BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00007249
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]                136   3e-30
gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indi...   136   3e-30
ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group] g...   136   3e-30
ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-lik...   136   3e-30
ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-lik...   133   3e-29
gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis]        132   4e-29
gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japo...   132   6e-29
dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]    131   1e-28
emb|CBI37183.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   130   1e-28
gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii]      130   2e-28
gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays] g...   130   2e-28
gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays]        130   2e-28
ref|XP_004985249.1| PREDICTED: pre-mRNA-processing factor 39-lik...   128   9e-28
gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily p...   128   9e-28
ref|XP_004292243.1| PREDICTED: pre-mRNA-processing factor 39-lik...   127   1e-27
gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus pe...   127   2e-27
ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [S...   127   2e-27
ref|XP_004140574.1| PREDICTED: pre-mRNA-processing factor 39-lik...   126   3e-27
gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus...   125   6e-27

>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
          Length = 823

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/94 (68%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
 Frame = -2

Query: 270 KVMEFDTGGAAIEHVYG----DVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAEND 103
           +V+E+ +  A  +   G    + VYSAEEERLWN V++NCLDFNAWT+LI+ETEKVAE +
Sbjct: 126 EVVEYGSASAVPDAHAGAQHFEEVYSAEEERLWNAVRINCLDFNAWTALIEETEKVAETN 185

Query: 102 IIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           I+KIRKVYDAFL EFPLC+GYWKKYADHE RLDS
Sbjct: 186 ILKIRKVYDAFLVEFPLCFGYWKKYADHEARLDS 219


>gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indica Group]
          Length = 789

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 13/103 (12%)
 Frame = -2

Query: 273 GKVMEFDTGGAAI-------------EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLI 133
           G+V+++ + GAA              E  Y D V SAEE RLWN V  NCLDFNAWT+LI
Sbjct: 85  GQVVDYQSAGAAENGAATNEMGEPVPEQSYADAVLSAEEARLWNAVTANCLDFNAWTALI 144

Query: 132 DETEKVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           DETEK AE++I+K+RKVYDAFLAEFPLC+GYWKKYADHE RLD
Sbjct: 145 DETEKTAESNILKLRKVYDAFLAEFPLCFGYWKKYADHEARLD 187


>ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group]
           gi|108706795|gb|ABF94590.1| Pre-mRNA processing protein
           prp39, putative, expressed [Oryza sativa Japonica Group]
           gi|113547811|dbj|BAF11254.1| Os03g0210400 [Oryza sativa
           Japonica Group]
          Length = 789

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 13/103 (12%)
 Frame = -2

Query: 273 GKVMEFDTGGAAI-------------EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLI 133
           G+V+++ + GAA              E  Y D V SAEE RLWN V  NCLDFNAWT+LI
Sbjct: 85  GQVVDYQSAGAAENGAATNEMGEPVPEQSYADAVLSAEEARLWNAVTANCLDFNAWTALI 144

Query: 132 DETEKVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           DETEK AE++I+K+RKVYDAFLAEFPLC+GYWKKYADHE RLD
Sbjct: 145 DETEKTAESNILKLRKVYDAFLAEFPLCFGYWKKYADHEARLD 187


>ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-like [Oryza brachyantha]
          Length = 722

 Score =  136 bits (342), Expect = 3e-30
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = -2

Query: 234 EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAFLAEFP 55
           E +Y D V SAEE RLWN V  NCLDFNAWT+LIDETEK+AE++I+K+RKVYDAFLAEFP
Sbjct: 40  EQLYEDAVLSAEEARLWNAVTANCLDFNAWTALIDETEKIAESNILKLRKVYDAFLAEFP 99

Query: 54  LCYGYWKKYADHEGRLD 4
           LC+GYWKKYADHE RLD
Sbjct: 100 LCFGYWKKYADHEARLD 116


>ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-like [Brachypodium
           distachyon]
          Length = 724

 Score =  133 bits (334), Expect = 3e-29
 Identities = 59/79 (74%), Positives = 70/79 (88%)
 Frame = -2

Query: 240 AIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAFLAE 61
           A E  Y D V SAEE RLW++V  +CLDFNAWT+LIDETE++AE++I+K+RKVYDAFLAE
Sbjct: 41  APEQSYEDAVVSAEEARLWSVVTADCLDFNAWTALIDETERIAESNILKMRKVYDAFLAE 100

Query: 60  FPLCYGYWKKYADHEGRLD 4
           FPLC+GYWKKYADHEGRLD
Sbjct: 101 FPLCFGYWKKYADHEGRLD 119


>gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis]
          Length = 934

 Score =  132 bits (333), Expect = 4e-29
 Identities = 66/92 (71%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 GKVMEFDTGGAAIEHVYGD-VVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDII 97
           G V E + GGA  E  Y D  V S EEERLWN+V+ N LDFN WT+LI+ETEKVAEN+I+
Sbjct: 247 GSVSE-NAGGAVDEQQYVDGSVMSTEEERLWNIVKANSLDFNTWTALIEETEKVAENNIL 305

Query: 96  KIRKVYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           KIRKVYDAFLAEFPLCYGYWKKYADHE  L S
Sbjct: 306 KIRKVYDAFLAEFPLCYGYWKKYADHEAHLGS 337


>gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japonica Group]
          Length = 789

 Score =  132 bits (331), Expect = 6e-29
 Identities = 64/103 (62%), Positives = 75/103 (72%), Gaps = 13/103 (12%)
 Frame = -2

Query: 273 GKVMEFDTGGAAI-------------EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLI 133
           G+V+++ + GAA              E  Y D V SAEE RLWN V  NCLDFNAWT+LI
Sbjct: 85  GQVVDYQSAGAAENGAATNEMGEPVPEQSYADAVLSAEEARLWNAVTANCLDFNAWTALI 144

Query: 132 DETEKVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           DETEK AE++I+K+RKVYDAFLAEFPL +GYWKKYADHE RLD
Sbjct: 145 DETEKTAESNILKLRKVYDAFLAEFPLGFGYWKKYADHEARLD 187


>dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  131 bits (329), Expect = 1e-28
 Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 4/88 (4%)
 Frame = -2

Query: 255 DTGGAAI----EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIR 88
           + GGAA     E  Y D + SAEE RLW +V  +CLDF+AWT+LI+ETE++AE++I+KIR
Sbjct: 121 ENGGAADPMVPEQAYEDAMASAEEARLWGVVTADCLDFDAWTALIEETERIAESNIVKIR 180

Query: 87  KVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           KVYDAFLAEFPLC+GYWKKYADHEGRLD
Sbjct: 181 KVYDAFLAEFPLCFGYWKKYADHEGRLD 208


>emb|CBI37183.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  130 bits (328), Expect = 1e-28
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 DTGGAAIEHVY--GDV-VYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRK 85
           D GGAA+E  +  G V   SAEE+RLW++V+ N LDFNAWT+LI+ETEK+AE++I+KIR+
Sbjct: 59  DVGGAAVEPQFEEGSVPAMSAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNILKIRR 118

Query: 84  VYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           VYDAFLAEFPLCYGYWKKYADHE RL S
Sbjct: 119 VYDAFLAEFPLCYGYWKKYADHEARLGS 146


>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  130 bits (328), Expect = 1e-28
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 DTGGAAIEHVY--GDV-VYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRK 85
           D GGAA+E  +  G V   SAEE+RLW++V+ N LDFNAWT+LI+ETEK+AE++I+KIR+
Sbjct: 137 DVGGAAVEPQFEEGSVPAMSAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNILKIRR 196

Query: 84  VYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           VYDAFLAEFPLCYGYWKKYADHE RL S
Sbjct: 197 VYDAFLAEFPLCYGYWKKYADHEARLGS 224


>gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii]
          Length = 692

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = -2

Query: 234 EHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAFLAEFP 55
           E  Y D V SAEE RLW++V  +CLDF+AWT+LI+ETE++AE++I+KIRKVYDAFLAEFP
Sbjct: 8   EQSYEDAVASAEEARLWDVVTADCLDFDAWTALIEETERIAESNILKIRKVYDAFLAEFP 67

Query: 54  LCYGYWKKYADHEGRLD 4
           LC+GYWKKYADHEGRLD
Sbjct: 68  LCFGYWKKYADHEGRLD 84


>gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
           gi|413956611|gb|AFW89260.1| hypothetical protein
           ZEAMMB73_782851 [Zea mays]
          Length = 407

 Score =  130 bits (326), Expect = 2e-28
 Identities = 59/84 (70%), Positives = 68/84 (80%)
 Frame = -2

Query: 255 DTGGAAIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYD 76
           + G    E  Y + V SAEE RLW++V  NCLDFNAWT+LI+ETEK AENDI+KIRKVYD
Sbjct: 82  EIGEPVPEPSYEEAVLSAEEARLWSVVTANCLDFNAWTTLIEETEKNAENDILKIRKVYD 141

Query: 75  AFLAEFPLCYGYWKKYADHEGRLD 4
           +FL EFPLC+GYWKKYADHE RLD
Sbjct: 142 SFLTEFPLCFGYWKKYADHEARLD 165


>gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
          Length = 763

 Score =  130 bits (326), Expect = 2e-28
 Identities = 59/84 (70%), Positives = 68/84 (80%)
 Frame = -2

Query: 255 DTGGAAIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYD 76
           + G    E  Y + V SAEE RLW++V  NCLDFNAWT+LI+ETEK AENDI+KIRKVYD
Sbjct: 82  EIGEPVPEPSYEEAVLSAEEARLWSVVTANCLDFNAWTTLIEETEKNAENDILKIRKVYD 141

Query: 75  AFLAEFPLCYGYWKKYADHEGRLD 4
           +FL EFPLC+GYWKKYADHE RLD
Sbjct: 142 SFLTEFPLCFGYWKKYADHEARLD 165


>ref|XP_004985249.1| PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Setaria
           italica] gi|514821135|ref|XP_004985250.1| PREDICTED:
           pre-mRNA-processing factor 39-like isoform X2 [Setaria
           italica]
          Length = 771

 Score =  128 bits (321), Expect = 9e-28
 Identities = 60/90 (66%), Positives = 70/90 (77%)
 Frame = -2

Query: 273 GKVMEFDTGGAAIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIK 94
           G  +  + G    E  Y +   SAEE RLW++V  N LDFNAWT+LIDETEK AE++I+K
Sbjct: 85  GAAVTNEMGEPVPEPSYEEAAVSAEEARLWSVVTANSLDFNAWTTLIDETEKNAESNILK 144

Query: 93  IRKVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           IRKVYDAFLAEFPLC+GYWKKYADHEGRLD
Sbjct: 145 IRKVYDAFLAEFPLCFGYWKKYADHEGRLD 174


>gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508702431|gb|EOX94327.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 815

 Score =  128 bits (321), Expect = 9e-28
 Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -2

Query: 243 AAIEHVYGDVV-YSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAFL 67
           AA E V G V   S EEERLW++V+ N LDFNAWT+L++ETEKVAEN+I+KIRKVYDAFL
Sbjct: 128 AAPEFVDGSVPPMSGEEERLWSIVRANSLDFNAWTTLVEETEKVAENNILKIRKVYDAFL 187

Query: 66  AEFPLCYGYWKKYADHEGRLDS 1
           AEFPLCYGYWKKYADHE R+ S
Sbjct: 188 AEFPLCYGYWKKYADHEARIGS 209


>ref|XP_004292243.1| PREDICTED: pre-mRNA-processing factor 39-like [Fragaria vesca
           subsp. vesca]
          Length = 805

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/80 (72%), Positives = 67/80 (83%)
 Frame = -2

Query: 249 GGAAIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAF 70
           G    + V      SAEE+RLWN+V+VN LDFNAWT+LI+ETEKVAE++I+KIRKVYDAF
Sbjct: 136 GSVDTQQVVDGSAMSAEEDRLWNIVRVNSLDFNAWTALIEETEKVAEDNILKIRKVYDAF 195

Query: 69  LAEFPLCYGYWKKYADHEGR 10
           LAEFPLCYGYWKKYADHE R
Sbjct: 196 LAEFPLCYGYWKKYADHEAR 215


>gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus persica]
          Length = 823

 Score =  127 bits (318), Expect = 2e-27
 Identities = 64/100 (64%), Positives = 75/100 (75%), Gaps = 9/100 (9%)
 Frame = -2

Query: 273 GKVMEFDTGGAAIEHVYGDV---------VYSAEEERLWNLVQVNCLDFNAWTSLIDETE 121
           G V   D G A  ++V G V           SAEEERLWN+V+ + LDFNAWT+LI+ETE
Sbjct: 115 GTVSSVDNGDAT-DNVAGSVDVQQFGDGSAMSAEEERLWNIVRADSLDFNAWTALIEETE 173

Query: 120 KVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           KVAE++I+KI+KVYDAFLAEFPLCYGYWKKYADHE RL S
Sbjct: 174 KVAEDNILKIQKVYDAFLAEFPLCYGYWKKYADHEARLGS 213


>ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor]
           gi|241919515|gb|EER92659.1| hypothetical protein
           SORBIDRAFT_01g043300 [Sorghum bicolor]
          Length = 768

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -2

Query: 273 GKVMEFDTGGAAIEHVYGDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIK 94
           G+ +  + G    E  Y + V SAEE RLW +V  N LDFNAWT+LI+ETEK AEN+I+K
Sbjct: 76  GEAVTNEMGEPVPEPSYEEAVLSAEEARLWTVVTANSLDFNAWTALIEETEKNAENNILK 135

Query: 93  IRKVYDAFLAEFPLCYGYWKKYADHEGRLD 4
           IRKVYD+FLAEFPLC+GYWKKYADHE RLD
Sbjct: 136 IRKVYDSFLAEFPLCFGYWKKYADHEARLD 165


>ref|XP_004140574.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
           gi|449487353|ref|XP_004157584.1| PREDICTED:
           pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 831

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/93 (65%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = -2

Query: 273 GKVMEFDTGGAAIEHVYGDVV--YSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDI 100
           G V+E    G   +H     V   SAEE+RLWN+V+ N LDFN+WTSLI+ETEKVAE++I
Sbjct: 133 GTVVENANEGPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNI 192

Query: 99  IKIRKVYDAFLAEFPLCYGYWKKYADHEGRLDS 1
           +KIR+VYDAFLAEFPLCYGYWKKYADHE R  S
Sbjct: 193 LKIRRVYDAFLAEFPLCYGYWKKYADHEARFGS 225


>gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus vulgaris]
          Length = 828

 Score =  125 bits (314), Expect = 6e-27
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = -2

Query: 222 GDVVYSAEEERLWNLVQVNCLDFNAWTSLIDETEKVAENDIIKIRKVYDAFLAEFPLCYG 43
           G    SAEE+RLWN+V+ N LDF+AWTSLI+ETEKVAE++I+KIR+VYD+FLAEFPLCYG
Sbjct: 154 GYAALSAEEDRLWNIVRANSLDFSAWTSLIEETEKVAEDNILKIRRVYDSFLAEFPLCYG 213

Query: 42  YWKKYADHEGRLDS 1
           YWKKYADHE RL S
Sbjct: 214 YWKKYADHEARLGS 227