BLASTX nr result
ID: Zingiber24_contig00008427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00008427
(537 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525676.1| transcription initiation factor brf1, putati... 82 1e-13
gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative is... 77 2e-12
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 75 1e-11
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 75 1e-11
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 75 1e-11
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 72 1e-10
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 70 4e-10
ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa ... 68 1e-09
ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citr... 67 3e-09
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 67 3e-09
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 66 6e-09
ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidops... 65 7e-09
gb|AAF14044.1|AC011436_28 putative transcription factor [Arabido... 65 7e-09
gb|EXC18103.1| Transcription factor IIIB 90 kDa subunit [Morus n... 64 2e-08
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 64 2e-08
ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Caps... 64 2e-08
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 64 2e-08
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 64 2e-08
ref|XP_004493225.1| PREDICTED: transcription factor IIIB 90 kDa ... 64 2e-08
ref|XP_002882615.1| RNA polymerase II transcription factor [Arab... 64 2e-08
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHA 185
AAL KSKKEK+Q+R AE KN +PA++ EA R+ML KK S+K+NY+ LE +F +
Sbjct: 493 AALAKSKKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDEPGSKD 552
Query: 186 KKQKVELDVGDPDETLDKKDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGDNDEYDYG- 362
K+ D DE + D D DD GPG K +ND+YD
Sbjct: 553 PKKLRTESESDTDEKFPQTD------DRNDDLGPG--NKNEKEEDAEAYKYNNDQYDENV 604
Query: 363 DADHDYE 383
D +DYE
Sbjct: 605 DEAYDYE 611
>gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 77.0 bits (188), Expect = 2e-12
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHA 185
A + KS+KE++Q+R AE KN P +T EA RRML +K S+K+NY+ALE +F +
Sbjct: 479 AVVAKSRKERQQKRAAEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDEPVASS 538
Query: 186 KKQKVELDVGDPDETLDK-------KDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGDN 344
+K K + + DE DK + D AD ++ + DG G +N
Sbjct: 539 EKPKKQKNESHSDEKEDKVSKIGKEEGDLADEYNDVEGDGGGTKFDNNLDF-------EN 591
Query: 345 DEYDYGDADHDYEDF 389
+ YDY D D+ Y+++
Sbjct: 592 EVYDYDD-DYGYDEY 605
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 74.7 bits (182), Expect = 1e-11
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF----SSE 173
AA+ KS+KEK+Q+R AE KN PA+T LEA RRML KK S+K+NY+ LE +F +SE
Sbjct: 489 AAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSE 548
Query: 174 QNHAKKQKVELDVGDPDETLDKKDDHADILDNKDD-DGPGAXXXXXXXXXXXXXKGDNDE 350
K+ D D KK+ ++ L + D D G + +E
Sbjct: 549 NPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANG-----------DVGEAYENE 597
Query: 351 YDYGDADHDYE 383
DYG+ D Y+
Sbjct: 598 LDYGNVDEAYD 608
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED:
transcription factor IIIB 90 kDa subunit-like isoform X1
[Citrus sinensis] gi|557545784|gb|ESR56762.1|
hypothetical protein CICLE_v10019321mg [Citrus
clementina]
Length = 620
Score = 74.7 bits (182), Expect = 1e-11
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF----SSE 173
AA+ KS+KEK+Q+R AE KN PA+T LEA RRML KK S+K+NY+ LE +F +SE
Sbjct: 491 AAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSE 550
Query: 174 QNHAKKQKVELDVGDPDETLDKKDDHADILDNKDD-DGPGAXXXXXXXXXXXXXKGDNDE 350
K+ D D KK+ ++ L + D D G + +E
Sbjct: 551 NPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANG-----------DVGEAYENE 599
Query: 351 YDYGDADHDYE 383
DYG+ D Y+
Sbjct: 600 LDYGNVDEAYD 610
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 74.7 bits (182), Expect = 1e-11
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF----SSE 173
AA+ KS+KEK+Q+R AE KN PA+T LEA RRML KK S+K+NY+ LE +F +SE
Sbjct: 414 AAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSE 473
Query: 174 QNHAKKQKVELDVGDPDETLDKKDDHADILDNKDD-DGPGAXXXXXXXXXXXXXKGDNDE 350
K+ D D KK+ ++ L + D D G + +E
Sbjct: 474 NPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANG-----------DVGEAYENE 522
Query: 351 YDYGDADHDYE 383
DYG+ D Y+
Sbjct: 523 LDYGNVDEAYD 533
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSS-EQNH 182
A L KSKKE +Q+R AE +N +PA++ EAV RML KK S+K+NY+ LE +F E
Sbjct: 380 ADLAKSKKEMQQKRAAEARNSVPAKSAAEAVHRMLTKKRISSKINYDVLEKLFEEPEAKD 439
Query: 183 AKKQKVELDVGDPDETLDKKDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGDNDEYDYG 362
AK+ + E ++ L + D ++DG G D+ YD
Sbjct: 440 AKRPRTESHPDPVEKVLHTDGKDHKLEDTNENDGLGPLDENVDDAVGEAY--DDFLYDEN 497
Query: 363 DADHDY 380
+D DY
Sbjct: 498 GSDDDY 503
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 69.7 bits (169), Expect = 4e-10
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHA 185
AA+ KS+KE++Q+R AE KN +PA+T EA R+ML KK S+K+NY+ LE +F
Sbjct: 494 AAVAKSRKERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDSVPSE 553
Query: 186 KKQKVELDVGDPDETLDKKDDHADILDNK----DDDGPGAXXXXXXXXXXXXXKGDNDEY 353
+K+ E+ + +DH + NK ++D G ND Y
Sbjct: 554 NPKKIR------TESQTENNDHKAPISNKKLEPEEDDLAPEDEFGYEGDTGGLYG-NDLY 606
Query: 354 DYG-DADHDYED 386
G D D DY D
Sbjct: 607 GEGYDYDDDYGD 618
>ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Fragaria
vesca subsp. vesca]
Length = 620
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Frame = +3
Query: 3 DAALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQ-- 176
+AA+ K KKE++ R AE KN PA+T EAV +ML KK S+K+N++ LE MF + +
Sbjct: 489 EAAVAKRKKERQLARAAEAKNSTPAQTAAEAVHQMLTKKRLSSKINFDVLEDMFETSEGP 548
Query: 177 NHAKKQKVELDVGDPDETLDKKDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGDNDEYD 356
+ +KK+K++ + D D + + KDDD ++D +
Sbjct: 549 DVSKKRKIDSHL-DNDNKMPHDSEELKYDAYKDDDLGMEQEYGDEEGLEDIGYNNHDYVE 607
Query: 357 YGDA--DHDYEDF 389
D D DY+DF
Sbjct: 608 EADEYNDRDYDDF 620
>ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|557545781|gb|ESR56759.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 567
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF 164
AA+ KS+KEK+Q+R AE KN PA+T LEA RRML KK S+K+NY+ LE +F
Sbjct: 491 AAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLF 543
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 67.0 bits (162), Expect = 3e-09
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
A++ KSKKEK+Q+R AE+KN PA+T EA ++ML KK S K+NY+ LE +F S+ +N
Sbjct: 499 ASVAKSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSAPEN 558
Query: 180 HAKKQKVELDVGDPDETLDKKDDHADILDNKDD 278
K + D DK D D +N DD
Sbjct: 559 PKKARTAYDSTDDYGVKSDKIDPEVD--ENYDD 589
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 65.9 bits (159), Expect = 6e-09
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
AA+ KS+KE++++R AE KN PA+T EA R+ML KK S+K+NY+ L+ +F S+
Sbjct: 537 AAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGME 596
Query: 180 HAKKQKVELDVGDPDETLDKKDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGD-NDEYD 356
+ K+K E + ++T + + + ++D G + N E D
Sbjct: 597 PSAKKKCEEQAEETEKTRNTTKEFETTEEQEEDYDDGYDGTYGSGLYYENMEETYNHEQD 656
Query: 357 YGDADHD 377
YG ++D
Sbjct: 657 YGYDEYD 663
>ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
gi|110741698|dbj|BAE98795.1| putative transcription
factor [Arabidopsis thaliana]
gi|332641235|gb|AEE74756.1| Cyclin/Brf1-like TBP-binding
protein [Arabidopsis thaliana]
Length = 604
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
A KS+KEK+Q++ E KN P T +EAVRR L KK S+ +NY+ LE++F S+ +
Sbjct: 469 ADAAKSRKEKQQKKAEEAKNAAPPATAVEAVRRTLDKKRLSSVINYDVLESLFDTSAPEK 528
Query: 180 HAKKQKVELDV-GDPDETLDKKDDHADILDNKDDD 281
K+ K E D+ +E + K + + +N+D+D
Sbjct: 529 SPKRSKTETDIEKKKEENKEMKSNEHENGENEDED 563
>gb|AAF14044.1|AC011436_28 putative transcription factor [Arabidopsis thaliana]
Length = 600
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
A KS+KEK+Q++ E KN P T +EAVRR L KK S+ +NY+ LE++F S+ +
Sbjct: 465 ADAAKSRKEKQQKKAEEAKNAAPPATAVEAVRRTLDKKRLSSVINYDVLESLFDTSAPEK 524
Query: 180 HAKKQKVELDV-GDPDETLDKKDDHADILDNKDDD 281
K+ K E D+ +E + K + + +N+D+D
Sbjct: 525 SPKRSKTETDIEKKKEENKEMKSNEHENGENEDED 559
>gb|EXC18103.1| Transcription factor IIIB 90 kDa subunit [Morus notabilis]
Length = 517
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = +3
Query: 15 VKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHAKKQ 194
+ + K +K+RR + N PA+T EA R+ML KK FS+K+NYEALE FS + KK
Sbjct: 387 LSAPKPRKERRQKQDPNAPPAQTAAEAARQMLSKKRFSSKINYEALEKCFSGDVGPNKKA 446
Query: 195 KVELDVGDPDETLDK----KDDHADILDNKDDDG 284
KV D D+ K + +D +D +D+ G
Sbjct: 447 KVSGQDDDEDDGSGKGPGGNEKKSDFVDKEDEIG 480
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 64.3 bits (155), Expect = 2e-08
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHA 185
AA+ K KK+K+Q+R E +N PA+T EA R+ML KK S+K+NYE L +F E+ A
Sbjct: 555 AAIAKMKKDKQQKRAEEARNATPAQTAAEATRQMLTKKKISSKINYEVLNKLF-DEETPA 613
Query: 186 KKQKVELDVGDPDETLDKK---------DDHADILDNKDDDGPGAXXXXXXXXXXXXXKG 338
K + D GD +E K D A +++D G G
Sbjct: 614 KDEGKTQD-GDAEEVPSSKRQRTKSSHGDSRAQKTKDENDRGFDTEALNDDNGYEEQHAG 672
Query: 339 DNDEYD----YGDADHDY 380
++ Y+ YG+A+ Y
Sbjct: 673 EDYGYENAQGYGNAEEGY 690
>ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Capsella rubella]
gi|482565968|gb|EOA30157.1| hypothetical protein
CARUB_v10013272mg [Capsella rubella]
Length = 600
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/95 (33%), Positives = 55/95 (57%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSEQNHA 185
A+ +S+KEK+Q++ E KN P T +EAVRR L+KK + +NY+ LE +F +
Sbjct: 469 ASKKQSRKEKQQKKAEEEKNAAPPATAMEAVRRTLVKKRLTTVINYDVLEELFDTSAGEN 528
Query: 186 KKQKVELDVGDPDETLDKKDDHADILDNKDDDGPG 290
+K + + G E ++K + +I +N+D+ G
Sbjct: 529 LPKKSKTEAGMEKEKKEEKSNEPEIGENEDEAEEG 563
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
AA+ KS+KE++++R AE KN PA+T EA R+ML KK S+K+NY+ L+ +F S+
Sbjct: 537 AAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGME 596
Query: 180 HAKKQKVELDVGDPDETLDKKDDHADILDNKDDDGPG 290
+ K+K E + ++T + + + ++D G
Sbjct: 597 PSAKKKCEEQAEETEKTRNTTKEFETTEEQEEDYDDG 633
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
A++ KSKKEK+Q+R AE+KN PA+T EA ++ML KK S K+NY+ LE +F S +N
Sbjct: 499 ASVAKSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSLPEN 558
Query: 180 HAKKQKVELDVGDPDETLDKKDDHAD 257
K + D DK D D
Sbjct: 559 PKKARTAYDSTDDYGVKSDKIDPEVD 584
>ref|XP_004493225.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Cicer
arietinum]
Length = 619
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMFSSE-QNH 182
AA+ KS+KE KQRR + KN PA++ EA +M+ K S K+N++ L +F E N
Sbjct: 485 AAVAKSRKEMKQRRAQQTKNSGPAQSAAEAACQMMKAKRLSKKINFDCLAKLFEDEPANA 544
Query: 183 AKKQKVELDVGDPDETLDKKDDHADILDNKDDDGPGAXXXXXXXXXXXXXKGDNDEYDYG 362
+KV D+ P + DK + D KDD+ A GD D ++ G
Sbjct: 545 GNPKKVRFDL--PSDNHDKFQSKVE--DQKDDELRSA---------DNFEDGDQDNFEDG 591
Query: 363 DADHD 377
D D D
Sbjct: 592 DQDWD 596
>ref|XP_002882615.1| RNA polymerase II transcription factor [Arabidopsis lyrata subsp.
lyrata] gi|297328455|gb|EFH58874.1| RNA polymerase II
transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 AALVKSKKEKKQRRIAEVKNMIPARTPLEAVRRMLMKKTFSAKVNYEALETMF--SSEQN 179
A KS+KEK+Q++ E KN P T +EAVRR L KK S +NY+ LE +F S+ +
Sbjct: 469 ADAAKSRKEKQQKKAEEAKNAAPPATAMEAVRRTLEKKRLSLVINYDVLEELFDTSTAEK 528
Query: 180 HAKKQKVELDVGDPDETLDKKDDHADILDNKDDD 281
K+ K E D+ E + + + D ++D
Sbjct: 529 SPKRSKTETDIEKKKEVKSNEHEKGENEDEAEED 562