BLASTX nr result

ID: Zingiber24_contig00007566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00007566
         (584 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882499.1| hypothetical protein ARALYDRAFT_478009 [Arab...    61   2e-07
ref|NP_566295.1| uncharacterized protein [Arabidopsis thaliana] ...    61   2e-07
ref|XP_006298817.1| hypothetical protein CARUB_v10014923mg [Caps...    59   9e-07
gb|AFK45726.1| unknown [Lotus japonicus]                               58   2e-06
gb|AFK48772.1| unknown [Medicago truncatula]                           57   3e-06
ref|XP_004984427.1| PREDICTED: uncharacterized protein LOC101778...    57   5e-06
ref|XP_002467873.1| hypothetical protein SORBIDRAFT_01g035690 [S...    57   5e-06
ref|XP_004134216.1| PREDICTED: uncharacterized protein LOC101205...    56   6e-06
ref|XP_006342807.1| PREDICTED: uncharacterized protein LOC102583...    56   8e-06

>ref|XP_002882499.1| hypothetical protein ARALYDRAFT_478009 [Arabidopsis lyrata subsp.
           lyrata] gi|297328339|gb|EFH58758.1| hypothetical protein
           ARALYDRAFT_478009 [Arabidopsis lyrata subsp. lyrata]
          Length = 128

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           G  +S IF++G P+SIHRV GSPVGVA          YYRFSIFGGD   D
Sbjct: 77  GSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYRFSIFGGDDGSD 127


>ref|NP_566295.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6728996|gb|AAF26993.1|AC016827_4 hypothetical protein
           [Arabidopsis thaliana] gi|21554737|gb|AAM63675.1|
           unknown [Arabidopsis thaliana]
           gi|32815867|gb|AAP88333.1| At3g06890 [Arabidopsis
           thaliana] gi|110743865|dbj|BAE99767.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332640952|gb|AEE74473.1| uncharacterized protein
           AT3G06890 [Arabidopsis thaliana]
          Length = 128

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           G  +S IF++G P+SIHRV GSPVGVA          YYRFSIFGGD   D
Sbjct: 77  GSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYRFSIFGGDDGSD 127


>ref|XP_006298817.1| hypothetical protein CARUB_v10014923mg [Capsella rubella]
           gi|482567526|gb|EOA31715.1| hypothetical protein
           CARUB_v10014923mg [Capsella rubella]
          Length = 126

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 29/51 (56%), Positives = 32/51 (62%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           G  +S IF++G PDSIHRV GSPVGVA          Y RFSIFGGD   D
Sbjct: 75  GSFVSAIFSTGEPDSIHRVSGSPVGVALFLVLILFLLYNRFSIFGGDDDSD 125


>gb|AFK45726.1| unknown [Lotus japonicus]
          Length = 121

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           G  +S +F++G PDSIHRV GSPVGVA          Y RFSIFGGD S +
Sbjct: 71  GSFVSSLFSTGEPDSIHRVSGSPVGVALFLILILFLLYNRFSIFGGDDSDE 121


>gb|AFK48772.1| unknown [Medicago truncatula]
          Length = 121

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 32/51 (62%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           G  +S IF++G PD+IHRV GSP GVA          Y RFSIFGGD S D
Sbjct: 71  GSFVSAIFSTGEPDTIHRVSGSPFGVALFLVLILVLLYNRFSIFGGDDSDD 121


>ref|XP_004984427.1| PREDICTED: uncharacterized protein LOC101778651 [Setaria italica]
          Length = 138

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 LSEIFA-SGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           L+++FA  GSPD++HRVGGSPVGVA          YYR S+FGGD   D
Sbjct: 89  LADVFAFGGSPDAVHRVGGSPVGVALMLLLILALLYYRSSLFGGDGGDD 137


>ref|XP_002467873.1| hypothetical protein SORBIDRAFT_01g035690 [Sorghum bicolor]
           gi|241921727|gb|EER94871.1| hypothetical protein
           SORBIDRAFT_01g035690 [Sorghum bicolor]
          Length = 130

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 LSEIFA-SGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGGDASGD 397
           L+++FA  GSPD++HRVGGSPVGVA          YYR S+FGGD   D
Sbjct: 81  LADVFAFGGSPDAVHRVGGSPVGVAFMLLLILALLYYRSSLFGGDGGDD 129


>ref|XP_004134216.1| PREDICTED: uncharacterized protein LOC101205160 [Cucumis sativus]
           gi|449513342|ref|XP_004164301.1| PREDICTED:
           uncharacterized protein LOC101230655 [Cucumis sativus]
          Length = 119

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGG-DASGD 397
           G  +S IF+SG PDSIHRV GSPVGVA          Y R SIFGG D SGD
Sbjct: 68  GSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119


>ref|XP_006342807.1| PREDICTED: uncharacterized protein LOC102583917 [Solanum tuberosum]
          Length = 119

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +2

Query: 245 GVILSEIFASGSPDSIHRVGGSPVGVAXXXXXXXXXXYYRFSIFGG-DASGD 397
           G  ++ IF++G P+SIHRV GSPVGVA          Y RFSIFGG D SGD
Sbjct: 68  GSFINTIFSTGEPNSIHRVSGSPVGVALFLALTLFLLYNRFSIFGGEDESGD 119


Top