GC+P+V T++ ++ K
Sbjct: 309 FDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCK 368
Query: 435 TGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSFP 271
TGE+ +A++L +++ K + +F ++ GL +V EA LL EM FP
Sbjct: 369 TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFP 423
Score = 71.6 bits (174), Expect = 9e-10
Identities = 46/222 (20%), Positives = 99/222 (44%)
Frame = -2
Query: 1041 DVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSL 862
D+L+K + + +++++ + +G A EL + + L PD Y++ L
Sbjct: 272 DLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGL 331
Query: 861 CKQGGSAQVIEFLEKIRNAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDI 682
CKQG S ++ + + G P + Y+ ++ L G+ D+A M+++G ++
Sbjct: 332 CKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENL 391
Query: 681 MIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLIC 502
+ ++D + +A L +EML P +T++ + LCK+ + KA +L
Sbjct: 392 RTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLAL 451
Query: 501 MEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEVREKMPI 376
M P + + ++ + E+ K L +++ + I
Sbjct: 452 MVGKNFSPGPKAWEILL--LSSESELTSVKSLETTLKDLVGI 491
>gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
Length = 514
Score = 280 bits (716), Expect = 1e-72
Identities = 155/411 (37%), Positives = 243/411 (59%), Gaps = 8/411 (1%)
Frame = -2
Query: 1482 RWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHI------SILTNCFRSYDTDPS 1321
+W S + EQ AM LK+ E T ++ S L + F++Y DP+
Sbjct: 19 KWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHPFLLSTLLDAFKAYSCDPT 78
Query: 1320 PSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLF 1141
P AY FVI+ L L + VL+HLE+ E F+ PE + V +I+ +G + R+QDAVDLF
Sbjct: 79 PKAYYFVIKTLTSTSHLQDIPPVLDHLEQLETFETPEFILVYLIRFYGLSDRVQDAVDLF 138
Query: 1140 FRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCR 961
RIP+FR TPTV SLN +L++LC +E L MV ++L K+ MNIR E +TF +LIEALCR
Sbjct: 139 LRIPRFRCTPTVWSLNLVLSLLCRKRECLKMVPEILLKSQHMNIRVEESTFQVLIEALCR 198
Query: 960 NGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGG--SAQVIEFLEKIRNAGFDPGA 787
++ +A+++L M D + S++ SLC+Q S + + +R GF PG
Sbjct: 199 IKRVGYAIKMLNYMIEGGYGLDETICSLIISSLCEQEDMTSVEALVIWRDMRKLGFCPGV 258
Query: 786 LEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDE 607
++Y+++I L+ EGK DA L + +G +PD++ Y +L + +Y K +ELFDE
Sbjct: 259 MDYTNMIRFLVKEGKGTDALDILNQQKKDGIKPDVVCYTMVLSGIVAEGEYVKLEELFDE 318
Query: 606 MLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGE 427
+L+ GLVP TYN YI+GLCKQ N+++A +++ ME+ C+P+V T + ++ G+
Sbjct: 319 ILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECRPNVVTCNTLLGALCVAGD 378
Query: 426 MAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
+ KA+ +M+E+ K ++ +S+ ++ GLV + ++ EA LL EM F
Sbjct: 379 LRKARGVMKEMGWKGVGLNLHSYRIMLDGLVGKGEIGEACFLLEEMLEKCF 429
>gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
Length = 513
Score = 280 bits (715), Expect = 2e-72
Identities = 156/411 (37%), Positives = 242/411 (58%), Gaps = 8/411 (1%)
Frame = -2
Query: 1482 RWFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHI------SILTNCFRSYDTDPS 1321
+W S + EQ AM LK+ E T ++ S L + F+SY DP+
Sbjct: 19 KWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHPFLLSTLIDSFKSYSCDPT 78
Query: 1320 PSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLF 1141
P AY F+I+ L + VL+HLE E+F+ PE V +I+ +G + ++QDAVDLF
Sbjct: 79 PKAYYFLIKTLTCTSQFQDIPPVLDHLEHLEKFETPEFNLVYLIRFYGLSDKVQDAVDLF 138
Query: 1140 FRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCR 961
RIP+FR TPTV SLN +L++LC +E L MV ++L K+ MNIR E +TF +LI+ALCR
Sbjct: 139 LRIPRFRCTPTVCSLNLVLSLLCRKRECLKMVPEILLKSQHMNIRVEESTFQVLIKALCR 198
Query: 960 NGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGG--SAQVIEFLEKIRNAGFDPGA 787
++ +A+++L M D + S++ SLC+Q S + + +R GF PG
Sbjct: 199 IKRVGYAIKMLNYMIEGGYGLDETMCSLIISSLCEQEDMTSVEALVIWRDMRKLGFCPGI 258
Query: 786 LEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDE 607
++Y+++I L+ EGK DA L + +G +PD++ Y +L I +Y K +ELFDE
Sbjct: 259 MDYTNMIRFLVKEGKGMDALDILNQQKKDGIKPDVVCYTMVLSGIIAEGEYVKLEELFDE 318
Query: 606 MLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGE 427
+L+ GLVP TYN YI+GLCKQ N+++A +++ ME+ CKP+V T + ++ G+
Sbjct: 319 ILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECKPNVVTCNILLGALCVAGD 378
Query: 426 MAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
+ KA+ +M+E+ K +D +S+ ++ GLV + ++ EA LL EM SF
Sbjct: 379 LRKARGVMKEMGWKGVRLDLHSYRIMLDGLVGKGEIGEACFLLEEMLEKSF 429
Score = 63.2 bits (152), Expect = 3e-07
Identities = 53/298 (17%), Positives = 131/298 (43%), Gaps = 2/298 (0%)
Frame = -2
Query: 1317 SAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQ--DAVDL 1144
S + +I+ L R + + + +L ++ + + + E M +I + + + +A+ +
Sbjct: 187 STFQVLIKALCRIKRVGYAIKMLNYMIEGG-YGLDETMCSLIISSLCEQEDMTSVEALVI 245
Query: 1143 FFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALC 964
+ + K P ++ ++ L + +G+ + D+L++ + I+ + +++++ +
Sbjct: 246 WRDMRKLGFCPGIMDYTNMIRFLVKEGKGMDAL-DILNQQKKDGIKPDVVCYTMVLSGII 304
Query: 963 RNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGAL 784
G+ EL + + + PD Y++ LCKQ + ++ + + P +
Sbjct: 305 AEGEYVKLEELFDEILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECKPNVV 364
Query: 783 EYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEM 604
+ ++ L G A + M +G R D+ Y +LD + + +A L +EM
Sbjct: 365 TCNILLGALCVAGDLRKARGVMKEMGWKGVRLDLHSYRIMLDGLVGKGEIGEACFLLEEM 424
Query: 603 LLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTG 430
L P S+T++ I +C++G + +A + + P + A++ +K G
Sbjct: 425 LEKSFFPRSSTFDHIIFQMCQKGLIVEAIELTKKIVAKSFVPGARAWEALLKSGSKLG 482
>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g38420, mitochondrial; Flags: Precursor
gi|3395430|gb|AAC28762.1| hypothetical protein
[Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 453
Score = 278 bits (712), Expect = 4e-72
Identities = 150/400 (37%), Positives = 241/400 (60%), Gaps = 2/400 (0%)
Frame = -2
Query: 1470 SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAFVIRH 1291
SS K +L ++ AM+ L+ + + ++ + + L + F+ ++ +P+P AY FVI+
Sbjct: 23 SSFKTKWNENLKQKYAMEELRSNLLTD-SENASVMRTLLSSFQLHNCEPTPQAYRFVIKT 81
Query: 1290 LFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTP 1111
L ++ L ++SSVL HLE E+FD PE +F VI +G +GR+++A+++FF+IP FR P
Sbjct: 82 LAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVP 141
Query: 1110 TVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMEL 931
+ +LNALL VL ++ L +V ++L KA M +R E +TF ILI+ALCR G++ A EL
Sbjct: 142 SAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATEL 201
Query: 930 LEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALEYSHVISLL 757
+ M D LYS + S+CK S+ VI +LE +R F PG +Y+ V+ L
Sbjct: 202 VRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFL 261
Query: 756 IDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCS 577
++ G+ + S L M+ + PD++ Y +L I DY KAD+LFDE+LL+GL P
Sbjct: 262 VEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDV 321
Query: 576 TTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQE 397
TYN YI+GLCKQ ++E A +M+ M K G +P+V T++ +I K G++++AK L +E
Sbjct: 322 YTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKE 381
Query: 396 VREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMS 277
+ ++++F ++ + D+V AH LL E M+
Sbjct: 382 METNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
At2g38420 [Arabidopsis thaliana]
Length = 444
Score = 278 bits (712), Expect = 4e-72
Identities = 150/400 (37%), Positives = 241/400 (60%), Gaps = 2/400 (0%)
Frame = -2
Query: 1470 SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAFVIRH 1291
SS K +L ++ AM+ L+ + + ++ + + L + F+ ++ +P+P AY FVI+
Sbjct: 14 SSFKTKWNENLKQKYAMEELRSNLLTD-SENASVMRTLLSSFQLHNCEPTPQAYRFVIKT 72
Query: 1290 LFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTP 1111
L ++ L ++SSVL HLE E+FD PE +F VI +G +GR+++A+++FF+IP FR P
Sbjct: 73 LAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVP 132
Query: 1110 TVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMEL 931
+ +LNALL VL ++ L +V ++L KA M +R E +TF ILI+ALCR G++ A EL
Sbjct: 133 SAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATEL 192
Query: 930 LEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALEYSHVISLL 757
+ M D LYS + S+CK S+ VI +LE +R F PG +Y+ V+ L
Sbjct: 193 VRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFL 252
Query: 756 IDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCS 577
++ G+ + S L M+ + PD++ Y +L I DY KAD+LFDE+LL+GL P
Sbjct: 253 VEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDV 312
Query: 576 TTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQE 397
TYN YI+GLCKQ ++E A +M+ M K G +P+V T++ +I K G++++AK L +E
Sbjct: 313 YTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKE 372
Query: 396 VREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMS 277
+ ++++F ++ + D+V AH LL E M+
Sbjct: 373 METNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 412
>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325583|gb|EFH56003.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 444
Score = 276 bits (705), Expect = 2e-71
Identities = 151/400 (37%), Positives = 240/400 (60%), Gaps = 2/400 (0%)
Frame = -2
Query: 1470 SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAFVIRH 1291
SS K +L ++ AM+ L+ + + +G+ + L + F+ ++ +P+P AY FVI
Sbjct: 14 SSFKTKWNENLKQKYAMEELRSNLLADSENGSV-MRTLVSSFQLHNCEPTPQAYRFVIET 72
Query: 1290 LFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTP 1111
L + L +++SVL+HLE E+FD PE +F VI +G +GR+++A+D+FF+IP FR P
Sbjct: 73 LAKTSQLENIASVLDHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIDVFFKIPNFRCVP 132
Query: 1110 TVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMEL 931
+ +LNALL VL ++ L +V ++L KA M +R E +TF ILI ALCR G++ A EL
Sbjct: 133 SAYTLNALLLVLVRKRQSLELVPEILVKASRMGVRLEESTFGILINALCRIGEVDCATEL 192
Query: 930 LEMMQLHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALEYSHVISLL 757
+ M D LYS++ S+CK S+ VI +LE +R F PG +Y+ V+ L
Sbjct: 193 VRYMSEDSVIVDPRLYSLLLSSVCKHKDSSCFDVIGYLEDLRKTRFLPGLRDYTVVMRFL 252
Query: 756 IDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCS 577
++ G+ + S L M+ + PD++ Y +L I DY KAD+LFDE+LL+GL P
Sbjct: 253 VEGGRGKEVVSVLNQMKCDRIDPDVVCYTIVLLGVIADEDYPKADKLFDELLLLGLDPDV 312
Query: 576 TTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQE 397
TYN YI+GLCKQ ++E A +M+ M K G +P+V T++ VI G K G++++AK L +E
Sbjct: 313 YTYNVYINGLCKQNDIEGAIKMMSSMNKLGSEPNVVTYNIVIKGLVKAGDLSRAKTLWKE 372
Query: 396 VREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMS 277
+ +++++ ++ + D+V A LL E M+
Sbjct: 373 MEMNGVNRNSHTYDIMISAYIEVDEVVCAQGLLEEAFNMN 412
>gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 542
Score = 275 bits (702), Expect = 5e-71
Identities = 155/416 (37%), Positives = 245/416 (58%), Gaps = 5/416 (1%)
Frame = -2
Query: 1506 RNICMRSCR-WFASSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHI--SILTNCFRSY 1336
RN+ +R R W + K ++ +++ AM + K+ +A ++ I S L F Y
Sbjct: 53 RNLFLRKHRRWPHFAYKTKWNQTFTQKQAMLSFKQLVAVAQDNLPPPILLSTLVRSFSLY 112
Query: 1335 DTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQD 1156
+ P+P AY F+I+ L +N H+ SVL HLE E+F PE +F +I +G R+QD
Sbjct: 113 NVHPTPQAYHFLIKTLIQNLHFNHIPSVLHHLEHVEKFQTPEYIFADLITTYGIANRIQD 172
Query: 1155 AVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILI 976
AVD+F+RIPKFR P+ SLN+LLA+LC ++ L +V VL K+ MNIR E +T IL+
Sbjct: 173 AVDIFYRIPKFRCVPSAYSLNSLLALLCRNQYSLKLVPQVLLKSLLMNIRVEESTLRILV 232
Query: 975 EALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQG--GSAQVIEFLEKIRNAG 802
ALCR K+S+A+++L+ M + + S + S+C + V+ ++ G
Sbjct: 233 SALCRMNKVSYAIDILQRMIDEGLGVNDKVCSFILSSICAKADLDGEDVMGLWRELGKLG 292
Query: 801 FDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKAD 622
F P +Y+ +I L+ +G+ DA FL M+ G +P I+ Y L+ I DY AD
Sbjct: 293 FCPAMSDYNCLIRFLVKKGRGLDALDFLNQMKSVGIKPGIVSYTMALNGVIAEGDYMLAD 352
Query: 621 ELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGY 442
ELFDE+L++GLVP TYN YI LCKQ +E+ +M+ CME+ CKP+V T++ +++
Sbjct: 353 ELFDELLMLGLVPDVYTYNAYIDALCKQNKVEEGIKMVACMEELRCKPNVLTYNMLLEAI 412
Query: 441 AKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
K GE+++A EL++E++ K ++ S+ ++ GLVS+ ++ EAH L+ E+ F
Sbjct: 413 CKVGEISRAMELVKEMKYKGIEMNLVSYTVIIDGLVSKGEILEAHGLVEEVLHKCF 468
Score = 65.9 bits (159), Expect = 5e-08
Identities = 49/237 (20%), Positives = 103/237 (43%)
Frame = -2
Query: 1161 QDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSI 982
+D + L+ + K P + N L+ L + GL + D L++ + I+ ++++
Sbjct: 279 EDVMGLWRELGKLGFCPAMSDYNCLIRFLVKKGRGLDAL-DFLNQMKSVGIKPGIVSYTM 337
Query: 981 LIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAG 802
+ + G A EL + + + PD Y+ +LCKQ + I+ + +
Sbjct: 338 ALNGVIAEGDYMLADELFDELLMLGLVPDVYTYNAYIDALCKQNKVEEGIKMVACMEELR 397
Query: 801 FDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKAD 622
P L Y+ ++ + G+ A + M+ +G +++ Y I+D + + +A
Sbjct: 398 CKPNVLTYNMLLEAICKVGEISRAMELVKEMKYKGIEMNLVSYTVIIDGLVSKGEILEAH 457
Query: 621 ELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
L +E+L S ++ I GLC++G + +A +L M P + A++
Sbjct: 458 GLVEEVLHKCFCHQSLAFDEVICGLCQRGLVCEALELLRKMVAKNVSPGARGWEALL 514
>ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Capsella rubella]
gi|482562854|gb|EOA27044.1| hypothetical protein
CARUB_v10023139mg [Capsella rubella]
Length = 470
Score = 267 bits (683), Expect = 8e-69
Identities = 145/395 (36%), Positives = 230/395 (58%), Gaps = 2/395 (0%)
Frame = -2
Query: 1455 KRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAFVIRHLFRNR 1276
K +L ++ AM+ L+ + DG I L + FR ++ +P+P AY FVI+ L +
Sbjct: 45 KWNENLKQKYAMEELRSSPVADSEDG-GVIRTLVSSFRLHNCEPTPQAYRFVIKTLAKTS 103
Query: 1275 MLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTPTVVSL 1096
L +++SVL HLE E+FD PE +F VI +G GR+ +A+D+FF+IP FR P+ +L
Sbjct: 104 QLENIASVLSHLEVSEKFDTPESIFRDVIAAYGFAGRIGEAIDVFFKIPNFRCVPSAYTL 163
Query: 1095 NALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMELLEMMQ 916
NALL VL +E L +V ++L KA M +R E +TF ILI+ALC+ G++ A EL+ M
Sbjct: 164 NALLLVLVRKRESLELVPEILVKASRMGVRLEESTFGILIDALCKIGEVDCATELVRYMS 223
Query: 915 LHECDPDAGLYSIVFVSLCKQGGSA--QVIEFLEKIRNAGFDPGALEYSHVISLLIDEGK 742
+ D LYS + S+CK S+ V+ +LE +R F PG +Y+ V+S L++ G+
Sbjct: 224 IDCVIVDPRLYSQLLSSVCKHKDSSCFDVVGYLEDLRKTRFSPGLRDYTVVMSFLVEGGR 283
Query: 741 ADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTTYNT 562
+ S L M+ + PDI+ Y +L I +Y KAD+ FDE+LL+GL P TYN
Sbjct: 284 GKEVVSVLNQMKCDRIEPDIVCYTIVLQGVIADAEYSKADKFFDELLLLGLAPDVYTYNV 343
Query: 561 YIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEVREKM 382
Y++GLCKQ ++E A +M+ M K G +P+V T++ +I G++++AK L +E+
Sbjct: 344 YMNGLCKQNDIEGALKMMSSMNKLGSEPNVITYNILIKALVNAGDLSQAKTLWEEMGING 403
Query: 381 PIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMS 277
+++++ ++ + V A L E M+
Sbjct: 404 VNRNSHTYDIMISAFIEVGDVVSAQGFLEEAFNMN 438
Score = 65.9 bits (159), Expect = 5e-08
Identities = 47/217 (21%), Positives = 94/217 (43%)
Frame = -2
Query: 1158 DAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSIL 979
D V + K R +P + +++ L E G +V VL++ I + ++I+
Sbjct: 251 DVVGYLEDLRKTRFSPGLRDYTVVMSFLVEGGRGKEVVS-VLNQMKCDRIEPDIVCYTIV 309
Query: 978 IEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGF 799
++ + + + S A + + + L PD Y++ LCKQ ++ + + G
Sbjct: 310 LQGVIADAEYSKADKFFDELLLLGLAPDVYTYNVYMNGLCKQNDIEGALKMMSSMNKLGS 369
Query: 798 DPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADE 619
+P + Y+ +I L++ G A + M + G + Y+ ++ AFI D A
Sbjct: 370 EPNVITYNILIKALVNAGDLSQAKTLWEEMGINGVNRNSHTYDIMISAFIEVGDVVSAQG 429
Query: 618 LFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRML 508
+E + + S+ I LC +G ++KA +L
Sbjct: 430 FLEEAFNMNVFAKSSRTEEVISRLCDKGLMDKAVELL 466
>gb|AHB18409.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 480
Score = 265 bits (677), Expect = 4e-68
Identities = 144/396 (36%), Positives = 233/396 (58%), Gaps = 2/396 (0%)
Frame = -2
Query: 1470 SSRNGKRQRSLSEQLAMDTLKKKIAEEPNDGTNHISILTNCFRSYDTDPSPSAYAFVIRH 1291
SS K +++ ++ M + K+ +A + + L Y+ SP AY F+I+
Sbjct: 20 SSHKTKWRQAFTQNQPMVSFKQLVARHNPLQPDFVPSLLQSLSLYNLHQSPQAYHFLIKT 79
Query: 1290 LFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTP 1111
L NR H+ S+L HL+ + F PE +F +++ +G+ R+QDAVD+F+RIP+FR P
Sbjct: 80 LLHNRQFHHIPSLLHHLQL-QHFQTPEYIFTHLVKFYGKANRIQDAVDIFYRIPQFRCFP 138
Query: 1110 TVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMEL 931
+ SLNALLA+LC S+ GL ++ VL + MNIR E +TF +L+ LCR K+++A+E+
Sbjct: 139 SAYSLNALLALLCRSQRGLKLLPQVLLNSLHMNIRLEESTFRLLVCTLCRMNKVAYAIEI 198
Query: 930 LEMMQLHECDPDAGLYSIVFVSLCKQGG--SAQVIEFLEKIRNAGFDPGALEYSHVISLL 757
L+ M + ++S V S+C +G VI F +R GF P +Y V+ L
Sbjct: 199 LQRMLDDGLGVNDKVFSFVLSSVCAEGDLDGEDVIGFWRGLRKLGFSPAMGDYDGVVRFL 258
Query: 756 IDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCS 577
+ +G+ DA L M+ +G P I+ Y +L+ DY ADELFDE+L++GLVP
Sbjct: 259 VKKGRGLDAWDVLNQMKSDGIMPGIISYTMVLNGVTAEGDYILADELFDELLMLGLVPNV 318
Query: 576 TTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQE 397
TY YI LCKQ +E+ +M+ CME+ GCKP+V ++ ++ +K GE+++A+EL++E
Sbjct: 319 YTYKAYIDALCKQNKVEEGIKMVACMEELGCKPNVLIYNTLLRTISKAGEISRARELVKE 378
Query: 396 VREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEM 289
++ K ++ S+ ++ GLVS ++ EA L+ E+
Sbjct: 379 MKYKGIEMNWVSYTIIIDGLVSNGEILEACALVEEV 414
Score = 71.6 bits (174), Expect = 9e-10
Identities = 61/291 (20%), Positives = 129/291 (44%), Gaps = 2/291 (0%)
Frame = -2
Query: 1317 SAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRL--QDAVDL 1144
S + ++ L R +A+ +L+ + D+ V + +F V+ + G L +D +
Sbjct: 177 STFRLLVCTLCRMNKVAYAIEILQRM-LDDGLGVNDKVFSFVLSSVCAEGDLDGEDVIGF 235
Query: 1143 FFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALC 964
+ + K +P + + ++ L + GL DVL++ I ++++++ +
Sbjct: 236 WRGLRKLGFSPAMGDYDGVVRFLVKKGRGLD-AWDVLNQMKSDGIMPGIISYTMVLNGVT 294
Query: 963 RNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGAL 784
G A EL + + + P+ Y +LCKQ + I+ + + G P L
Sbjct: 295 AEGDYILADELFDELLMLGLVPNVYTYKAYIDALCKQNKVEEGIKMVACMEELGCKPNVL 354
Query: 783 EYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEM 604
Y+ ++ + G+ A + M+ +G + + Y I+D + + +A L +E+
Sbjct: 355 IYNTLLRTISKAGEISRARELVKEMKYKGIEMNWVSYTIIIDGLVSNGEILEACALVEEV 414
Query: 603 LLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
L + S T++ I GLC++G + KAR +L M + P + A++
Sbjct: 415 LHKCIFIKSLTFDEVICGLCQRGLVCKARELLGKMVERSISPGARVWEALL 465
>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Solanum lycopersicum]
Length = 496
Score = 258 bits (658), Expect = 7e-66
Identities = 140/398 (35%), Positives = 239/398 (60%), Gaps = 5/398 (1%)
Frame = -2
Query: 1452 RQRSLSEQLAMDTLKKKIAEEPNDG--TNHISILTNCFRSYDTDPSPSAYAFVIRHLFRN 1279
++ L+ QL+M +K + PN T+ +SIL + F +Y+ DP+P+AY F+++ L +N
Sbjct: 48 QEEKLTHQLSM---QKLVESTPNRSPKTHLLSILLDSFSAYECDPTPNAYYFILKTLTQN 104
Query: 1278 RML-AHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTPTVV 1102
+ +L+++ K E F+ PE +F +I+ +G + A ++FF +P +R P+V
Sbjct: 105 PSTWDEIPLILDYIRKFENFETPEYIFTYLIKFYGDSNMTHLAYEMFFTMPAYRCNPSVK 164
Query: 1101 SLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMELLEM 922
SLN L+ VLC++ L +V VL K+ +NI E +TF ILI ALCR GK + A++LL++
Sbjct: 165 SLNCLIWVLCKNNYDLRIVLQVLVKSQLLNIWVEESTFKILIRALCRIGKTNNAVDLLKL 224
Query: 921 MQLHECDPDAGLYSIVFVSL--CKQGGSAQVIEFLEKIRNAGFDPGALEYSHVISLLIDE 748
M + DA + S++ ++ K ++ LE++R G+ P ++ +VI ++
Sbjct: 225 MVDSGFNLDANICSLILSTMPDVKDCVGVEIWGVLEEMRKLGYSPKRVDLCNVIRFYVNN 284
Query: 747 GKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTTY 568
GK DA L M+M G PD++ YN +L+ I +Y ADELFDE+L++GL P TY
Sbjct: 285 GKGIDALEVLNKMKMCGMVPDVVCYNLVLNGLIFEGEYSNADELFDELLVLGLNPDIVTY 344
Query: 567 NTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEVRE 388
N YI+GLCKQ + +A R+L CME GCKP++ T+ ++DG + G ++ KE++ +++
Sbjct: 345 NVYINGLCKQDKMVEALRVLGCMEDLGCKPEMNTYHTILDGLCRCGMLSSVKEVLGQMKS 404
Query: 387 KMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
K + ++ + +++ ++ +V+EA+ LL EM M F
Sbjct: 405 KGLQLSSHIYGVIINCMIRNGEVDEAYNLLHEMVDMGF 442
Score = 68.9 bits (167), Expect = 6e-09
Identities = 51/226 (22%), Positives = 99/226 (43%)
Frame = -2
Query: 1128 KFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKL 949
K +P V L ++ + +G+ + +VL+K + + +++++ L G+
Sbjct: 264 KLGYSPKRVDLCNVIRFYVNNGKGIDAL-EVLNKMKMCGMVPDVVCYNLVLNGLIFEGEY 322
Query: 948 SFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGALEYSHV 769
S A EL + + + +PD Y++ LCKQ + + L + + G P Y +
Sbjct: 323 SNADELFDELLVLGLNPDIVTYNVYINGLCKQDKMVEALRVLGCMEDLGCKPEMNTYHTI 382
Query: 768 ISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGL 589
+ L G L M+ +G + IY I++ I + +A L EM+ +G
Sbjct: 383 LDGLCRCGMLSSVKEVLGQMKSKGLQLSSHIYGVIINCMIRNGEVDEAYNLLHEMVDMGF 442
Query: 588 VPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
VP S T++ I LC +G+ + +L M P + ++ A +
Sbjct: 443 VPQSITFDGLIGLLCNKGSFYEVMELLSIMSTKNLVPGIRSWEAFV 488
>ref|XP_006854116.1| hypothetical protein AMTR_s00048p00149840 [Amborella trichopoda]
gi|548857785|gb|ERN15583.1| hypothetical protein
AMTR_s00048p00149840 [Amborella trichopoda]
Length = 464
Score = 245 bits (625), Expect = 4e-62
Identities = 124/339 (36%), Positives = 213/339 (62%)
Frame = -2
Query: 1290 LFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTP 1111
L +N + + ++L L+ + +F PE + +IQ+ + +++A+DLFF +P R P
Sbjct: 91 LAQNPQFSGLKTLLRCLQSNRKFSTPETRIIGLIQSCASSKMVKEALDLFFAMPHLRCQP 150
Query: 1110 TVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMEL 931
+ SLNALL+VLC++ + +V ++L K EMNIR +A++F ILI +LCR GKL FA+EL
Sbjct: 151 STTSLNALLSVLCDT-DSFHLVPELLIKTLEMNIRLDASSFRILIGSLCRIGKLGFAIEL 209
Query: 930 LEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGALEYSHVISLLID 751
L +M C PD+G Y+ + LC+ G +++ FL+++++AGF P + Y+ VI L
Sbjct: 210 LRLMPDQGCWPDSGFYAEILCKLCEFGEFSEIYGFLDEMKDAGFFPDKIAYAIVIDSLAK 269
Query: 750 EGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTT 571
G+ ++A + L M++EG +PD + Y ++D F ++K+A E+FDEML +GLVP T
Sbjct: 270 GGRLNEARAILNRMKLEGAKPDTITYTSMMDGFYKIGEFKQAGEVFDEMLAMGLVPDVFT 329
Query: 570 YNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEVR 391
Y+ YI+GLC++ LE+A+ +L M + GC+P+V T++ +I + G + +A EL+ E+
Sbjct: 330 YSVYINGLCRERKLEEAKEVLCVMREMGCRPNVITYNTLIRTFCSDGNLRRADELVAEMG 389
Query: 390 EKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLMEMARMSF 274
++ ++ L++ + E V EA++LL++M F
Sbjct: 390 SNGVCGNSVTYRTLINAYLREGMVVEANELLVQMVGKGF 428
Score = 100 bits (249), Expect = 2e-18
Identities = 75/287 (26%), Positives = 135/287 (47%)
Frame = -2
Query: 1254 VLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVDLFFRIPKFRSTPTVVSLNALLAVL 1075
+++ LE + R D F +I + + G+L A++L +P P +L L
Sbjct: 175 LIKTLEMNIRLDASS--FRILIGSLCRIGKLGFAIELLRLMPDQGCWPDSGFYAEILCKL 232
Query: 1074 CESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKLSFAMELLEMMQLHECDPD 895
CE E + G L + + + ++I+I++L + G+L+ A +L M+L PD
Sbjct: 233 CEFGEFSEIYG-FLDEMKDAGFFPDKIAYAIVIDSLAKGGRLNEARAILNRMKLEGAKPD 291
Query: 894 AGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGALEYSHVISLLIDEGKADDAHSFLV 715
Y+ + K G Q E +++ G P YS I+ L E K ++A L
Sbjct: 292 TITYTSMMDGFYKIGEFKQAGEVFDEMLAMGLVPDVFTYSVYINGLCRERKLEEAKEVLC 351
Query: 714 MMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGLVPCSTTYNTYIHGLCKQG 535
+MR G RP+++ YN ++ F + ++ADEL EM G+ S TY T I+ ++G
Sbjct: 352 VMREMGCRPNVITYNTLIRTFCSDGNLRRADELVAEMGSNGVCGNSVTYRTLINAYLREG 411
Query: 534 NLEKARRMLICMEKAGCKPDVETFSAVIDGYAKTGEMAKAKELMQEV 394
+ +A +L+ M G P T+ A++ ++ +A ++E+
Sbjct: 412 MVVEANELLVQMVGKGFFPHFSTWEALLSSTVFKWDILQALNALEEL 458
Score = 69.3 bits (168), Expect = 4e-09
Identities = 53/242 (21%), Positives = 107/242 (44%)
Frame = -2
Query: 1326 PSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDERFDVPEGMFVTVIQNFGQTGRLQDAVD 1147
P YA ++ L + + L+ + KD F + + VI + + GRL +A
Sbjct: 220 PDSGFYAEILCKLCEFGEFSEIYGFLDEM-KDAGFFPDKIAYAIVIDSLAKGGRLNEARA 278
Query: 1146 LFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEAL 967
+ R+ + P ++ +++ + E G+V + M + + T+S+ I L
Sbjct: 279 ILNRMKLEGAKPDTITYTSMMDGFYKIGE-FKQAGEVFDEMLAMGLVPDVFTYSVYINGL 337
Query: 966 CRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGA 787
CR KL A E+L +M+ C P+ Y+ + + C G + E + ++ + G +
Sbjct: 338 CRERKLEEAKEVLCVMREMGCRPNVITYNTLIRTFCSDGNLRRADELVAEMGSNGVCGNS 397
Query: 786 LEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDE 607
+ Y +I+ + EG +A+ LV M +G P + +L + + D +A +E
Sbjct: 398 VTYRTLINAYLREGMVVEANELLVQMVGKGFFPHFSTWEALLSSTVFKWDILQALNALEE 457
Query: 606 ML 601
++
Sbjct: 458 LI 459
>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 373
Score = 227 bits (578), Expect = 1e-56
Identities = 118/293 (40%), Positives = 185/293 (63%), Gaps = 2/293 (0%)
Frame = -2
Query: 1164 LQDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFS 985
+Q+A+ LF+R P FR P+V LN LL+VLC + EGL V +VL K+ +MNIR E ++F
Sbjct: 1 MQNAIHLFYRTPNFRCVPSVYLLNTLLSVLCRTNEGLNFVPEVLLKSQDMNIRMEESSFR 60
Query: 984 ILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQG--GSAQVIEFLEKIR 811
+LI ALC K+ +A+E+ M D+ + S++ SLC Q S++V+ FL ++R
Sbjct: 61 LLINALCSINKVGYAVEMFNCMINDGFSVDSKICSLLLSSLCYQADISSSEVMRFLGELR 120
Query: 810 NAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYK 631
GF PG +YS VI+ L+ G +A + L M+++G +PDI+ Y +L+ I Y
Sbjct: 121 KFGFCPGIKDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYS 180
Query: 630 KADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
KADELFDE+L+ GLVP TYN YI+GLCKQ N+E M+ ME+ GCKP++ T++ ++
Sbjct: 181 KADELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILL 240
Query: 450 DGYAKTGEMAKAKELMQEVREKMPIIDTNSF*NLVHGLVSEDQVEEAHQLLME 292
+ K GE ++A++L++++ K + ++ ++HGL S ++ +A LL E
Sbjct: 241 EDLCKNGEDSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEE 293
Score = 70.9 bits (172), Expect = 1e-09
Identities = 54/202 (26%), Positives = 88/202 (43%)
Frame = -2
Query: 990 FSILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIR 811
+S +I L R G A+ +L M+L PD Y+ V + G ++ E +++
Sbjct: 131 YSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKADELFDELL 190
Query: 810 NAGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYK 631
G P Y+ I L + + + M G +P+++ YN +L+ +
Sbjct: 191 VFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGEDS 250
Query: 630 KADELFDEMLLIGLVPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
+A +L +M G+ TY IHGL G + KA +L G P F VI
Sbjct: 251 RARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALDKGLCPRGLRFDEVI 310
Query: 450 DGYAKTGEMAKAKELMQEVREK 385
G +TG + KA EL+++V K
Sbjct: 311 YGLCQTGSICKALELLEKVVNK 332
Score = 67.0 bits (162), Expect = 2e-08
Identities = 50/226 (22%), Positives = 95/226 (42%)
Frame = -2
Query: 1128 KFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTFSILIEALCRNGKL 949
KF P + + ++ L G+ + +VL++ I+ + ++ ++ + NG
Sbjct: 121 KFGFCPGIKDYSKVINFLVRRGMGMEAL-NVLNQMKLDGIKPDIVCYTTVLNGVIANGVY 179
Query: 948 SFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRNAGFDPGALEYSHV 769
S A EL + + + PD Y++ LCKQ IE + + G P + Y+ +
Sbjct: 180 SKADELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNIL 239
Query: 768 ISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRILDAFILANDYKKADELFDEMLLIGL 589
+ L G+ A + M +G + Y ++ KA L +E L GL
Sbjct: 240 LEDLCKNGEDSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALDKGL 299
Query: 588 VPCSTTYNTYIHGLCKQGNLEKARRMLICMEKAGCKPDVETFSAVI 451
P ++ I+GLC+ G++ KA +L + P V + ++
Sbjct: 300 CPRGLRFDEVIYGLCQTGSICKALELLEKVVNKNVSPGVRVWETLL 345
Score = 58.9 bits (141), Expect = 6e-06
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 1/229 (0%)
Frame = -2
Query: 1344 RSYDTDPSPSAYAFVIRHLFRNRMLAHVSSVLEHLEKDE-RFDVPEGMFVTVIQNFGQTG 1168
R + P Y+ VI L R M +VL ++ D + D+ + TV+ G
Sbjct: 120 RKFGFCPGIKDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIV--CYTTVLNGVIANG 177
Query: 1167 RLQDAVDLFFRIPKFRSTPTVVSLNALLAVLCESKEGLAMVGDVLSKAPEMNIRFEATTF 988
A +LF + F P V + N + LC+ A + ++++ E+ + T+
Sbjct: 178 VYSKADELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGI-EMVTSMEELGCKPNLITY 236
Query: 987 SILIEALCRNGKLSFAMELLEMMQLHECDPDAGLYSIVFVSLCKQGGSAQVIEFLEKIRN 808
+IL+E LC+NG+ S A +L+ M Y ++ L G + LE+ +
Sbjct: 237 NILLEDLCKNGEDSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALD 296
Query: 807 AGFDPGALEYSHVISLLIDEGKADDAHSFLVMMRMEGKRPDIMIYNRIL 661
G P L + VI L G A L + + P + ++ +L
Sbjct: 297 KGLCPRGLRFDEVIYGLCQTGSICKALELLEKVVNKNVSPGVRVWETLL 345