BLASTX nr result

ID: Zingiber24_contig00007582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00007582
         (552 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838463.1| hypothetical protein AMTR_s00002p00145180 [A...    64   3e-08
ref|XP_006657977.1| PREDICTED: probable splicing factor, arginin...    63   4e-08
ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group] g...    63   4e-08
gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indi...    63   4e-08
ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...    60   5e-07
ref|XP_006849807.1| hypothetical protein AMTR_s00176p00054790 [A...    59   8e-07
ref|XP_004973753.1| PREDICTED: serine/arginine-rich splicing fac...    59   8e-07
gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indi...    59   8e-07
gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, e...    59   8e-07
ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group] g...    59   8e-07
ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223...    59   1e-06
ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219...    59   1e-06
gb|ACR36750.1| unknown [Zea mays] gi|414590933|tpg|DAA41504.1| T...    59   1e-06
gb|ACF88377.1| unknown [Zea mays] gi|414590930|tpg|DAA41501.1| T...    59   1e-06
ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea ma...    59   1e-06
ref|XP_006659519.1| PREDICTED: serine/arginine-rich splicing fac...    58   1e-06
ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indi...    58   1e-06
tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea m...    58   2e-06
tpg|DAA47770.1| TPA: LOW QUALITY PROTEIN: hypothetical protein Z...    58   2e-06

>ref|XP_006838463.1| hypothetical protein AMTR_s00002p00145180 [Amborella trichopoda]
           gi|548840969|gb|ERN01032.1| hypothetical protein
           AMTR_s00002p00145180 [Amborella trichopoda]
          Length = 254

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGR+IMVQFAKYGPNAERIHKG+I+E  PK+
Sbjct: 80  RNVDGRDIMVQFAKYGPNAERIHKGRIVEVFPKS 113


>ref|XP_006657977.1| PREDICTED: probable splicing factor, arginine/serine-rich 4-like
           isoform X1 [Oryza brachyantha]
          Length = 287

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           R VDGR IMVQFAKYGPNAERIHKG+IME VPK+
Sbjct: 80  RVVDGREIMVQFAKYGPNAERIHKGRIMETVPKS 113


>ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
           gi|33146621|dbj|BAC79909.1| putative splicing factor,
           arginine/serine-rich 2 (Splicing factor SC35) [Oryza
           sativa Japonica Group] gi|113611858|dbj|BAF22236.1|
           Os07g0623300 [Oryza sativa Japonica Group]
           gi|215687327|dbj|BAG91873.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222637485|gb|EEE67617.1| hypothetical protein
           OsJ_25178 [Oryza sativa Japonica Group]
          Length = 275

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           R VDGR IMVQFAKYGPNAERIHKGKIME VP++
Sbjct: 80  RVVDGREIMVQFAKYGPNAERIHKGKIMETVPRS 113


>gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
          Length = 271

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           R VDGR IMVQFAKYGPNAERIHKGKIME VP++
Sbjct: 80  RVVDGREIMVQFAKYGPNAERIHKGKIMETVPRS 113


>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGR IMVQFAKYGPNAERIHKG+I+E   K+
Sbjct: 80  RNVDGREIMVQFAKYGPNAERIHKGRIIETSSKS 113


>ref|XP_006849807.1| hypothetical protein AMTR_s00176p00054790 [Amborella trichopoda]
           gi|548853384|gb|ERN11388.1| hypothetical protein
           AMTR_s00176p00054790 [Amborella trichopoda]
          Length = 258

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGR IMVQFAKYGPNAE I KG+I+E+ PKT
Sbjct: 80  RNVDGREIMVQFAKYGPNAEPIKKGRIVESFPKT 113


>ref|XP_004973753.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Setaria
           italica]
          Length = 290

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNAE I KG++ EAV K+
Sbjct: 80  RNVDGRNIMVQFAKYGPNAEPIRKGRVKEAVEKS 113


>gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
          Length = 218

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR+IMVQFAKYGPNAERIHKG+I+E + K
Sbjct: 80  RTVDGRDIMVQFAKYGPNAERIHKGRIVEEISK 112


>gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 206

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR+IMVQFAKYGPNAERIHKG+I+E + K
Sbjct: 80  RTVDGRDIMVQFAKYGPNAERIHKGRIVEEISK 112


>ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
           gi|50582745|gb|AAT78815.1| putative splicing factor
           (having alternative splicing products) [Oryza sativa
           Japonica Group] gi|108708536|gb|ABF96331.1|
           Arginine/serine-rich splicing factor, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa
           Japonica Group] gi|222625042|gb|EEE59174.1| hypothetical
           protein OsJ_11097 [Oryza sativa Japonica Group]
          Length = 205

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR+IMVQFAKYGPNAERIHKG+I+E + K
Sbjct: 80  RTVDGRDIMVQFAKYGPNAERIHKGRIVEEISK 112


>ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
          Length = 283

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -2

Query: 254 VDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           VDGR I VQFAKYGPNAERIHKGKI EA PK+
Sbjct: 82  VDGREITVQFAKYGPNAERIHKGKISEAFPKS 113


>ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
          Length = 283

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -2

Query: 254 VDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           VDGR I VQFAKYGPNAERIHKGKI EA PK+
Sbjct: 82  VDGREITVQFAKYGPNAERIHKGKISEAFPKS 113


>gb|ACR36750.1| unknown [Zea mays] gi|414590933|tpg|DAA41504.1| TPA: hypothetical
           protein ZEAMMB73_776046 [Zea mays]
           gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein
           ZEAMMB73_776046 [Zea mays]
          Length = 190

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR IMVQFAKYGPNAERI+KG+IME VP+
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIMEPVPR 113


>gb|ACF88377.1| unknown [Zea mays] gi|414590930|tpg|DAA41501.1| TPA: hypothetical
           protein ZEAMMB73_776046 [Zea mays]
           gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein
           ZEAMMB73_776046 [Zea mays]
          Length = 238

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR IMVQFAKYGPNAERI+KG+IME VP+
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIMEPVPR 113


>ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
           gi|194699996|gb|ACF84082.1| unknown [Zea mays]
           gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein
           ZEAMMB73_776046 [Zea mays]
          Length = 251

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPK 162
           R VDGR IMVQFAKYGPNAERI+KG+IME VP+
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIMEPVPR 113


>ref|XP_006659519.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oryza
           brachyantha]
          Length = 293

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNAE I KG+I+E V K+
Sbjct: 80  RNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKS 113


>ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
           gi|42408182|dbj|BAD09319.1| putative splicing factor,
           arginine/serine-rich [Oryza sativa Japonica Group]
           gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa
           Japonica Group] gi|215693774|dbj|BAG88973.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215737273|dbj|BAG96202.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 289

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNAE I KG+I+E V K+
Sbjct: 80  RNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKS 113


>gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
           gi|222640763|gb|EEE68895.1| hypothetical protein
           OsJ_27729 [Oryza sativa Japonica Group]
          Length = 298

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNAE I KG+I+E V K+
Sbjct: 80  RNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKS 113


>tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
          Length = 254

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNA  IHKG++ E V K+
Sbjct: 80  RNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEKS 113


>tpg|DAA47770.1| TPA: LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_478975 [Zea
           mays]
          Length = 283

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 260 RNVDGRNIMVQFAKYGPNAERIHKGKIMEAVPKT 159
           RNVDGRNIMVQFAKYGPNA  IHKG++ E V K+
Sbjct: 107 RNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEKS 140


Top