BLASTX nr result
ID: Zingiber24_contig00009274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00009274
(687 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 99 1e-18
dbj|BAJ99124.1| predicted protein [Hordeum vulgare subsp. vulgare] 98 3e-18
ref|XP_004972801.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 97 5e-18
ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group] g... 97 6e-18
gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indi... 95 2e-17
ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [S... 94 4e-17
gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| pu... 92 2e-16
ref|NP_001151265.1| LOC100284898 precursor [Zea mays] gi|1956453... 91 3e-16
ref|NP_001047750.1| Os02g0682300 [Oryza sativa Japonica Group] g... 91 4e-16
gb|EEC73793.1| hypothetical protein OsI_08484 [Oryza sativa Indi... 91 4e-16
dbj|BAJ92172.1| predicted protein [Hordeum vulgare subsp. vulgare] 88 3e-15
ref|XP_002448380.1| hypothetical protein SORBIDRAFT_06g026310 [S... 87 6e-15
ref|NP_001148674.1| RING-H2 finger protein ATL2L [Zea mays] gi|1... 87 6e-15
tpg|DAA36337.1| TPA: putative RING zinc finger domain superfamil... 86 8e-15
ref|XP_002452750.1| hypothetical protein SORBIDRAFT_04g031740 [S... 85 2e-14
gb|AEQ67396.1| RING finger protein [Triticum aestivum] 84 4e-14
gb|EMJ12149.1| hypothetical protein PRUPE_ppa024049mg [Prunus pe... 84 5e-14
gb|AFW59063.1| putative RING zinc finger domain superfamily prot... 84 5e-14
gb|EOY23711.1| RING-H2 finger protein ATL2L, putative [Theobroma... 83 7e-14
ref|NP_001150265.1| RING-H2 finger protein ATL2L [Zea mays] gi|1... 82 1e-13
>ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium
distachyon]
Length = 184
Score = 99.0 bits (245), Expect = 1e-18
Identities = 50/81 (61%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 KKRLRVVEFASLR-QRGCHVDDDPTC-VICLGQLEARHRVRELGNCGHGFHVECIDRWVD 435
K RL V +A LR +RG P C +CLG LEARHRVRELGNC H FH CID+WVD
Sbjct: 85 KARLPAVRYADLRSRRGAGNAPAPACCAVCLGALEARHRVRELGNCAHAFHKACIDKWVD 144
Query: 436 GGQVRCPLCRASLLPPAAGAA 498
GQ CPLCRA LLP A AA
Sbjct: 145 KGQATCPLCRALLLPAAEDAA 165
>dbj|BAJ99124.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 97.8 bits (242), Expect = 3e-18
Identities = 46/76 (60%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDDDPT---CVICLGQLEARHRVRELGNCGHGFHVECIDRWV 432
K RL V +A LR R C C +CLG LEARHRVRELGNC H FH CID+WV
Sbjct: 84 KARLPAVRYADLRSRRCAAGATAVSTCCAVCLGALEARHRVRELGNCAHAFHKACIDKWV 143
Query: 433 DGGQVRCPLCRASLLP 480
D GQ CPLCRA LLP
Sbjct: 144 DKGQATCPLCRALLLP 159
>ref|XP_004972801.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Setaria italica]
Length = 180
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/81 (56%), Positives = 51/81 (62%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDGG 441
K RL V +A L + +C +CLG LEARHRVRELGNC H FH CID+WVD G
Sbjct: 86 KARLPAVRYADLLRARRAPAPAASCAVCLGALEARHRVRELGNCAHAFHKACIDKWVDKG 145
Query: 442 QVRCPLCRASLLPPAAGAAVG 504
Q CPLCRA LLP A A G
Sbjct: 146 QATCPLCRALLLPGAPDAGAG 166
>ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group]
gi|37805860|dbj|BAC99511.1| unknown protein [Oryza
sativa Japonica Group] gi|113622999|dbj|BAF22944.1|
Os08g0157400 [Oryza sativa Japonica Group]
gi|149392499|gb|ABR26052.1| ring zinc finger
protein-like [Oryza sativa Indica Group]
gi|215766069|dbj|BAG98297.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 176
Score = 96.7 bits (239), Expect = 6e-18
Identities = 47/79 (59%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 KKRLRVVEFAS-LRQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDG 438
K RL V +A +R R +CV+CLG LEARHRVRELGNC H FH CID+WVD
Sbjct: 82 KARLPAVRYADFVRCRRAAAAAAASCVVCLGALEARHRVRELGNCAHAFHKACIDKWVDK 141
Query: 439 GQVRCPLCRASLLPPAAGA 495
GQ CPLCRA+LLP A A
Sbjct: 142 GQATCPLCRAALLPSADDA 160
>gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indica Group]
Length = 176
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/76 (59%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 262 KKRLRVVEFAS-LRQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDG 438
K RL V +A +R R +C +CLG LEARHRVRELGNC H FH CID+WVD
Sbjct: 82 KARLPAVRYADFVRCRRAAAAAAASCAVCLGALEARHRVRELGNCAHAFHKACIDKWVDK 141
Query: 439 GQVRCPLCRASLLPPA 486
GQ CPLCRA+LLP A
Sbjct: 142 GQATCPLCRAALLPSA 157
>ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [Sorghum bicolor]
gi|241941430|gb|EES14575.1| hypothetical protein
SORBIDRAFT_07g003830 [Sorghum bicolor]
Length = 189
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/86 (53%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDDDPT-----CVICLGQLEARHRVRELGNCGHGFHVECIDR 426
K RL V +A L + P C +CLG LEARHRVRELGNC H FH CID+
Sbjct: 91 KARLPAVRYADLLRSRRASASPPAPVPAVCAVCLGALEARHRVRELGNCAHAFHKACIDK 150
Query: 427 WVDGGQVRCPLCRASLLPPAAGAAVG 504
WVD GQ CPLCRA LLP + A G
Sbjct: 151 WVDKGQATCPLCRALLLPDPSSAGAG 176
>gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 189
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/84 (52%), Positives = 49/84 (58%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDGG 441
K RL V +A L C +CLG L+ARHRVRELGNC H FH CID+WVD G
Sbjct: 93 KARLPAVRYADLLGARRAPPGPAVCAVCLGALQARHRVRELGNCAHAFHKACIDKWVDKG 152
Query: 442 QVRCPLCRASLLPPAAGAAVGTDG 513
Q CPLCRA LLP + DG
Sbjct: 153 QATCPLCRAFLLPGLSAGDGDGDG 176
>ref|NP_001151265.1| LOC100284898 precursor [Zea mays] gi|195645396|gb|ACG42166.1| RING
zinc finger protein-like [Zea mays]
Length = 156
Score = 91.3 bits (225), Expect = 3e-16
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDGG 441
K RL V +A L C +CLG L+ARHRVRELGNC H FH CID+WVD G
Sbjct: 64 KARLPAVRYADLLGARRAPPGPAVCAVCLGALQARHRVRELGNCAHAFHKACIDKWVDKG 123
Query: 442 QVRCPLCRASLLP 480
Q CPLCRA LLP
Sbjct: 124 QATCPLCRAFLLP 136
>ref|NP_001047750.1| Os02g0682300 [Oryza sativa Japonica Group]
gi|50251893|dbj|BAD27831.1| unknown protein [Oryza
sativa Japonica Group] gi|113537281|dbj|BAF09664.1|
Os02g0682300 [Oryza sativa Japonica Group]
gi|222623455|gb|EEE57587.1| hypothetical protein
OsJ_07943 [Oryza sativa Japonica Group]
Length = 164
Score = 90.5 bits (223), Expect = 4e-16
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Frame = +1
Query: 262 KKRLRVVEFASL---RQRGCH-VDDDPT---CVICLGQLEARHRVRELGNCGHGFHVECI 420
K RL +EFA L + GCH DDD C++CL +LEA VR LGNC H FH CI
Sbjct: 61 KDRLPPLEFAQLLAASEHGCHGCDDDEAVAGCIVCLERLEADDVVRRLGNCAHAFHRGCI 120
Query: 421 DRWVDGGQVRCPLCRASLLPPAAGAAVGTDGKWRRFLRRV 540
DRW+D G++ CPLCR++LLP A AA G G+ R R+
Sbjct: 121 DRWIDLGRLTCPLCRSTLLPRARPAA-GPRGRLGRLATRL 159
>gb|EEC73793.1| hypothetical protein OsI_08484 [Oryza sativa Indica Group]
Length = 164
Score = 90.5 bits (223), Expect = 4e-16
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Frame = +1
Query: 262 KKRLRVVEFASL---RQRGCH-VDDDPT---CVICLGQLEARHRVRELGNCGHGFHVECI 420
K RL +EFA L + GCH DDD C++CL +LEA VR LGNC H FH CI
Sbjct: 61 KDRLPPLEFAQLLAASEHGCHGCDDDEAVAGCIVCLEKLEADDVVRRLGNCAHAFHRGCI 120
Query: 421 DRWVDGGQVRCPLCRASLLPPAAGAAVGTDGKWRRFLRRV 540
DRW+D G++ CPLCR++LLP A AA G G+ R R+
Sbjct: 121 DRWIDLGRLTCPLCRSTLLPRARPAA-GPRGRLGRLATRL 159
>dbj|BAJ92172.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 147
Score = 87.8 bits (216), Expect = 3e-15
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Frame = +1
Query: 262 KKRLRVVEFASL-----RQRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDR 426
K RL VEF+ L +Q+GCH D C++CL +LEA VR LGNC H FH CID
Sbjct: 57 KARLPAVEFSWLARPEQQQQGCH-DGAAACIVCLERLEAADEVRRLGNCAHAFHRGCIDG 115
Query: 427 WVDGGQVRCPLCRASLLPPAAGAAVGTDGKWRRFLRRVW 543
W+D G+ CPLCR+ LLP A A+ L RVW
Sbjct: 116 WIDLGRTTCPLCRSHLLPRARRASPS-------LLTRVW 147
>ref|XP_002448380.1| hypothetical protein SORBIDRAFT_06g026310 [Sorghum bicolor]
gi|241939563|gb|EES12708.1| hypothetical protein
SORBIDRAFT_06g026310 [Sorghum bicolor]
Length = 159
Score = 86.7 bits (213), Expect = 6e-15
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDD-DPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDG 438
K+RL +VEF L +PTC +CL +LEA VR LGNC H FH CIDRW+D
Sbjct: 71 KQRLPLVEFLELSSSSSSSGAAEPTCRVCLERLEATDEVRRLGNCTHAFHTRCIDRWIDL 130
Query: 439 GQVRCPLCRASLLPPAAGAAVG 504
G+V CPLCR+ LLP +G
Sbjct: 131 GEVTCPLCRSHLLPRRRAGILG 152
>ref|NP_001148674.1| RING-H2 finger protein ATL2L [Zea mays] gi|195621306|gb|ACG32483.1|
RING-H2 finger protein ATL2L [Zea mays]
Length = 154
Score = 86.7 bits (213), Expect = 6e-15
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCH----VDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRW 429
K+RL +VEF L V +PTC +CL LEA+ VR LGNC H FH CIDRW
Sbjct: 65 KRRLPLVEFLELVDSSSSPSSGVGAEPTCRVCLEWLEAKDEVRRLGNCTHAFHTRCIDRW 124
Query: 430 VDGGQVRCPLCRASLLP 480
+D G+V CPLCR+ LLP
Sbjct: 125 IDLGEVTCPLCRSHLLP 141
>tpg|DAA36337.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 154
Score = 86.3 bits (212), Expect = 8e-15
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGCHVDD----DPTCVICLGQLEARHRVRELGNCGHGFHVECIDRW 429
K+RL +VEF L +PTC +CL LEA+ VR LGNC H FH CIDRW
Sbjct: 65 KRRLPLVEFLELVDSSSSPSSGLGAEPTCRVCLEWLEAKDEVRRLGNCTHAFHTRCIDRW 124
Query: 430 VDGGQVRCPLCRASLLPPAAGAAVG 504
+D G+V CPLCR+ LLP +G
Sbjct: 125 IDLGEVTCPLCRSHLLPRRRAGLLG 149
>ref|XP_002452750.1| hypothetical protein SORBIDRAFT_04g031740 [Sorghum bicolor]
gi|241932581|gb|EES05726.1| hypothetical protein
SORBIDRAFT_04g031740 [Sorghum bicolor]
Length = 179
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 319 DDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDGGQVRCPLCRASLLP-PAAGA 495
+D P C++CL LEA VR LGNC H FH CIDRW+D G+ CPLCR+ LLP P A
Sbjct: 107 EDAPACIVCLETLEATDEVRRLGNCAHAFHRACIDRWIDLGRATCPLCRSDLLPRPPVRA 166
Query: 496 AVGTDGKWRRFLRRVW 543
+ G+ R L RVW
Sbjct: 167 RL---GRLARRLTRVW 179
>gb|AEQ67396.1| RING finger protein [Triticum aestivum]
Length = 154
Score = 84.0 bits (206), Expect = 4e-14
Identities = 47/103 (45%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Frame = +1
Query: 262 KKRLRVVEFASLR---QRGCHVDDDP------TCVICLGQLEARHRVRELGNCGHGFHVE 414
K+RL VEF L Q+ H DD TC++CL +L A VR LGNC H FH
Sbjct: 57 KERLPAVEFGCLARPAQQQQHDGDDDEVAAAATCIVCLERLRATDEVRRLGNCAHAFHRG 116
Query: 415 CIDRWVDGGQVRCPLCRASLLPPAAGAAVGTDGKWRRFLRRVW 543
CID W+D G+ CPLCR+ LLP A DG L RVW
Sbjct: 117 CIDGWIDLGRTTCPLCRSHLLPRAR-----RDGPLASLLTRVW 154
>gb|EMJ12149.1| hypothetical protein PRUPE_ppa024049mg [Prunus persica]
Length = 192
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 KKRLRVVEFASLRQRGC-HVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWVDG 438
K+RL VVEF + +R H +D C ICL +E H VRE NC H FH EC+D WV+
Sbjct: 90 KRRLPVVEFGQVLERYTKHAGEDTVCYICLEYIEGSHEVREQCNCDHVFHRECLDSWVNQ 149
Query: 439 GQVRCPLCRASLLPP 483
GQ+ CPLCRA L P
Sbjct: 150 GQLTCPLCRAMLFSP 164
>gb|AFW59063.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 161
Score = 83.6 bits (205), Expect = 5e-14
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 262 KKRLRVVEFASLR----QRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRW 429
K+ L +VEF L + PTC +CL +LEA VR LGNC H FH CIDRW
Sbjct: 70 KRHLPLVEFLELMVVAPSPSSGAEAAPTCRVCLERLEAADGVRRLGNCAHAFHARCIDRW 129
Query: 430 VDGGQVRCPLCRASLLPPAAGAAVG 504
+D G+V CPLCR+ LLP +G
Sbjct: 130 IDLGEVTCPLCRSHLLPRRRAGLLG 154
>gb|EOY23711.1| RING-H2 finger protein ATL2L, putative [Theobroma cacao]
Length = 186
Score = 83.2 bits (204), Expect = 7e-14
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 KKRLRVVEFASLRQR---GCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRWV 432
K +L V++++ +R C VDD C++C+ ++ H VRELG+C H FH +C+D W+
Sbjct: 47 KNQLPVMQYSCFVKRKSGACVVDDPTCCIVCMNFVDRSHEVRELGSCYHVFHRDCLDAWI 106
Query: 433 DGGQVRCPLCRASLLPPAAGAAVGTDGKWRR 525
D G + CPLC++ LLP ++ WR+
Sbjct: 107 DHGNITCPLCKSKLLPAQGNSSRFGSDPWRK 137
>ref|NP_001150265.1| RING-H2 finger protein ATL2L [Zea mays] gi|195637944|gb|ACG38440.1|
RING-H2 finger protein ATL2L [Zea mays]
Length = 161
Score = 82.4 bits (202), Expect = 1e-13
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Frame = +1
Query: 262 KKRLRVVEFASLR----QRGCHVDDDPTCVICLGQLEARHRVRELGNCGHGFHVECIDRW 429
K+ L +VEF L + PTC +CL +LEA VR LGNC H FH CIDRW
Sbjct: 70 KRHLPLVEFLELMVVAPSSPSGAEAAPTCRVCLERLEAADGVRRLGNCAHAFHARCIDRW 129
Query: 430 VDGGQVRCPLCRASLLP 480
+D G+V CPLCR+ LLP
Sbjct: 130 IDLGEVTCPLCRSHLLP 146