BLASTX nr result
ID: Zingiber24_contig00008936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00008936
(661 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao] 233 5e-59
ref|XP_006848248.1| hypothetical protein AMTR_s00013p00039290 [A... 229 4e-58
ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citr... 221 1e-55
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 220 3e-55
ref|XP_002298632.2| ribosomal protein L27 precursor [Populus tri... 219 7e-55
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 219 7e-55
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 218 1e-54
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 218 1e-54
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 216 4e-54
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 216 6e-54
ref|XP_004971106.1| PREDICTED: 50S ribosomal protein L27, chloro... 214 2e-53
ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Caps... 214 2e-53
ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 213 3e-53
ref|XP_003522956.1| PREDICTED: 50S ribosomal protein L27, chloro... 213 3e-53
gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis] 213 4e-53
ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 213 4e-53
ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloro... 213 4e-53
ref|XP_002456869.1| hypothetical protein SORBIDRAFT_03g044280 [S... 213 5e-53
gb|AAM62675.1| 50S ribosomal protein L27 [Arabidopsis thaliana] 213 5e-53
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana... 211 1e-52
>gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao]
Length = 191
Score = 233 bits (593), Expect = 5e-59
Identities = 116/161 (72%), Positives = 131/161 (81%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 ATVGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVS----FPLTIESAHKKGAGS 356
AT+ FN+ AF+ +L+GE+ TAS FPLTIESAHKKGAGS
Sbjct: 4 ATMSFNLVGAFRGLSLSSSSTSSFLKGELGSIPKTATASFPRKSPFPLTIESAHKKGAGS 63
Query: 357 TKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLVKF 536
TKNGRDSRG+RLGVKI+GDQ A+PGAIIVRQRGTKFHPG NVGLGKDHTIFSLIDGLVKF
Sbjct: 64 TKNGRDSRGQRLGVKIFGDQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKF 123
Query: 537 EKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
EK+GPD+KKVSVYPR+ QPENPNSYRARKREYFR++RER+K
Sbjct: 124 EKFGPDRKKVSVYPRVVQPENPNSYRARKREYFRMRRERRK 164
>ref|XP_006848248.1| hypothetical protein AMTR_s00013p00039290 [Amborella trichopoda]
gi|548851554|gb|ERN09829.1| hypothetical protein
AMTR_s00013p00039290 [Amborella trichopoda]
Length = 187
Score = 229 bits (585), Expect = 4e-58
Identities = 115/163 (70%), Positives = 130/163 (79%), Gaps = 4/163 (2%)
Frame = +3
Query: 183 SMATVGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVSF----PLTIESAHKKGA 350
S AT FN+ AFK RG+ R+P +S+SF PL IE+AHKKGA
Sbjct: 3 SAATCSFNLVGAFKGLSLLPSSSSSCFRGDFRVPSVTNGSSLSFTLKFPLIIEAAHKKGA 62
Query: 351 GSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLV 530
GSTKNGRDS G+RLGVKIYGDQVA+PGAIIVRQRGTKFHPG NVGLG+DHTIFSLIDGLV
Sbjct: 63 GSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGRDHTIFSLIDGLV 122
Query: 531 KFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
KFEK+GPD+KK+SVYPR+ QPENPNSYRARK+E FRLQRER+K
Sbjct: 123 KFEKFGPDRKKISVYPRVLQPENPNSYRARKKENFRLQRERRK 165
>ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citrus clementina]
gi|568831655|ref|XP_006470076.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like [Citrus
sinensis] gi|557549663|gb|ESR60292.1| hypothetical
protein CICLE_v10016825mg [Citrus clementina]
Length = 192
Score = 221 bits (563), Expect = 1e-55
Identities = 111/161 (68%), Positives = 129/161 (80%), Gaps = 4/161 (2%)
Frame = +3
Query: 189 ATVGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVS----FPLTIESAHKKGAGS 356
A++ ++ +FK +L+G+ + T S+ PLTIESAHKKGAGS
Sbjct: 4 ASMSASLIGSFKGLSLSSSSSSSFLKGDFTVCPKSVTVSLPPTSPLPLTIESAHKKGAGS 63
Query: 357 TKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLVKF 536
TKNGRDSRG+RLGVKI+GDQVA+PGAIIVRQRGTKFHPG NVGLGKDHTIFSLIDGLVKF
Sbjct: 64 TKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKF 123
Query: 537 EKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
EK+GPD+K++SVYPR QPENPNSYRARKREYFRLQRE+KK
Sbjct: 124 EKFGPDRKQISVYPREVQPENPNSYRARKREYFRLQREKKK 164
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 220 bits (561), Expect = 3e-55
Identities = 106/116 (91%), Positives = 112/116 (96%)
Frame = +3
Query: 312 FPLTIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLG 491
FPLTIE+AHKKGAGSTKNGRDS+G+RLGVKI+GDQVA+PG+IIVRQRGTKFH G NVGLG
Sbjct: 42 FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLG 101
Query: 492 KDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
KDHTIFSLIDGLVKFEKYGPDKKKVSVYPR QPENPNSYRARKREYFRLQRERKK
Sbjct: 102 KDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKK 157
>ref|XP_002298632.2| ribosomal protein L27 precursor [Populus trichocarpa]
gi|550348790|gb|EEE83437.2| ribosomal protein L27
precursor [Populus trichocarpa]
Length = 194
Score = 219 bits (557), Expect = 7e-55
Identities = 111/166 (66%), Positives = 125/166 (75%), Gaps = 11/166 (6%)
Frame = +3
Query: 195 VGFNIASAFKXXXXXXXXXXXYLRGEVR-----------LPYPRRTASVSFPLTIESAHK 341
V FN+ +FK + +G+V LP+ + PLTI+ AHK
Sbjct: 3 VSFNLIGSFKGLSLSSSSSSSFFKGDVGSLKFGLKSSALLPF-KAPVKAPLPLTIQMAHK 61
Query: 342 KGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLID 521
KGAGSTKNGRDS+GKRLGVKIYGDQ A+PGAIIVRQRGTKFHPG NVG+GKDHTIFSLID
Sbjct: 62 KGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIFSLID 121
Query: 522 GLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
GLVKFEK+GPD+KK+SVYPR QPENPNSYRARKRE FRLQRERKK
Sbjct: 122 GLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQRERKK 167
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 219 bits (557), Expect = 7e-55
Identities = 104/117 (88%), Positives = 112/117 (95%)
Frame = +3
Query: 309 SFPLTIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGL 488
S PLTIESAHKKGAGSTKNGRDSRG+RLGVKIYGDQVA+PGAIIVRQRGTKFHPG NVGL
Sbjct: 43 SLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGL 102
Query: 489 GKDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
GKDHTIFSLIDGLVKFEK+GPD+KK+SVYP + QPENPNS RA+KREYFR+QRERKK
Sbjct: 103 GKDHTIFSLIDGLVKFEKFGPDRKKISVYPXVLQPENPNSCRAKKREYFRMQRERKK 159
>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 197
Score = 218 bits (555), Expect = 1e-54
Identities = 110/170 (64%), Positives = 126/170 (74%), Gaps = 11/170 (6%)
Frame = +3
Query: 183 SMATVGFNIASAFKXXXXXXXXXXXYLRGEVR-----------LPYPRRTASVSFPLTIE 329
++ V FN+ +FK + +G+ LP+ + PLTI+
Sbjct: 2 ALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPF-KAPVKAPLPLTIQ 60
Query: 330 SAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIF 509
AHKKGAGSTKNGRDS+GKRLGVKIYGDQ A+PGAIIVRQRGTKFHPG NVG+GKDHTIF
Sbjct: 61 MAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIF 120
Query: 510 SLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
SLIDGLVKFEK+GPD+KK+SVYPR QPENPNSYRARKRE FRLQRERKK
Sbjct: 121 SLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQRERKK 170
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 218 bits (555), Expect = 1e-54
Identities = 104/117 (88%), Positives = 112/117 (95%)
Frame = +3
Query: 309 SFPLTIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGL 488
S PLTIESAHKKGAGSTKNGRDSRG+RLGVKIYGDQVA+PGAIIVRQRGTKFHPG NVGL
Sbjct: 43 SLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGL 102
Query: 489 GKDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
GKDHTIFSLIDGLVKFEK+GPD+KK+SVYP + QPENPNS RA+KREYFR+QRERKK
Sbjct: 103 GKDHTIFSLIDGLVKFEKFGPDRKKISVYPCVLQPENPNSCRAKKREYFRMQRERKK 159
>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
gi|223549405|gb|EEF50893.1| ribosomal protein L27,
putative [Ricinus communis]
Length = 195
Score = 216 bits (551), Expect = 4e-54
Identities = 112/161 (69%), Positives = 123/161 (76%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 VGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVS------FPLTIESAHKKGAGS 356
+ FN+ FK + +G+ L VS FPLTIE AHKKGAGS
Sbjct: 10 ISFNLIGTFKGLSLSSSSS--FFKGDTTLNLSLSRNCVSLPLKAPFPLTIEMAHKKGAGS 67
Query: 357 TKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLVKF 536
TKNGRDS G+RLGVKI+G+Q A+PGAIIVRQRGTKFHPG NVGLGKDHTIFSLIDGLVKF
Sbjct: 68 TKNGRDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKF 127
Query: 537 EKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
EK+GPD+KKVSVYPR QPENPNSYRARKREYFRLQRERKK
Sbjct: 128 EKFGPDRKKVSVYPREVQPENPNSYRARKREYFRLQRERKK 168
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 216 bits (549), Expect = 6e-54
Identities = 113/160 (70%), Positives = 127/160 (79%), Gaps = 5/160 (3%)
Frame = +3
Query: 195 VGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTA-SVSFPL----TIESAHKKGAGST 359
V F++ AFK +L+G+ +P SVSFPL TIESAHKKGAGST
Sbjct: 3 VSFSLVGAFKGLSLASSSS--FLKGDFGAAFPVAPKFSVSFPLKSPLTIESAHKKGAGST 60
Query: 360 KNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLVKFE 539
KNGRDS G+RLGVKI+GDQVA+PG+IIVRQRGTKFHPG NVGLGKDHTIFSLIDGLVKFE
Sbjct: 61 KNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFE 120
Query: 540 KYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
K+GPD+KK+SVYPR QPENPNSYR RKRE FRLQRER+K
Sbjct: 121 KFGPDRKKISVYPREVQPENPNSYRNRKRESFRLQRERRK 160
>ref|XP_004971106.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Setaria
italica]
Length = 191
Score = 214 bits (545), Expect = 2e-53
Identities = 112/166 (67%), Positives = 130/166 (78%), Gaps = 8/166 (4%)
Frame = +3
Query: 186 MATVGFNIASAFKXXXXXXXXXXX---YLRGEVRLPYPRRTASVSFP-----LTIESAHK 341
MA++ F++A AFK +L G+ R A+V P LTI+ AHK
Sbjct: 1 MASMAFSLAGAFKGLSLASPSSSMRPSFLGGD-RAALSVGGAAVGVPVPARRLTIQMAHK 59
Query: 342 KGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLID 521
KGAGSTKNGRDS+G+RLGVKIYGDQVA+PGAII+RQRGT+ +PGNNVG+GKDHT+FSLID
Sbjct: 60 KGAGSTKNGRDSKGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGNNVGMGKDHTLFSLID 119
Query: 522 GLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
GLVKFEKYGPDKKKVSVYP +QPENPNSYRARKREYFR+QRERKK
Sbjct: 120 GLVKFEKYGPDKKKVSVYPYEKQPENPNSYRARKREYFRMQRERKK 165
>ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Capsella rubella]
gi|482553263|gb|EOA17456.1| hypothetical protein
CARUB_v10005779mg [Capsella rubella]
Length = 198
Score = 214 bits (544), Expect = 2e-53
Identities = 113/168 (67%), Positives = 127/168 (75%), Gaps = 9/168 (5%)
Frame = +3
Query: 183 SMAT-VGFNIASAFKXXXXXXXXXXXYLRGEVRL--------PYPRRTASVSFPLTIESA 335
+MAT + N+ AFK +LRG++ L P + PLTIESA
Sbjct: 2 AMATSMSLNLIGAFKGLSLSSTST--FLRGDLNLCPKTTFTVTLPMQNLQAPIPLTIESA 59
Query: 336 HKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSL 515
HKKGAGSTKNGRDS G+RLGVKIYGDQVA+PGAIIVRQRGTKFH G NVG+GKDHTIFSL
Sbjct: 60 HKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSL 119
Query: 516 IDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
IDGLVKFEK+GPD+KK+SVYPR PENPNSYRARKRE FRLQRE+KK
Sbjct: 120 IDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENFRLQREKKK 167
>ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum lycopersicum]
Length = 173
Score = 213 bits (543), Expect = 3e-53
Identities = 106/123 (86%), Positives = 113/123 (91%), Gaps = 4/123 (3%)
Frame = +3
Query: 303 SVSFPL----TIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHP 470
SVSFPL TIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVA+PG+IIVRQRGTKFHP
Sbjct: 33 SVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGSIIVRQRGTKFHP 92
Query: 471 GNNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRE 650
G NVGLGKDHTIFSLIDGLVKFEK+GPD+KK+SVYPR QPENPNSYR RKRE FRLQRE
Sbjct: 93 GKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREVQPENPNSYRNRKRESFRLQRE 152
Query: 651 RKK 659
R+K
Sbjct: 153 RRK 155
>ref|XP_003522956.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Glycine max]
Length = 191
Score = 213 bits (543), Expect = 3e-53
Identities = 102/115 (88%), Positives = 111/115 (96%)
Frame = +3
Query: 315 PLTIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGK 494
PLTIE+AHKKGAGSTKNGRDS+GKRLGVKIYGDQVA+PG+IIVRQRGTKFH G NVGLGK
Sbjct: 50 PLTIENAHKKGAGSTKNGRDSQGKRLGVKIYGDQVAKPGSIIVRQRGTKFHAGKNVGLGK 109
Query: 495 DHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
D+TIFSLIDG+VKFEKYGPD+KKVSVYPR QPENPNSYRARKREYFR++RERKK
Sbjct: 110 DYTIFSLIDGVVKFEKYGPDRKKVSVYPREVQPENPNSYRARKREYFRVRRERKK 164
>gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis]
Length = 196
Score = 213 bits (542), Expect = 4e-53
Identities = 100/116 (86%), Positives = 111/116 (95%)
Frame = +3
Query: 312 FPLTIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLG 491
FPL IESAHKKGAGSTKNGRDS+G+RLGVKI+GDQVA+PG+IIVRQRGTKFH G NVGLG
Sbjct: 53 FPLIIESAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLG 112
Query: 492 KDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
KDHTIFSLIDGLVKFEK+GPD+KK+SVYPR QPENPNSYRARK+EYFR+QRER+K
Sbjct: 113 KDHTIFSLIDGLVKFEKFGPDRKKISVYPREVQPENPNSYRARKKEYFRMQRERRK 168
>ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum tuberosum]
Length = 173
Score = 213 bits (542), Expect = 4e-53
Identities = 105/123 (85%), Positives = 113/123 (91%), Gaps = 4/123 (3%)
Frame = +3
Query: 303 SVSFPL----TIESAHKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHP 470
S+SFPL TIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVA+PG+IIVRQRGTKFHP
Sbjct: 33 SISFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGSIIVRQRGTKFHP 92
Query: 471 GNNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRE 650
G NVGLGKDHTIFSLIDGLVKFEK+GPD+KK+SVYPR QPENPNSYR RKRE FRLQRE
Sbjct: 93 GKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREVQPENPNSYRNRKRESFRLQRE 152
Query: 651 RKK 659
R+K
Sbjct: 153 RRK 155
>ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine
max]
Length = 194
Score = 213 bits (542), Expect = 4e-53
Identities = 110/159 (69%), Positives = 125/159 (78%), Gaps = 4/159 (2%)
Frame = +3
Query: 195 VGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVSFP----LTIESAHKKGAGSTK 362
+ FN+A+AFK + T+ VS P LTIE+AHKKGAGSTK
Sbjct: 9 MSFNLATAFKGLSFSSSSSSFFAGSGSYSLRAGPTSVVSLPRRCPLTIENAHKKGAGSTK 68
Query: 363 NGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGLVKFEK 542
NGRDS+GKRLGVKIYGDQVA+PG+IIVRQRGTKFH G NVGLGKD+TIFSLIDG+VKFEK
Sbjct: 69 NGRDSQGKRLGVKIYGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDYTIFSLIDGVVKFEK 128
Query: 543 YGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
YGPD+KKVSVYP+ QPENPNSYRARKREYFR++RERKK
Sbjct: 129 YGPDRKKVSVYPQEVQPENPNSYRARKREYFRVRRERKK 167
>ref|XP_002456869.1| hypothetical protein SORBIDRAFT_03g044280 [Sorghum bicolor]
gi|241928844|gb|EES01989.1| hypothetical protein
SORBIDRAFT_03g044280 [Sorghum bicolor]
Length = 189
Score = 213 bits (541), Expect = 5e-53
Identities = 110/164 (67%), Positives = 130/164 (79%), Gaps = 6/164 (3%)
Frame = +3
Query: 186 MATVGFNIASAFKXXXXXXXXXXXYLRGE---VRLPYPRRTASVSFP---LTIESAHKKG 347
MA++ F +A AFK +LRG+ + + VS P LTI+ AHKKG
Sbjct: 1 MASMAFALAGAFKGLSLAPTTTS-FLRGDRVSLSVGGGSGAVGVSVPARRLTIQMAHKKG 59
Query: 348 AGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSLIDGL 527
AGSTKNGRDS+G+RLGVKIYGDQVA+PGAII+RQRGT+ +PGNNVG+GKDHT+FSLIDGL
Sbjct: 60 AGSTKNGRDSKGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGNNVGMGKDHTLFSLIDGL 119
Query: 528 VKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
VKFEKYGPDKKKVSVYP ++PENPNSYRARKREYFR++RERKK
Sbjct: 120 VKFEKYGPDKKKVSVYPYEKEPENPNSYRARKREYFRMRRERKK 163
>gb|AAM62675.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
Length = 196
Score = 213 bits (541), Expect = 5e-53
Identities = 115/168 (68%), Positives = 129/168 (76%), Gaps = 10/168 (5%)
Frame = +3
Query: 186 MAT-VGFNIASAFKXXXXXXXXXXXYLRGEVRLPYPRRTASVSFPL---------TIESA 335
MAT + N+ AFK +LRGE+ P+ T +V+ PL TIESA
Sbjct: 1 MATSMSLNLIGAFKGLSLSSTSS--FLRGELSFS-PKTTFTVTLPLENLQAPVPLTIESA 57
Query: 336 HKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSL 515
HKKGAGSTKNGRDS G+RLGVKIYGDQVA+PGAIIVRQRGTKFH G NVG+GKDHTIFSL
Sbjct: 58 HKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSL 117
Query: 516 IDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
IDGLVKFEK+GPD+KK+SVYPR PENPNSYRARKRE FRLQRE+KK
Sbjct: 118 IDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENFRLQREKKK 165
>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
Chain X, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|15028249|gb|AAK76713.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|21436345|gb|AAM51342.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
[Arabidopsis thaliana]
Length = 198
Score = 211 bits (538), Expect = 1e-52
Identities = 112/168 (66%), Positives = 126/168 (75%), Gaps = 9/168 (5%)
Frame = +3
Query: 183 SMAT-VGFNIASAFKXXXXXXXXXXXYLRGEVR--------LPYPRRTASVSFPLTIESA 335
+MAT + N+ AFK +LRG++ + P PLTIESA
Sbjct: 2 AMATSMSLNLIGAFKGLSLSSTSS--FLRGDLSFSPKTSFTVTLPLENLQAPIPLTIESA 59
Query: 336 HKKGAGSTKNGRDSRGKRLGVKIYGDQVAQPGAIIVRQRGTKFHPGNNVGLGKDHTIFSL 515
HKKGAGSTKNGRDS G+RLGVKIYGDQVA+PGAIIVRQRGTKFH G NVG+GKDHTIFSL
Sbjct: 60 HKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSL 119
Query: 516 IDGLVKFEKYGPDKKKVSVYPRIEQPENPNSYRARKREYFRLQRERKK 659
IDGLVKFEK+GPD+KK+SVYPR PENPNSYRARKRE FRLQRE+KK
Sbjct: 120 IDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENFRLQREKKK 167