BLASTX nr result

ID: Zingiber24_contig00009304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00009304
         (1115 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY06913.1| Translation initiation factor IF-2, putative [The...    60   1e-06
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    60   2e-06

>gb|EOY06913.1| Translation initiation factor IF-2, putative [Theobroma cacao]
          Length = 326

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
 Frame = -2

Query: 1114 GSFCVICFAVLDAVPAP-AIAHCSKCPSASHISCLPHPNLASRFLCHCCRNPDSFSYY-- 944
            G FC IC  V +  P P     C KCPS SH+SC    + +S F C  C NP+ FS++  
Sbjct: 43   GLFCPICLEVFNESPPPHQRLICLKCPSISHLSCSSSSSQSS-FTCPPCSNPN-FSFFNV 100

Query: 943  ---------------PAGEVPIESLEAETRTIDTEXXXXXXXXXXXXXXSMXXXXXXXXX 809
                             G       + + R ID E              SM         
Sbjct: 101  DPNITNKKPKSTPDHQGGSNDDHDNDKKKRVIDREAAKALLAAAKIAAASMSKAAAVARV 160

Query: 808  XXXXXVKDAIIARTKAKDMLERAALISHKESEKVHGANDSNNKLRTPMAAAVNPEKKMKA 629
                 VK+A +A+ +AK+ LER A ++ K+++++  A     K +T  AAA   + K  A
Sbjct: 161  EAERRVKEATLAKKRAKEALERLAFLARKDNDRLKSALVGIPKSKTAAAAAAIADPKTNA 220


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
            gi|223541640|gb|EEF43189.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 186

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
 Frame = -2

Query: 1114 GSFCVICFAVLD----AVPAPAI-AHCSKCPSASHISCLPHPNLASRFLCHCCRNPDSFS 950
            G FC  CF V D     VPAP     C KCPS SH+SCLP  +  S FLC  C +P +FS
Sbjct: 41   GLFCPFCFHVYDHDSLLVPAPEERVMCLKCPSISHLSCLPPFHNTSPFLCPPCSSP-NFS 99

Query: 949  YYPAGEVPIESLEAETRTIDTEXXXXXXXXXXXXXXSMXXXXXXXXXXXXXXVKDAIIAR 770
            ++    +P +    +  +ID +              SM              VK+A +A+
Sbjct: 100  FF---NLPHD----DDVSIDIDSARALVAAAKIAAVSMAKAAALARLEAERRVKEATLAK 152

Query: 769  TKAKDMLERAALISHKESEKVHGANDSNNKL 677
             +A++ LER A +S ++  K H A+  + ++
Sbjct: 153  KRAREALERLAFLSAQDKLK-HSAHKLSKRM 182


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