BLASTX nr result
ID: Zingiber24_contig00007462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00007462
(1441 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group] 596 e-168
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop... 534 e-149
ref|XP_002519282.1| tex protein-relatedtranscription accessory p... 531 e-148
ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop... 531 e-148
sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch... 530 e-148
gb|EXB94381.1| 30S ribosomal protein S1 [Morus notabilis] 528 e-147
ref|XP_006841606.1| hypothetical protein AMTR_s00003p00212290 [A... 525 e-146
ref|XP_002316061.2| hypothetical protein POPTR_0010s16010g [Popu... 524 e-146
gb|EMJ23903.1| hypothetical protein PRUPE_ppa006438mg [Prunus pe... 524 e-146
ref|XP_006488790.1| PREDICTED: 30S ribosomal protein S1, chlorop... 523 e-146
ref|XP_006337988.1| PREDICTED: 30S ribosomal protein S1, chlorop... 523 e-145
ref|XP_002311368.1| hypothetical protein POPTR_0008s10050g [Popu... 522 e-145
ref|XP_004229034.1| PREDICTED: 30S ribosomal protein S1, chlorop... 521 e-145
ref|XP_006395045.1| hypothetical protein EUTSA_v10004302mg [Eutr... 520 e-145
ref|NP_001239880.1| uncharacterized protein LOC100812847 [Glycin... 516 e-144
ref|XP_006279348.1| hypothetical protein CARUB_v10012686mg [Caps... 515 e-143
ref|NP_850903.1| small subunit ribosomal protein S1 [Arabidopsis... 515 e-143
ref|XP_002874473.1| hypothetical protein ARALYDRAFT_489681 [Arab... 514 e-143
gb|EOY06826.1| 30S ribosomal protein S1, chloroplastic [Theobrom... 514 e-143
ref|XP_006349851.1| PREDICTED: 30S ribosomal protein S1, chlorop... 508 e-141
>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
Length = 415
Score = 596 bits (1537), Expect = e-168
Identities = 318/415 (76%), Positives = 336/415 (80%), Gaps = 5/415 (1%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXP-----ARPSFCPAAVIMGTYALTPDQKERQQ 1237
MASF HQ AG+RC ARPSFC AAVI GTYALT QKERQ+
Sbjct: 1 MASFVNHQFAGLRCPPLSSSPLSKPSSAASSKAPARPSFCSAAVIAGTYALTSAQKERQK 60
Query: 1236 LKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDI 1057
LKE+FEEA +RC APMEGV+FTVEDF+ ALEKYDF+SEIG+KVKGTVFMTD+NGALVDI
Sbjct: 61 LKEVFEEAYDRCRTAPMEGVAFTVEDFHSALEKYDFDSEIGTKVKGTVFMTDMNGALVDI 120
Query: 1056 AAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWE 877
AKSSAYLPVQEACI+KIKHVSEAGIYPGLVEEFVII E IQYDLAWE
Sbjct: 121 TAKSSAYLPVQEACIHKIKHVSEAGIYPGLVEEFVIIGEMNADDSLILSLRSIQYDLAWE 180
Query: 876 RCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVE 697
RCRQLQAED VAIVEGLRGFVPFSQIS+KS AEELIDKELPLKFVE
Sbjct: 181 RCRQLQAEDVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAKSTAEELIDKELPLKFVE 240
Query: 696 VDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHD 517
VDEEQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAF+DIGGINGLLHVSQISHD
Sbjct: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFVDIGGINGLLHVSQISHD 300
Query: 516 RVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQI 337
RVSDISTVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKADEMAQI
Sbjct: 301 RVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQI 360
Query: 336 FRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAED 172
FRQRIAQAEAMARADMLRFQP P SDLP EGLDL++IPPA+D
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLNSEGILGPLTSDLPAEGLDLSEIPPADD 415
>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
ribosomal protein S1, chloroplastic-like [Cucumis
sativus]
Length = 413
Score = 534 bits (1375), Expect = e-149
Identities = 280/374 (74%), Positives = 307/374 (82%)
Frame = -2
Query: 1293 AAVIMGTYALTPDQKERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIG 1114
AAVI G +P +ER +LKE+FEEA ERC NAP+EG+SFT+EDF+ ALEKYDF+SE+G
Sbjct: 41 AAVISGPIP-SPQTRERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELG 99
Query: 1113 SKVKGTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENM 934
+KVKGTVF TD NGALVDI AKSSAYLP+QEACI++IKHV EAG++PGL EEFVII EN
Sbjct: 100 TKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENE 159
Query: 933 XXXXXXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQIS 754
IQYDLAWERCRQLQAED VA+VEGLRGFVPFSQIS
Sbjct: 160 SDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS 219
Query: 753 SKSAAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGA 574
+KS AEEL+ KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGA
Sbjct: 220 TKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGA 279
Query: 573 FIDIGGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPG 394
FIDIGGINGLLHVSQISHDR+SDI+TVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPG
Sbjct: 280 FIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPG 339
Query: 393 DMIRNPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLP 214
DMIRNP LV+EKA+EMAQ FRQRIAQAEA+ARADMLRFQP P +LP
Sbjct: 340 DMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELP 399
Query: 213 EEGLDLTDIPPAED 172
EGLDL D+PPAE+
Sbjct: 400 VEGLDLNDVPPAEE 413
>ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative [Ricinus
communis] gi|223541597|gb|EEF43146.1| tex
protein-relatedtranscription accessory protein, putative
[Ricinus communis]
Length = 412
Score = 531 bits (1368), Expect = e-148
Identities = 278/361 (77%), Positives = 301/361 (83%), Gaps = 1/361 (0%)
Frame = -2
Query: 1251 KERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNG 1072
KER++LK++FE+A ERC APMEGV+FT EDF+ ALEKYDFNSEIG+ VKGTVFMTD NG
Sbjct: 52 KEREKLKQLFEDAYERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVFMTDANG 111
Query: 1071 ALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQY 892
A+VDI AKSSAYLPVQEACI+KIKHV EAGI PGL +EFVII EN IQY
Sbjct: 112 AVVDITAKSSAYLPVQEACIHKIKHVEEAGIVPGLTQEFVIIGENEADDSLILSLRAIQY 171
Query: 891 DLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEG-LRGFVPFSQISSKSAAEELIDKEL 715
DL+WERCRQLQAED VAIVEG LRGFVPFSQISSKS AEEL++KEL
Sbjct: 172 DLSWERCRQLQAEDVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISSKSTAEELLEKEL 231
Query: 714 PLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHV 535
PLKFV+VDEEQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLHV
Sbjct: 232 PLKFVDVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHV 291
Query: 534 SQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKA 355
SQISHDRVSDI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA
Sbjct: 292 SQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA 351
Query: 354 DEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAE 175
+EMAQ FRQRIAQAEAMARADMLRFQP P SD+P EGLDL+D+P AE
Sbjct: 352 EEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSDGILGPVTSDMPAEGLDLSDVPSAE 411
Query: 174 D 172
D
Sbjct: 412 D 412
>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
gi|296083203|emb|CBI22839.3| unnamed protein product
[Vitis vinifera]
Length = 410
Score = 531 bits (1367), Expect = e-148
Identities = 281/380 (73%), Positives = 303/380 (79%)
Frame = -2
Query: 1311 RPSFCPAAVIMGTYALTPDQKERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYD 1132
+PSF ++ KER +LKEMFE+A ERC AP EGVSF+ +DF AL+KYD
Sbjct: 32 KPSF--VRIVSAVAISNAQTKERLKLKEMFEDAYERCRTAPTEGVSFSADDFYSALDKYD 89
Query: 1131 FNSEIGSKVKGTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFV 952
FNSEIG+KVKGTVF TD NGALVDI AKSSAYLPV EACI+KIKHV EAGI PG+ EEFV
Sbjct: 90 FNSEIGTKVKGTVFCTDTNGALVDITAKSSAYLPVYEACIHKIKHVEEAGIVPGVREEFV 149
Query: 951 IIDENMXXXXXXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFV 772
II EN IQYDLAWERCRQLQAED VA+VEGLRGFV
Sbjct: 150 IIGENEADDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFV 209
Query: 771 PFSQISSKSAAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQS 592
PFSQISSK+ AEEL+DKELP+KFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQS
Sbjct: 210 PFSQISSKTTAEELLDKELPVKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQS 269
Query: 591 LKPYGAFIDIGGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKK 412
LKPYGAFIDIGGINGLLHVSQISHDRVSDI+TVLQPGD LKVMILSHDRERGRVSLSTKK
Sbjct: 270 LKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKK 329
Query: 411 LEPTPGDMIRNPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSP 232
LEPTPGDMIRNP LV+EKA+EMAQ FRQRIAQAEAMARADMLRFQP P
Sbjct: 330 LEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGP 389
Query: 231 FASDLPEEGLDLTDIPPAED 172
++DLP EGLDL+D+PPAED
Sbjct: 390 VSADLPAEGLDLSDVPPAED 409
>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
ribosomal protein S1 [Spinacia oleracea]
gi|170143|gb|AAA34045.1| chloroplast ribosomal protein S1
[Spinacia oleracea]
Length = 411
Score = 530 bits (1365), Expect = e-148
Identities = 282/410 (68%), Positives = 314/410 (76%), Gaps = 2/410 (0%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXP--ARPSFCPAAVIMGTYALTPDQKERQQLKE 1228
MAS A G+RC +P F P ++ +ERQ+LK+
Sbjct: 1 MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSP--IVSAVAVSNAQTRERQKLKQ 58
Query: 1227 MFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAK 1048
+FE+A ERC NAPMEGVSFT++DF+ AL+KYDFNSE+GS+VKGTVF TD NGALVDI AK
Sbjct: 59 LFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAK 118
Query: 1047 SSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCR 868
SSAYLP+ EACIY+IK+V EAGI PG+ EEFVII EN IQY+LAWERCR
Sbjct: 119 SSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCR 178
Query: 867 QLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDE 688
QLQAED VA+VEGLRGFVPFSQISSKS+AEEL++KE+PLKFVEVDE
Sbjct: 179 QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDE 238
Query: 687 EQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 508
EQSRLV+SNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 239 EQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 298
Query: 507 DISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQ 328
DI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ FRQ
Sbjct: 299 DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 358
Query: 327 RIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPA 178
RIAQAEAMARADMLRFQP P SDLP EGLDL+ +PPA
Sbjct: 359 RIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPA 408
>gb|EXB94381.1| 30S ribosomal protein S1 [Morus notabilis]
Length = 424
Score = 528 bits (1361), Expect = e-147
Identities = 275/362 (75%), Positives = 301/362 (83%)
Frame = -2
Query: 1257 DQKERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDL 1078
+ +ER++LKE+FEEA ERC APMEG+SFT++DF+ A+EKYDFNSE+G+KVKGTVF TD
Sbjct: 59 ETREREKLKELFEEAYERCRTAPMEGISFTIDDFHSAIEKYDFNSEVGTKVKGTVFCTDN 118
Query: 1077 NGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXI 898
NGALVDI AKSSAYLP+QEA I++IKHV E GI PGL EEFVII E I
Sbjct: 119 NGALVDITAKSSAYLPLQEASIHRIKHVEEVGIVPGLKEEFVIIGEYEADDSLVLSLKSI 178
Query: 897 QYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKE 718
QYDLAWERCRQLQAED VA+VEGLRGFVPFSQISSKS AEEL+DKE
Sbjct: 179 QYDLAWERCRQLQAEDVVLKGKVVGANKGGVVALVEGLRGFVPFSQISSKSTAEELLDKE 238
Query: 717 LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLH 538
LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLH
Sbjct: 239 LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLH 298
Query: 537 VSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEK 358
VSQISHDRVSDI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EK
Sbjct: 299 VSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEK 358
Query: 357 ADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPA 178
A+EMAQ FRQRIAQAEAMARADMLRFQP +P SDLP EGLDL+D+P A
Sbjct: 359 AEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSEGILAPLTSDLPAEGLDLSDVPLA 418
Query: 177 ED 172
+D
Sbjct: 419 DD 420
>ref|XP_006841606.1| hypothetical protein AMTR_s00003p00212290 [Amborella trichopoda]
gi|548843627|gb|ERN03281.1| hypothetical protein
AMTR_s00003p00212290 [Amborella trichopoda]
Length = 423
Score = 525 bits (1353), Expect = e-146
Identities = 278/375 (74%), Positives = 307/375 (81%), Gaps = 1/375 (0%)
Frame = -2
Query: 1293 AAVIMGTYALTPDQKERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIG 1114
+AV + T A T +ERQ+LK+MFEEA ERC +PMEGV+FT E+F+ AL+KYDF SEIG
Sbjct: 51 SAVAISTNAQT---RERQKLKDMFEEAFERCWTSPMEGVTFTPEEFHAALDKYDFESEIG 107
Query: 1113 SKVKGTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENM 934
SKVKG+VF TD NGAL+DI AKS+AYLPVQEACIYK+KHV+EAGI+PG+ EEFVII E
Sbjct: 108 SKVKGSVFRTDANGALIDITAKSTAYLPVQEACIYKVKHVAEAGIFPGMQEEFVIIGERE 167
Query: 933 XXXXXXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQIS 754
IQ+DLAWERCRQLQAED VA+VEGLRGFVPFSQIS
Sbjct: 168 DDDSLILSLRSIQFDLAWERCRQLQAEDVVVKGKIIGGNKGGVVAVVEGLRGFVPFSQIS 227
Query: 753 SKSAAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGA 574
+K+AAE+LIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV G+VQSLKPYGA
Sbjct: 228 TKTAAEDLIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGSVQSLKPYGA 287
Query: 573 FIDIGGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPG 394
FIDIGGINGLLHVSQISHDRVSDI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPG
Sbjct: 288 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 347
Query: 393 DMIRNPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLP 214
DMIRNP LV+EKADEMAQ FRQRIAQAEAMARADMLRFQP P S +P
Sbjct: 348 DMIRNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPQSGLTLSPEGILGPLGSGVP 407
Query: 213 -EEGLDLTDIPPAED 172
EGLDL D+PPAE+
Sbjct: 408 VGEGLDLNDVPPAEE 422
>ref|XP_002316061.2| hypothetical protein POPTR_0010s16010g [Populus trichocarpa]
gi|550329911|gb|EEF02232.2| hypothetical protein
POPTR_0010s16010g [Populus trichocarpa]
Length = 423
Score = 524 bits (1350), Expect = e-146
Identities = 285/412 (69%), Positives = 318/412 (77%), Gaps = 2/412 (0%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAVIMG-TYALTPDQ-KERQQLKE 1228
MAS A Q AG+ C ++P +V+ A++ Q KER +LKE
Sbjct: 1 MASLA-QQFAGLICPPLSSSRLTERAATFSKPKRAANSVVTAKAVAISNVQTKERHKLKE 59
Query: 1227 MFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAK 1048
+FEEA ERC AP+EGVSFT+EDF+ AL+ YD+NSEIG++VKGTVFMTD NGA VDI AK
Sbjct: 60 LFEEAYERCRTAPLEGVSFTLEDFHAALDTYDYNSEIGTRVKGTVFMTDNNGAFVDITAK 119
Query: 1047 SSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCR 868
SSAYLPVQEA I+KIK V EAGI PG+ EEFVII EN IQY+LAWERCR
Sbjct: 120 SSAYLPVQEASIHKIKRVEEAGIVPGMREEFVIIGENEADDSLILSLRSIQYELAWERCR 179
Query: 867 QLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDE 688
QLQAED VA+VEGL+GFVPFSQISSKS+AEEL+DKE+PLKFV+VDE
Sbjct: 180 QLQAEDAIVKGKVVGGNRGGVVAVVEGLQGFVPFSQISSKSSAEELLDKEVPLKFVDVDE 239
Query: 687 EQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 508
EQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 240 EQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 299
Query: 507 DISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQ 328
DISTVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMA+ FRQ
Sbjct: 300 DISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMARTFRQ 359
Query: 327 RIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAED 172
RIAQAEAMARADMLRFQP P SDLP EGLDL+D+PPA++
Sbjct: 360 RIAQAEAMARADMLRFQPESGLPLSSGGILGPNISDLPAEGLDLSDVPPADE 411
>gb|EMJ23903.1| hypothetical protein PRUPE_ppa006438mg [Prunus persica]
Length = 412
Score = 524 bits (1349), Expect = e-146
Identities = 285/410 (69%), Positives = 311/410 (75%), Gaps = 1/410 (0%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAVIMGTYALTPDQ-KERQQLKEM 1225
MAS A Q G+RC P + ++ A++ Q KER +LKE+
Sbjct: 1 MASLA-QQFTGLRCPPLSTSRLSKPSVFPKQNKMAGLLPVVSAVAISNAQTKERLKLKEL 59
Query: 1224 FEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAKS 1045
FE+A ERC APMEGVSF ++ F ALEKYDFNSEIG+KVKGTVF D GALVDI AKS
Sbjct: 60 FEDAHERCRTAPMEGVSFNLDSFYSALEKYDFNSEIGTKVKGTVFNIDNYGALVDITAKS 119
Query: 1044 SAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCRQ 865
SAYLPVQEACI+KIK V E GI PG+ EEFVII EN IQYDLAWERCRQ
Sbjct: 120 SAYLPVQEACIHKIKSVEEVGIVPGVREEFVIIGENEADDSLILSLKSIQYDLAWERCRQ 179
Query: 864 LQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDEE 685
LQAED VA+VEGLRGFVPFSQIS+KS AEEL+DKE+PLKFVEVDEE
Sbjct: 180 LQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKSTAEELLDKEIPLKFVEVDEE 239
Query: 684 QSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 505
QSRLVLSNRKAMAD+QAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD
Sbjct: 240 QSRLVLSNRKAMADNQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 299
Query: 504 ISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQR 325
I+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ FRQR
Sbjct: 300 IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQR 359
Query: 324 IAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAE 175
IAQAEAMARADMLRFQP P SDLP EGLDL+D+PPAE
Sbjct: 360 IAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPVEGLDLSDVPPAE 409
>ref|XP_006488790.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Citrus
sinensis]
Length = 414
Score = 523 bits (1348), Expect = e-146
Identities = 273/362 (75%), Positives = 298/362 (82%)
Frame = -2
Query: 1257 DQKERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDL 1078
+ +ER++L ++FEEA ERC APMEGVSFT+E+F+ ALEKYDFNSE+G+KVKGTVF TD
Sbjct: 53 ETREREELNQLFEEAYERCRTAPMEGVSFTLEEFHSALEKYDFNSELGTKVKGTVFCTDN 112
Query: 1077 NGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXI 898
GALVDI AKSSAYLP QEACI+KIKHV EAGI PGL EEFVII EN I
Sbjct: 113 RGALVDITAKSSAYLPTQEACIHKIKHVEEAGIVPGLKEEFVIIGENEADDSLVLSLRMI 172
Query: 897 QYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKE 718
QY+LAWERCRQLQ+ED VA VEGLRGFVPFSQISSKS AEEL+ K+
Sbjct: 173 QYELAWERCRQLQSEDVVVKGKVVGANKGGVVAEVEGLRGFVPFSQISSKSTAEELLGKD 232
Query: 717 LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLH 538
LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLH
Sbjct: 233 LPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLH 292
Query: 537 VSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEK 358
VSQISHDRV+DI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EK
Sbjct: 293 VSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEK 352
Query: 357 ADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPA 178
A+EMAQ FRQRIAQAEAMARADMLRFQP P + DLP +GLDLTDI PA
Sbjct: 353 AEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSPDLPADGLDLTDISPA 412
Query: 177 ED 172
+D
Sbjct: 413 DD 414
>ref|XP_006337988.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Solanum
tuberosum]
Length = 411
Score = 523 bits (1346), Expect = e-145
Identities = 275/404 (68%), Positives = 311/404 (76%), Gaps = 1/404 (0%)
Frame = -2
Query: 1380 QLAGIRCXXXXXXXXXXXXXXPARPSFCPAAVIMGTYALTPDQ-KERQQLKEMFEEARER 1204
Q G++C + P V+ + Q +ER +LKEMFE+A ER
Sbjct: 7 QFVGLKCPPISTTRLVNPSNYHHQSKQKPKIVVQAAAVVANAQTRERLKLKEMFEDAYER 66
Query: 1203 CLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAKSSAYLPVQ 1024
C PMEGV+FTV+DF+ ALEKYDF+SE+G+KVKGTVF D NGALVDI AKSSAYLP++
Sbjct: 67 CRTTPMEGVAFTVDDFHSALEKYDFDSEVGTKVKGTVFSVDANGALVDITAKSSAYLPLR 126
Query: 1023 EACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCRQLQAEDXX 844
EA ++ I+HV EAGI+PGL EEFV++ EN IQYDLAWERCRQLQAED
Sbjct: 127 EASLHTIRHVEEAGIFPGLREEFVVVGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVV 186
Query: 843 XXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDEEQSRLVLS 664
VA+VEGLRGFVPFSQIS+KS AEEL++KELPLKFVEVDEEQSRLVLS
Sbjct: 187 IKGKVVGANKGGVVALVEGLRGFVPFSQISTKSTAEELLEKELPLKFVEVDEEQSRLVLS 246
Query: 663 NRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDISTVLQP 484
NRKAMADSQAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI+TVLQP
Sbjct: 247 NRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQP 306
Query: 483 GDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQRIAQAEAM 304
GD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ FRQRIAQAEAM
Sbjct: 307 GDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAM 366
Query: 303 ARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAED 172
ARADMLRFQP P S+LPE+GLDL++IPPA+D
Sbjct: 367 ARADMLRFQPESGLTLNSDGILGPLTSELPEDGLDLSEIPPADD 410
>ref|XP_002311368.1| hypothetical protein POPTR_0008s10050g [Populus trichocarpa]
gi|118485696|gb|ABK94698.1| unknown [Populus trichocarpa]
gi|222851188|gb|EEE88735.1| hypothetical protein
POPTR_0008s10050g [Populus trichocarpa]
Length = 421
Score = 522 bits (1345), Expect = e-145
Identities = 284/411 (69%), Positives = 315/411 (76%), Gaps = 2/411 (0%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAVIMG-TYALTPDQ-KERQQLKE 1228
MAS A Q AG+RC ++P V+ A++ Q KER++LK+
Sbjct: 1 MASLA-QQFAGLRCPPISISRLTERAATFSKPKRAANFVVTAKAVAISNAQTKEREKLKQ 59
Query: 1227 MFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAK 1048
+FEEA ERC APMEGVSFTVEDF+ AL+ YDFNSEIG++VKGTVFMTD NGALVDI AK
Sbjct: 60 LFEEAYERCRTAPMEGVSFTVEDFHSALDAYDFNSEIGTRVKGTVFMTDNNGALVDITAK 119
Query: 1047 SSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCR 868
SSAYLPVQEA I++IK + EAGI PG+ EEFVII EN I Y+LAWERCR
Sbjct: 120 SSAYLPVQEASIHRIKRLEEAGIVPGMREEFVIIGENEADDSLILSLRSIHYELAWERCR 179
Query: 867 QLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDE 688
QLQAED VA+VEGLRGFVPFSQISSKS EEL+DKE PLKFV+VDE
Sbjct: 180 QLQAEDVIVKGKVVGGNKGGLVAVVEGLRGFVPFSQISSKSTPEELLDKEFPLKFVDVDE 239
Query: 687 EQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 508
EQSRL+LSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 240 EQSRLILSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 299
Query: 507 DISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQ 328
DI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ FRQ
Sbjct: 300 DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 359
Query: 327 RIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAE 175
RIAQAEAMARADMLRFQP SP SD+P EGLDL+D+ PA+
Sbjct: 360 RIAQAEAMARADMLRFQPESGLTLSSDGILSPLNSDMPAEGLDLSDVSPAD 410
>ref|XP_004229034.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Solanum
lycopersicum]
Length = 412
Score = 521 bits (1343), Expect = e-145
Identities = 272/376 (72%), Positives = 305/376 (81%), Gaps = 1/376 (0%)
Frame = -2
Query: 1296 PAAVIMGTYALTPDQ-KERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSE 1120
P VI + Q +ER +LKEMFE+A ERC PMEGV+FTV+DF+ ALEKYDF+SE
Sbjct: 36 PRIVIQAAAVIANAQTRERLKLKEMFEDAYERCRTTPMEGVAFTVDDFHSALEKYDFDSE 95
Query: 1119 IGSKVKGTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDE 940
+G+KVKGTVF D NGALVDI AKSSAYLP++EA ++ I+HV EAGI+PGL EEFV++ E
Sbjct: 96 VGTKVKGTVFSVDANGALVDITAKSSAYLPLREASLHTIRHVEEAGIFPGLREEFVVVGE 155
Query: 939 NMXXXXXXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQ 760
N IQYDLAWERCRQLQAED VA+VEGLRGFVPFSQ
Sbjct: 156 NEADDSLVLSLRSIQYDLAWERCRQLQAEDVVIKGKVVGANKGGVVALVEGLRGFVPFSQ 215
Query: 759 ISSKSAAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPY 580
IS+KS AEEL++KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV+G+VQSLKPY
Sbjct: 216 ISTKSTAEELLEKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGSVQSLKPY 275
Query: 579 GAFIDIGGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPT 400
GAFIDIGGINGLLHVSQISHDRVSDI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPT
Sbjct: 276 GAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPT 335
Query: 399 PGDMIRNPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASD 220
PGDMIRNP LV+EKA+EMAQ FRQRIAQAEAMARADMLRFQP P S+
Sbjct: 336 PGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLTSE 395
Query: 219 LPEEGLDLTDIPPAED 172
LPE+GLDL++IPPA+D
Sbjct: 396 LPEDGLDLSEIPPADD 411
>ref|XP_006395045.1| hypothetical protein EUTSA_v10004302mg [Eutrema salsugineum]
gi|557091684|gb|ESQ32331.1| hypothetical protein
EUTSA_v10004302mg [Eutrema salsugineum]
Length = 416
Score = 520 bits (1340), Expect = e-145
Identities = 282/416 (67%), Positives = 321/416 (77%), Gaps = 6/416 (1%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAV---IMGTYALTPDQ-KERQQL 1234
MAS A Q G+RC P A+V I+ A++ Q KER +L
Sbjct: 1 MASLA-QQFTGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLEL 59
Query: 1233 KEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIA 1054
K+MFE+A ERC APMEGV+FTV+DF A+E+YDFNSEIG++VKGTVF T+ NGALVDI+
Sbjct: 60 KKMFEDAYERCRTAPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTEANGALVDIS 119
Query: 1053 AKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWER 874
AKSSAYL V++ACI++IKHV EAGI PG+VEEFVII EN IQY+LAWER
Sbjct: 120 AKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENENDDSLLLSLRMIQYELAWER 179
Query: 873 CRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEV 694
CRQLQAED VA+VEGLRGFVPFSQISSK+AAEEL+DKE+PLKFVEV
Sbjct: 180 CRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLDKEIPLKFVEV 239
Query: 693 DEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 514
DEEQ++LVLSNRKA+ADSQAQLGIGSVV+G VQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 240 DEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHDR 299
Query: 513 VSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIF 334
VSDI+TVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ F
Sbjct: 300 VSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 359
Query: 333 RQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLT--DIPPAED 172
RQRIAQAEAMARADMLRFQP P SDLP++G+DLT D+PPA D
Sbjct: 360 RQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLGSDLPDDGVDLTVDDVPPAAD 415
>ref|NP_001239880.1| uncharacterized protein LOC100812847 [Glycine max]
gi|255635364|gb|ACU18035.1| unknown [Glycine max]
Length = 412
Score = 516 bits (1329), Expect = e-144
Identities = 265/360 (73%), Positives = 295/360 (81%)
Frame = -2
Query: 1251 KERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNG 1072
KER +LK++FEEA ERC NAPMEGVSFT+EDF AL+KYDF+SE+G K+KGTVF TD NG
Sbjct: 52 KERARLKKLFEEAYERCRNAPMEGVSFTIEDFTAALDKYDFDSEVGGKIKGTVFYTDNNG 111
Query: 1071 ALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQY 892
A+VDI AKSSAYLP+QEACI+++KHV EAG+ PG EEF+II EN +Q+
Sbjct: 112 AVVDITAKSSAYLPLQEACIHRVKHVEEAGLVPGFKEEFLIIGENSIDDSLVLSLRSLQF 171
Query: 891 DLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELP 712
DLAWERCRQLQAED VA +EGLRGFVP SQIS+ S EEL+DKELP
Sbjct: 172 DLAWERCRQLQAEDVTVKGKIVGVNKGGVVAELEGLRGFVPLSQISTNSNVEELLDKELP 231
Query: 711 LKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVS 532
LKFVEVDEEQSRLVLSNRKA+A +QAQLGIGSVV G+VQSLKPYGAFIDIGGINGLLHVS
Sbjct: 232 LKFVEVDEEQSRLVLSNRKAVAGNQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVS 291
Query: 531 QISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKAD 352
QISHDRV+DISTVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNP LV+EKA+
Sbjct: 292 QISHDRVTDISTVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAE 351
Query: 351 EMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLTDIPPAED 172
EMAQ FRQRIAQAEAMARADMLRFQP PF SDLPEEGLDL+++PPAE+
Sbjct: 352 EMAQTFRQRIAQAEAMARADMLRFQPESGLTISGDGILGPFTSDLPEEGLDLSEVPPAEE 411
>ref|XP_006279348.1| hypothetical protein CARUB_v10012686mg [Capsella rubella]
gi|482548040|gb|EOA12246.1| hypothetical protein
CARUB_v10012686mg [Capsella rubella]
Length = 417
Score = 515 bits (1327), Expect = e-143
Identities = 271/374 (72%), Positives = 308/374 (82%), Gaps = 3/374 (0%)
Frame = -2
Query: 1284 IMGTYALTPDQ-KERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSK 1108
I+ A++ Q KER +LK+MFE+A ERC NAPMEGV+FTV+DF A+E+YDFNSEIG++
Sbjct: 43 IVAAVAMSSGQTKERLELKKMFEDAYERCRNAPMEGVAFTVDDFAAAIEQYDFNSEIGTR 102
Query: 1107 VKGTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXX 928
VKGTVF TD NGALVDI+AKSSAYL V++ACI++IKHV EAGI PG+VEEFVII EN
Sbjct: 103 VKGTVFKTDANGALVDISAKSSAYLTVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESD 162
Query: 927 XXXXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSK 748
IQY+LAWERCRQLQAED VA+VEGLRGFVPFSQISSK
Sbjct: 163 DSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSK 222
Query: 747 SAAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFI 568
+AAEEL++KE+PLKFVEVDEEQ++LVLSNRKA+ADSQAQLGIGSVV+G VQSLKPYGAFI
Sbjct: 223 AAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFI 282
Query: 567 DIGGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDM 388
DIGGINGLLHVSQISHDRVSDI+TVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDM
Sbjct: 283 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDM 342
Query: 387 IRNPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEE 208
IRNP LV+EKA+EMAQ FRQRIAQAEAMARADMLRFQP P S+LP++
Sbjct: 343 IRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDD 402
Query: 207 GLDLT--DIPPAED 172
G+DLT DIP A D
Sbjct: 403 GVDLTVDDIPSAVD 416
>ref|NP_850903.1| small subunit ribosomal protein S1 [Arabidopsis thaliana]
gi|13877939|gb|AAK44047.1|AF370232_1 putative ribosomal
protein S1 [Arabidopsis thaliana]
gi|16649089|gb|AAL24396.1| Unknown protein [Arabidopsis
thaliana] gi|21593804|gb|AAM65771.1| ribosomal protein S1
[Arabidopsis thaliana] gi|23296539|gb|AAN13122.1|
putative ribosomal protein S1 [Arabidopsis thaliana]
gi|332006494|gb|AED93877.1| small subunit ribosomal
protein S1 [Arabidopsis thaliana]
Length = 416
Score = 515 bits (1326), Expect = e-143
Identities = 280/416 (67%), Positives = 321/416 (77%), Gaps = 6/416 (1%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAV---IMGTYALTPDQ-KERQQL 1234
MAS A Q +G+RC P A+V I+ A++ Q KER +L
Sbjct: 1 MASLA-QQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLEL 59
Query: 1233 KEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIA 1054
K+MFE+A ERC +PMEGV+FTV+DF A+E+YDFNSEIG++VKGTVF TD NGALVDI+
Sbjct: 60 KKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDIS 119
Query: 1053 AKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWER 874
AKSSAYL V++ACI++IKHV EAGI PG+VEEFVII EN IQY+LAWER
Sbjct: 120 AKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWER 179
Query: 873 CRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEV 694
CRQLQAED VA+VEGLRGFVPFSQISSK+AAEEL++KE+PLKFVEV
Sbjct: 180 CRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVEV 239
Query: 693 DEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 514
DEEQ++LVLSNRKA+ADSQAQLGIGSVV+G VQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 240 DEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHDR 299
Query: 513 VSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIF 334
VSDI+TVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ F
Sbjct: 300 VSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 359
Query: 333 RQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLT--DIPPAED 172
RQRIAQAEAMARADMLRFQP P S+LP++G+DLT DIP A D
Sbjct: 360 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSAVD 415
>ref|XP_002874473.1| hypothetical protein ARALYDRAFT_489681 [Arabidopsis lyrata subsp.
lyrata] gi|297320310|gb|EFH50732.1| hypothetical protein
ARALYDRAFT_489681 [Arabidopsis lyrata subsp. lyrata]
Length = 416
Score = 514 bits (1324), Expect = e-143
Identities = 280/416 (67%), Positives = 320/416 (76%), Gaps = 6/416 (1%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAV---IMGTYALTPDQ-KERQQL 1234
MAS A Q G+RC P A+V I+ A++ Q KER +L
Sbjct: 1 MASLA-QQFTGLRCSPLSSSSRLSRSVSKNFPQNKSASVSPTIVAAVAISSGQTKERLEL 59
Query: 1233 KEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIA 1054
K+MFE+A ERC APMEGV+F+V+DF A+E+YDFNSEIG++VKGTVF TD NGALVDI+
Sbjct: 60 KKMFEDAYERCRTAPMEGVAFSVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDIS 119
Query: 1053 AKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWER 874
AKSSAYL V++ACI++IKHV EAGI PG+VEEFVII EN IQY+LAWER
Sbjct: 120 AKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWER 179
Query: 873 CRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEV 694
CRQLQAED VA+VEGLRGFVPFSQISSK+AAEEL++KE+PLKFVEV
Sbjct: 180 CRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVEV 239
Query: 693 DEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 514
DEEQ++LVLSNRKA+ADSQAQLGIGSVV+G VQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 240 DEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHDR 299
Query: 513 VSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIF 334
VSDI+TVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNP LV+EKA+EMAQ F
Sbjct: 300 VSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 359
Query: 333 RQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGLDLT--DIPPAED 172
RQRIAQAEAMARADMLRFQP P S+LP++G+DLT DIP A D
Sbjct: 360 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSAVD 415
>gb|EOY06826.1| 30S ribosomal protein S1, chloroplastic [Theobroma cacao]
Length = 443
Score = 514 bits (1323), Expect = e-143
Identities = 278/398 (69%), Positives = 300/398 (75%)
Frame = -2
Query: 1401 MASFAPHQLAGIRCXXXXXXXXXXXXXXPARPSFCPAAVIMGTYALTPDQKERQQLKEMF 1222
MAS A Q G+RC R + ++ K R +LK+MF
Sbjct: 1 MASLA-QQFTGLRCPPLSSSGLSMKPKQTQRVGAFASPIVSSVAISNAQTKGRLELKKMF 59
Query: 1221 EEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVKGTVFMTDLNGALVDIAAKSS 1042
EEA ERC APMEGVSFT+EDF ALEKYDF+SE+G+KVKGTVF TD NGALVDI AKSS
Sbjct: 60 EEAYERCRTAPMEGVSFTLEDFQNALEKYDFDSELGTKVKGTVFSTDANGALVDITAKSS 119
Query: 1041 AYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXXXXXXXXXIQYDLAWERCRQL 862
AYLPVQEACI+KIKHV EAGI PGL EEFVII E IQ++LAWERCRQL
Sbjct: 120 AYLPVQEACIHKIKHVEEAGIVPGLREEFVIIGEIEADDSLVLSLRSIQFELAWERCRQL 179
Query: 861 QAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSAAEELIDKELPLKFVEVDEEQ 682
QAED VA+VEGLRGFVPFSQISSK+ AEEL+DKE+PLKFVEVDEEQ
Sbjct: 180 QAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKEIPLKFVEVDEEQ 239
Query: 681 SRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 502
SRLVLSNRKAMADSQAQLGIGSVV+G VQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 240 SRLVLSNRKAMADSQAQLGIGSVVLGNVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 299
Query: 501 STVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVYEKADEMAQIFRQRI 322
+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLV+EKA+EMAQ FRQRI
Sbjct: 300 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRI 359
Query: 321 AQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEE 208
AQAEAMARADMLRFQP P SDLP E
Sbjct: 360 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAE 397
>ref|XP_006349851.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Solanum
tuberosum]
Length = 415
Score = 508 bits (1308), Expect = e-141
Identities = 267/370 (72%), Positives = 297/370 (80%), Gaps = 1/370 (0%)
Frame = -2
Query: 1278 GTYALTPDQ-KERQQLKEMFEEARERCLNAPMEGVSFTVEDFNEALEKYDFNSEIGSKVK 1102
G A T Q +ER +LKEMFEEA ERC APMEGV+FTVEDF+ ALEKYDF+SE+G+KVK
Sbjct: 45 GAVATTNAQTRERIKLKEMFEEAYERCRTAPMEGVAFTVEDFHSALEKYDFDSELGTKVK 104
Query: 1101 GTVFMTDLNGALVDIAAKSSAYLPVQEACIYKIKHVSEAGIYPGLVEEFVIIDENMXXXX 922
GTVF D NGALV+I AKSSAYLP+QEA IY IKHV EAGI+PG +EFV+I EN
Sbjct: 105 GTVFSVDANGALVEITAKSSAYLPIQEASIYSIKHVEEAGIFPGFRDEFVVIGENEADDS 164
Query: 921 XXXXXXXIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXVAIVEGLRGFVPFSQISSKSA 742
IQYDLAWERCRQLQAED VA+VEGLRGF+PFSQI SKS
Sbjct: 165 VILSLRSIQYDLAWERCRQLQAEDVVVKGKVVSANKGGVVALVEGLRGFIPFSQIFSKST 224
Query: 741 AEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVVGTVQSLKPYGAFIDI 562
AEEL++KELPLKFVEVD+EQ+RL+LSNRKAMADSQ QLGIGSVV+GTVQSLKPYGAFIDI
Sbjct: 225 AEELLEKELPLKFVEVDQEQTRLILSNRKAMADSQTQLGIGSVVLGTVQSLKPYGAFIDI 284
Query: 561 GGINGLLHVSQISHDRVSDISTVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 382
GG+NGLLHVSQISHDRVSDI TVLQPGD+LKVMILSHDRERGRVSLSTKKLEP PGDMIR
Sbjct: 285 GGVNGLLHVSQISHDRVSDIVTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPAPGDMIR 344
Query: 381 NPTLVYEKADEMAQIFRQRIAQAEAMARADMLRFQPXXXXXXXXXXXXSPFASDLPEEGL 202
NP LV+EKA+EMAQ FRQRI+QAEAMARAD+L+FQP P S+LP EGL
Sbjct: 345 NPKLVFEKAEEMAQTFRQRISQAEAMARADILKFQPESGLTLNSDGILGPLTSELPAEGL 404
Query: 201 DLTDIPPAED 172
DL+ I PAE+
Sbjct: 405 DLSVIFPAEE 414