BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00007158
         (2705 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   738   0.0  
gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticu...   736   0.0  
ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843...   734   0.0  
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   733   0.0  
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              733   0.0  
gb|EOY02123.1| Phytochrome and flowering time regulatory protein...   733   0.0  
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   731   0.0  
ref|XP_004956526.1| PREDICTED: mediator of RNA polymerase II tra...   731   0.0  
gb|EOY02124.1| Phytochrome and flowering time regulatory protein...   717   0.0  
dbj|BAD36509.1| putative SMA-9 class B [Oryza sativa Japonica Gr...   704   0.0  
tpg|DAA39874.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea m...   699   0.0  
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   696   0.0  
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   693   0.0  
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...   684   0.0  
gb|EEC84311.1| hypothetical protein OsI_30806 [Oryza sativa Indi...   683   0.0  
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...   682   0.0  
tpg|DAA39875.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea m...   681   0.0  
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus...   675   0.0  
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra...   673   0.0  
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   672   0.0  

>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  738 bits (1904), Expect = 0.0
 Identities = 417/695 (60%), Positives = 491/695 (70%), Gaps = 41/695 (5%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            M+EKQLIV VEGTAA+GPYWQ+I++DYL+KIIRC+  NEL GQK S +N EL+LV FNTH
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWTKD+DIFL WLST+ F+GGGF++AAIAEGLSEALMMF V+ N S N 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAASN              +L+  EN E Q ES L+DAETVAKSF QC 
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQLPKL +IYN  K+NPRAADP VD+ +NP FLVL+SE F+EA AALSR  +
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             N +  NQ   K+D +   S++G   T+ PSVNG  + R PI+VG++PTATVKVEP TV+
Sbjct: 241  ANLA-PNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVT 297

Query: 909  SMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            SMV+GP F H+ S++    Q V             EM  + D+  E+KPL++ +SQPLR 
Sbjct: 298  SMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRP 357

Query: 1086 AVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMA----- 1187
              PA ANVNILN +SQ R                     TP+A+HMSNMISSGMA     
Sbjct: 358  MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417

Query: 1188 -----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPP---TLMG 1343
                 SSA S I+S+ GSG     SQV QNS L S  S  SNL GNS+  I     TL G
Sbjct: 418  SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477

Query: 1344 LSASNVGQGTLT---SGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QSG 1508
             ++     G      SG Q+ Q GI++NQNM++ L  S VSSG GTMIPTPGMSQ  QSG
Sbjct: 478  GASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSG 537

Query: 1509 SHSLEVANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQT 1685
               L V NN A+NM L+QQ  + +  SQSKYVK+WEGSLSGQRQG PVFI KLEGYRS +
Sbjct: 538  MQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSAS 597

Query: 1686 ASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQ 1865
            AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAVIQ
Sbjct: 598  ASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQ 657

Query: 1866 LPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            LPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 658  LPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 692


>gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticum aestivum]
          Length = 759

 Score =  736 bits (1900), Expect = 0.0
 Identities = 404/675 (59%), Positives = 485/675 (71%), Gaps = 24/675 (3%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            +E+QL+VVVEGTAALGPYW  I  +Y++KI+R +   EL+GQKL+G  PELALVVF+THG
Sbjct: 7    SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F+VQRSGWTKD+D FL WLS + FSGGGFSEAAI EGL+EALM+   S ++S NHQ
Sbjct: 67   PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSSSSSQNHQ 126

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              E+QKHC+LVAASN              S +HK++ E   ES LADAE VA SF+QC V
Sbjct: 127  NRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAEAVAVSFAQCSV 186

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSV+SPKQLP L++IYN GK+NP+A+DPSVDH +NP FLVLLSE+F+EA  ALS   LP
Sbjct: 187  SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHP-LP 245

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
               + N  I K+D + A ++ G P+ A+PSVNGTMM RQ       PTA VKVEP T+  
Sbjct: 246  GNLVPNHTITKMDTTPAATVPGPPSNASPSVNGTMMGRQ-------PTANVKVEPTTIPP 298

Query: 912  MVSGPGFSHVSSITNV-PQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            MVS P FSH++ I+NV  Q V             E N   +  QE KPL+NP+ Q +R  
Sbjct: 299  MVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPG 358

Query: 1089 VPAPANVNILNTISQHR---------------TPVAVHMSNMISSGMASSAHSTISSVPG 1223
               PANV+ILN +SQHR               TP+ VHMSNMISSGM S+  + ISS+ G
Sbjct: 359  --GPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTP-AVISSISG 415

Query: 1224 SGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--------MGLSASNVGQGTLT 1379
            +  P+   Q+AQN+ LGS  S  S +  NS+I +  +L        MG S  ++ QG L 
Sbjct: 416  TVQPIGAQQLAQNTALGSFGSNTSTVSCNSNIAVSSSLANIQSNMAMGQSVPSMAQGGLM 475

Query: 1380 SGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIAINMPLA 1559
            +G Q  Q GI  NQNMINNL +++++S P TM+PTPGM QQ+G ++L   N+ A+NMPLA
Sbjct: 476  AGPQSGQGGIGTNQNMINNLGTTAINSTP-TMMPTPGMVQQTGVNALSANNSSAMNMPLA 534

Query: 1560 QQAPNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPAMQIVRL 1739
            Q  PN QQ  SKYVKIWEG+LSGQRQG PVFICKLEGYRS TAS +LA+DWP  MQIVRL
Sbjct: 535  QH-PNGQQ-PSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASGTLASDWPETMQIVRL 592

Query: 1740 IAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLI 1919
            IAQ+HMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLI
Sbjct: 593  IAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLI 652

Query: 1920 GMLFPGDMVVFKPQV 1964
            GMLFPGDMVVFKPQV
Sbjct: 653  GMLFPGDMVVFKPQV 667


>ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
            distachyon]
          Length = 771

 Score =  734 bits (1896), Expect = 0.0
 Identities = 408/678 (60%), Positives = 487/678 (71%), Gaps = 27/678 (3%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            AE+QL+VVVEGTAALGPYW TI  +Y++KI+R +   +L+GQKL+G  PELALVVF+THG
Sbjct: 7    AERQLVVVVEGTAALGPYWHTIAAEYVEKIVRSFCAAQLSGQKLAGVPPELALVVFHTHG 66

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ FVVQRSGWTKD+D FL WLS + FSGGGFSEAAI EGL+EALM+   S + + NHQ
Sbjct: 67   PYSAFVVQRSGWTKDMDTFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPSNNQNHQ 126

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              E+QKHC+LVAASN              S +HK+N EV  ES LADAE VA SFSQC V
Sbjct: 127  NHELQKHCVLVAASNPYPLPTPVYRPFVQSGDHKKNNEVTKESCLADAEAVAISFSQCCV 186

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSV+SPKQLP L++IYN GK+NP+A+DPSVDHV+NP FLVLLSE+F+EA  ALS    P
Sbjct: 187  SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHVKNPHFLVLLSESFMEARTALSHP-SP 245

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
               + NQ I K+D + A ++ G  + ANPSVNG+MM RQ       PTA +KVEP  ++ 
Sbjct: 246  GNLVPNQIITKMDIAPAATVPGPTSNANPSVNGSMMGRQ-------PTANIKVEPTIITP 298

Query: 912  MVSGPGFSHVSSITNV-PQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            MVS P FSH++ I+NV  Q V             E N   +  QE KPL+NP+ Q +R  
Sbjct: 299  MVSAPAFSHMTPISNVTSQGVSALQSSSPSIISQETNVANEILQEHKPLVNPIQQQVRPG 358

Query: 1089 VPAPANVNILNTISQHR---------------TPVAVHMSNMISSGMASSAHSTISSVPG 1223
               PANV+ILN +SQHR               TP+ VHMSNMISSGM S+  S ISS+ G
Sbjct: 359  --GPANVSILNNLSQHRHSLSGATSMGPNMGATPIQVHMSNMISSGMTSTP-SVISSMSG 415

Query: 1224 SGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTLMGL--------SASNVGQGTLT 1379
            +  P    Q+ QN+ LGS  S NS + GNS++ +  +L  +        S   + QG L 
Sbjct: 416  TVQPTGAQQLVQNTALGSFGSNNSTVSGNSNVAVSSSLANIQNNIATAQSVPPMAQGGLM 475

Query: 1380 S---GAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIAINM 1550
            S   G+Q  Q GI  NQNMI++L  +++SS P  M+PTPGM+QQ+G +SL V N+ A+NM
Sbjct: 476  SGSHGSQSGQGGIGTNQNMISSLGPTAISSAP-AMMPTPGMTQQAGVNSLSVNNSSAMNM 534

Query: 1551 PLAQQAPNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPAMQI 1730
            P+ QQ PN QQ QSKYVKIWEG+LSGQRQG PVFICKLEGYRS TASD+LAADWP  MQI
Sbjct: 535  PMPQQ-PNGQQ-QSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASDTLAADWPETMQI 592

Query: 1731 VRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAG 1910
            VRLIAQ+HMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAG
Sbjct: 593  VRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAG 652

Query: 1911 RLIGMLFPGDMVVFKPQV 1964
            RLIGMLFPGDMVVFKPQV
Sbjct: 653  RLIGMLFPGDMVVFKPQV 670


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  733 bits (1893), Expect = 0.0
 Identities = 407/695 (58%), Positives = 490/695 (70%), Gaps = 43/695 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQL+V VEGTAA+GPYWQ +++DYLDKIIR + GNEL GQK S +N EL+LV+FN H
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWT+D+D+FLQWLS + F+GGGF++AAIAEGL+EALMMF V+ N S   
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAA+N              ++E  E+ E QTES L+DAE VAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQLPKL+SIYN GK+NPR ADP VD+V+NP FLVL+S++F+EA AALSR  L
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             N + +NQ   K+D +S   +S  P  + PSVNG +M R  I VG++PTATVKVEP TV+
Sbjct: 241  SNMT-ANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVT 298

Query: 909  SMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            S+ SGPGF H+ S+     Q V             EM +N D  Q++KP+++ +SQ LR 
Sbjct: 299  SITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRP 358

Query: 1086 AVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMA----- 1187
             VPA ANV+ILN +SQ R                     T +A+HMSNMISSGMA     
Sbjct: 359  VVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPA 418

Query: 1188 -----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL----- 1337
                 SS  S +SS+ GSG     +QVAQNS LGS  S  SN+  NS++GI   L     
Sbjct: 419  TQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNLQG 478

Query: 1338 ---MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--Q 1502
               MG +   + QG L  G Q+ Q GI +NQNM++ L  S +SSG GTMIPTPGMSQ  Q
Sbjct: 479  GVSMGQTVPGMSQGNL-PGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQ 537

Query: 1503 SGSHSLEVANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRS 1679
             G  SL V NN A NMPL QQ    +Q +QSKYVK+WEG+LSGQRQG PVFI +LEGYRS
Sbjct: 538  PGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRS 597

Query: 1680 QTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAV 1859
             +AS+SLAA+WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAV
Sbjct: 598  ASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 657

Query: 1860 IQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQV 1964
            IQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 658  IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 692


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  733 bits (1892), Expect = 0.0
 Identities = 405/688 (58%), Positives = 489/688 (71%), Gaps = 36/688 (5%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQL+V VEGTAA+GPYWQ +++DYLDKIIR + GNEL GQK S +N EL+LV+FN H
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWT+D+D+FLQWLS + F+GGGF++AAIAEGL+EALMMF V+ N S   
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAA+N              ++E  E+ E QTES L+DAE VAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQLPKL+SIYN GK+NPR ADP VD+V+NP FLVL+S++F+EA AALSR  L
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             N + +NQ   K+D +S   +S  P  + PSVNG +M R  I VG++PTATVKVEP TV+
Sbjct: 241  SNMT-ANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVT 298

Query: 909  SMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            S+ SGPGF H+ S+     Q V             EM +N D  Q++KP+++ +SQ LR 
Sbjct: 299  SITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRP 358

Query: 1086 AVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMA----- 1187
             VPA ANV+ILN +SQ R                     T +A+HMSNMISSGMA     
Sbjct: 359  VVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPA 418

Query: 1188 -----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGI-PPTLMGLS 1349
                 SS  S +SS+ GSG     +QVAQNS LGS  S  SN+  NS++GI  P + G+S
Sbjct: 419  TQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLIPGMS 478

Query: 1350 ASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QSGSHSLE 1523
              N+       G Q+ Q GI +NQNM++ L  S +SSG GTMIPTPGMSQ  Q G  SL 
Sbjct: 479  QGNL------PGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGMPSLG 532

Query: 1524 VANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSL 1700
            V NN A NMPL QQ    +Q +QSKYVK+WEG+LSGQRQG PVFI +LEGYRS +AS+SL
Sbjct: 533  VNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASESL 592

Query: 1701 AADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQT 1880
            AA+WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAVIQLPSQT
Sbjct: 593  AANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 652

Query: 1881 LLLSVSDKAGRLIGMLFPGDMVVFKPQV 1964
            LLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 653  LLLSVSDKACRLIGMLFPGDMVVFKPQI 680


>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  733 bits (1891), Expect = 0.0
 Identities = 408/696 (58%), Positives = 496/696 (71%), Gaps = 42/696 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAE+QLIV VEGTAA+GPYWQT+++DYLDKIIRC+  +ELTGQK S +N ELALV FNTH
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWTKD+DIFLQWLS + FSGGGF++AAIAEGLSEALMMFP++ N +   
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAASN              +LE  EN E QTES L+DAETVAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQL KL++IY+ GK+NPRA DP VD+VRNP FLVL+SE F+E  AALSR  +
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
            P+ + SNQ   K+D +S  S +G P T+ PSVNG+MM RQP++VG++PTAT+KVEP T++
Sbjct: 241  PSLA-SNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIKVEPTTIT 299

Query: 909  SMVSGPGFSHVSSITNVPQ-VVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            SM +GP F H+ ++   P   +             E+  + D  QE+KP ++ ++QPLR 
Sbjct: 300  SMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLR- 358

Query: 1086 AVPAPANVNILNTISQHR--------------------TPVAVHMSNMISSGMA------ 1187
             VP  ANVNILN +SQ R                    TPVA+HMSNMISSGMA      
Sbjct: 359  PVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVPPA 418

Query: 1188 ----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL------ 1337
                SS  S ++S+ GSG      QV  NS L S AS  SN+  NS+IG+   +      
Sbjct: 419  QTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQSG 478

Query: 1338 --MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QS 1505
              MG S   + QG   SGAQ+ Q G+ ++QNM + L  S+VSSG GTM P PGMSQ  QS
Sbjct: 479  VSMGQSVPGMSQGN-HSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGTMFPIPGMSQQVQS 536

Query: 1506 GSHSLEVANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQ 1682
            G  +L V+N+ A +MPL+QQ  + +Q +QSKYVK+WEG+LSGQRQG PVFI +LEGYRS 
Sbjct: 537  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 596

Query: 1683 TASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVI 1862
            +AS++LAA WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAVI
Sbjct: 597  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 656

Query: 1863 QLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            QLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 657  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 692


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  731 bits (1887), Expect = 0.0
 Identities = 416/695 (59%), Positives = 490/695 (70%), Gaps = 41/695 (5%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            M+EKQLIV VEGTAA+GPYWQ+I++DYL+KIIRC+  NEL GQ  S +N EL+LV FNTH
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWTKD+DIFL WLST+ F+GGGF++AAIAEGLSEALMMF V+ N S N 
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAASN              +L+  EN E Q ES L+DAETVAKSF QC 
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQLPKL +IYN  K+NPRAADP VD+ +NP FLVL+SE F+EA AALSR  +
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 239

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             N +  NQ   K+D +   S++G   T+ PSVNG  + R PI+VG++PTATVKVEP TV+
Sbjct: 240  ANLA-PNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVT 296

Query: 909  SMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            SMV+GP F H+ S++    Q V             EM  + D+  E+KPL++ +SQPLR 
Sbjct: 297  SMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRP 356

Query: 1086 AVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMA----- 1187
              PA ANVNILN +SQ R                     TP+A+HMSNMISSGMA     
Sbjct: 357  MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 416

Query: 1188 -----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPP---TLMG 1343
                 SSA S I+S+ GSG     SQV QNS L S  S  SNL GNS+  I     TL G
Sbjct: 417  SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 476

Query: 1344 LSASNVGQGTLT---SGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QSG 1508
             ++     G      SG Q+ Q GI++NQNM++ L  S VSSG GTMIPTPGMSQ  QSG
Sbjct: 477  GASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSG 536

Query: 1509 SHSLEVANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQT 1685
               L V NN A+NM L+QQ  + +  SQSKYVK+WEGSLSGQRQG PVFI KLEGYRS +
Sbjct: 537  MQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSAS 596

Query: 1686 ASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQ 1865
            AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAVIQ
Sbjct: 597  ASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQ 656

Query: 1866 LPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            LPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 657  LPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 691


>ref|XP_004956526.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Setaria italica]
          Length = 773

 Score =  731 bits (1887), Expect = 0.0
 Identities = 400/683 (58%), Positives = 484/683 (70%), Gaps = 30/683 (4%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            AE+QL+V VEGTAALGPYW TI+ DY++KI+R +  NE+ GQKL+G  PELALVVF+THG
Sbjct: 6    AERQLVVAVEGTAALGPYWSTIVGDYVEKIVRSFCANEVPGQKLAGAPPELALVVFHTHG 65

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F VQRSGWTKD+D FL WLS + FSGGGFSEA+  EGL+EALM+   + N + +H 
Sbjct: 66   PYSAFGVQRSGWTKDIDSFLSWLSGIPFSGGGFSEASTCEGLAEALMILQGTPNTTQSHP 125

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              E QKHC+LVAASN              S +HKENTE   E  +ADAETVAKSF+QC V
Sbjct: 126  NHEAQKHCVLVAASNPYPLPTPVYCLPTQSTDHKENTESSKEPSIADAETVAKSFAQCSV 185

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSVISPKQLP L++IYN GK+NPRAADPSVDH +NP FLVLLSE F+EA  ALSR L  
Sbjct: 186  SLSVISPKQLPTLKAIYNAGKRNPRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 245

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
            N +  NQ + K+D + + +++G  + ANPSVNG MM RQP+ VG I TATVKVEP TV  
Sbjct: 246  NLA-PNQTVTKMDTTPSVTMAGPTSNANPSVNGPMMGRQPVGVGGISTATVKVEPATVPP 304

Query: 912  MVSGPGFSHVSSITNV-PQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            MVS P FSHV+ I+NV  Q +             E N   D  QE KP+++P+ QP+R  
Sbjct: 305  MVSAPAFSHVTPISNVSSQGISALQTSSPSLISQEANFANDNVQEHKPIIHPVQQPVRPG 364

Query: 1089 VPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMASSAHST 1205
                 + ++LN +SQ R                     TP+ VHMSNMISSGM S+  S 
Sbjct: 365  ----GHGSLLNNLSQVRLMNSTSLGGGATSMGLPNIGATPIQVHMSNMISSGMTSTP-SV 419

Query: 1206 ISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--------MGLSASNV 1361
            ISS+   G P++  Q+ Q++ +GS  S  S + GNS+I +  +L        MG SA  V
Sbjct: 420  ISSMSAPGQPISTQQMVQSTAIGSFGSNTSTVSGNSNIAVSSSLPSIQSSMGMGQSAQPV 479

Query: 1362 GQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIA 1541
             QG L +G+Q+ Q GI  NQN ++ L  +++SS P  M+PTPGM+Q +G +SL V NN A
Sbjct: 480  AQGGLMAGSQLGQGGIGANQN-VSVLGPTAISSAP-AMMPTPGMAQPTGVNSLGVTNNSA 537

Query: 1542 INMPLAQQAPNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPA 1721
            +NMP+ Q  PN QQ   KYV+IWEG+LSGQRQG PVFICKLEGYRS TAS++LAADWP  
Sbjct: 538  MNMPIGQH-PNAQQLPPKYVRIWEGTLSGQRQGQPVFICKLEGYRSGTASETLAADWPET 596

Query: 1722 MQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSD 1901
            MQIVRLIAQ+HMNNKQYVGKAD LVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLS+SD
Sbjct: 597  MQIVRLIAQEHMNNKQYVGKADLLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSMSD 656

Query: 1902 KAGRLIGMLFPGDMVVFKPQVPS 1970
            KAGRLIGMLFPGDMVVFKPQVP+
Sbjct: 657  KAGRLIGMLFPGDMVVFKPQVPT 679


>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  717 bits (1850), Expect = 0.0
 Identities = 403/696 (57%), Positives = 489/696 (70%), Gaps = 42/696 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAE+QLIV VEGTAA+GPYWQT+++DYLDKIIRC+  +ELTGQK S +N ELALV FNTH
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQRSGWTKD+DIFLQWLS + FSGGGF++AAIAEGLSEALMMFP++ N +   
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + Q+HCILVAASN              +LE  EN E QTES L+DAETVAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLSVI PKQL KL++IY+ GK+NPRA DP VD+VRNP FLVL+SE F+E  AALSR  +
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
            P+ + SNQ   K+D +S             SVNG+MM RQP++VG++PTAT+KVEP T++
Sbjct: 241  PSLA-SNQSPVKMDMASV-----------TSVNGSMMSRQPVSVGNVPTATIKVEPTTIT 288

Query: 909  SMVSGPGFSHVSSITNVPQ-VVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            SM +GP F H+ ++   P   +             E+  + D  QE+KP ++ ++QPLR 
Sbjct: 289  SMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLR- 347

Query: 1086 AVPAPANVNILNTISQHR--------------------TPVAVHMSNMISSGMA------ 1187
             VP  ANVNILN +SQ R                    TPVA+HMSNMISSGMA      
Sbjct: 348  PVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVPPA 407

Query: 1188 ----SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL------ 1337
                SS  S ++S+ GSG      QV  NS L S AS  SN+  NS+IG+   +      
Sbjct: 408  QTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQSG 467

Query: 1338 --MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QS 1505
              MG S   + QG   SGAQ+ Q G+ ++QNM + L  S+VSSG GTM P PGMSQ  QS
Sbjct: 468  VSMGQSVPGMSQGN-HSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGTMFPIPGMSQQVQS 525

Query: 1506 GSHSLEVANNIAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQ 1682
            G  +L V+N+ A +MPL+QQ  + +Q +QSKYVK+WEG+LSGQRQG PVFI +LEGYRS 
Sbjct: 526  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 585

Query: 1683 TASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVI 1862
            +AS++LAA WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAVI
Sbjct: 586  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 645

Query: 1863 QLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            QLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 646  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 681


>dbj|BAD36509.1| putative SMA-9 class B [Oryza sativa Japonica Group]
            gi|215769266|dbj|BAH01495.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 842

 Score =  704 bits (1818), Expect = 0.0
 Identities = 390/668 (58%), Positives = 471/668 (70%), Gaps = 15/668 (2%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            AE+QL+V VEGTAALGPYW   + DY++KI+R +  +E+ GQKL+GT PELALVVF+THG
Sbjct: 6    AERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHG 65

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F VQRSGWTKD+++FL WLS + FSGGGFSEAAI+EGL+EALM+   S + S NHQ
Sbjct: 66   PYSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQ 125

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              EVQKHCILVAASN              S +HKEN +   ES LADAETVAKSF+QC V
Sbjct: 126  SHEVQKHCILVAASNPYPLPTPVYRPLVQSSDHKENNDGAKESCLADAETVAKSFAQCSV 185

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSV+SPKQLP L++IYN  K+NPRAADPSVDH +NP FLVLLS+ F+EA  ALSR  LP
Sbjct: 186  SLSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRP-LP 244

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
               ++N  I K+D ++A S+    +  NPSVNG M+ RQP  V     A +K EP T+  
Sbjct: 245  GNLVTNHPITKMD-TAATSVPVPTSNGNPSVNGPMLTRQPNGV----VANIKTEPTTLPP 299

Query: 912  MVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            MVS P FSHV+ + N V Q +             E N   D+ QE KPL+NP+ Q +R  
Sbjct: 300  MVSAPAFSHVTPVANGVSQGLSSVQSPSPSLISQETNLANDSVQEHKPLINPIQQSIRPG 359

Query: 1089 VPAPANVNILNTISQHRTPVAVHMSNMISSGMASSAHSTISSVPGSGPPMAMSQVAQNSP 1268
               PANV+ILN +SQHR+     ++ +IS GM     S      G+G  +   QV QN+ 
Sbjct: 360  --GPANVSILNNLSQHRS-----VATIISGGMPGIPMS------GTGQSIGSQQVVQNTA 406

Query: 1269 LGSLASV--NSNLGGNSSIGIPPTLMGLSASNVGQGTLTSGAQISQVGITINQNMINNLV 1442
             GS   +  NSN+  +SS+G   + +G+S   V QG      Q+ Q GI  NQNMI++L 
Sbjct: 407  FGSNTPITGNSNIAVSSSLGGIQSNIGISGPPVTQGGSMGSTQLGQGGINTNQNMISSLG 466

Query: 1443 SSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIAINMPLAQQAPNIQQSQS---------- 1592
            +++VSS P  M+PTPGM+QQ+G +SL V N+ A+NMP+ Q  PN QQ Q           
Sbjct: 467  TTTVSSAP-AMMPTPGMAQQAGVNSLGVTNSSAMNMPIVQH-PNAQQQQQQQQQQQQQQP 524

Query: 1593 --KYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPAMQIVRLIAQDHMNNK 1766
              KYVKIWEG+LSGQRQG PVFICKLEGYRS TAS++LAADWP  MQIVRLIAQ+HMNNK
Sbjct: 525  PPKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASETLAADWPETMQIVRLIAQEHMNNK 584

Query: 1767 QYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMV 1946
            QYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMV
Sbjct: 585  QYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMV 644

Query: 1947 VFKPQVPS 1970
            VFKPQVP+
Sbjct: 645  VFKPQVPT 652


>tpg|DAA39874.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea mays]
          Length = 880

 Score =  699 bits (1804), Expect = 0.0
 Identities = 389/680 (57%), Positives = 468/680 (68%), Gaps = 30/680 (4%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            A++QL+V VEGTAALGPYW TI+ +Y++KI+R +  +EL GQKL GT PELALVVF+THG
Sbjct: 4    ADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFHTHG 63

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F VQRSGWTKD+D FL WLS + FSGGGFSEA+  EGL+EAL +   + N +  HQ
Sbjct: 64   PYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPNTTQGHQ 123

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              E QKHCILVAASN              S +HKEN E   E  +ADAETVAKSF+QC V
Sbjct: 124  NHEAQKHCILVAASNPYPLPTPVYCLPTQSTDHKENIETSKEPSIADAETVAKSFAQCSV 183

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSVISPKQLP L++IYN GK+N RAADPSVDH +NP FLVLLSE F+EA  ALSR L  
Sbjct: 184  SLSVISPKQLPTLKAIYNAGKRNLRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 243

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
            N +  NQ I K+D + A ++ G      P+ NG    RQPI VG I T +VKVEP T+  
Sbjct: 244  NLA-PNQTITKMDTAPAVTMPG------PTSNGNSSGRQPI-VGGISTTSVKVEPTTMPP 295

Query: 912  MVSGPGFSHVSSITNV-PQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            +VS P FSHV+ I+NV  Q +             E N   D  QE KP++NP+ QP+R  
Sbjct: 296  IVSAPAFSHVTPISNVASQGISALQTSSPSLISQEANMGNDNVQEHKPIINPVQQPIRPG 355

Query: 1089 VPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMASSAHST 1205
                 + ++LN +SQ R                     TP+ VHMSNMISSGM S+  S 
Sbjct: 356  ----GHGSLLNNLSQVRLMNSTSLGGGATSMGLPNMGATPIQVHMSNMISSGMTSTP-SV 410

Query: 1206 ISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--------MGLSASNV 1361
            ISS+ G G P++  Q+ Q++ LGS  S    + GNS+I +  +L        MG S  +V
Sbjct: 411  ISSMSGPGQPISTQQMVQSTALGSFGSNTPTVTGNSTIAVSSSLTNNQSSMGMGQSVQSV 470

Query: 1362 GQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIA 1541
             QG L SG+Q+ Q GI  NQN+++ L  +++SS P  M+PTPGM  Q+G +SL V NN A
Sbjct: 471  AQGGLVSGSQLGQGGIVANQNVMSTLGPTAISSTP-AMMPTPGMVPQTGVNSLGVNNNSA 529

Query: 1542 INMPLAQQAPNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPA 1721
            +NMP+ QQ  N QQ   KYVKIWEG+LSGQRQG PV ICKLEGYRS TAS++LAADWP  
Sbjct: 530  MNMPITQQHANAQQPPPKYVKIWEGTLSGQRQGQPVIICKLEGYRSGTASETLAADWPET 589

Query: 1722 MQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSD 1901
            MQIVRLIAQ+HMNNKQYVGKADFLVFRTLN HGFL QLQEKKLCAVIQLPSQTLLLS++D
Sbjct: 590  MQIVRLIAQEHMNNKQYVGKADFLVFRTLNHHGFLVQLQEKKLCAVIQLPSQTLLLSMAD 649

Query: 1902 KAGRLIGMLFPGDMVVFKPQ 1961
            KAGRLIGMLFPGDMVVFKPQ
Sbjct: 650  KAGRLIGMLFPGDMVVFKPQ 669


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
            gi|550332870|gb|EEE88812.2| hypothetical protein
            POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  696 bits (1795), Expect = 0.0
 Identities = 390/705 (55%), Positives = 483/705 (68%), Gaps = 51/705 (7%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MA+KQLIV VEGTAA+GP+W  I++DYL+KIIRCY GNE +GQK   ++ EL+LV FN+H
Sbjct: 1    MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQRSGWT+D+DIFL WLS + F+GGGF++AAIAEGLSEALMMFP++ N +   
Sbjct: 61   GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
               + Q++CIL+AASN              +LE  EN + Q ES L+DAETVAKSF QC 
Sbjct: 121  PNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSR--- 719
            VSLSVI PKQLPKLR IYN GK+N RAADP VD+++NP FLVL+SE F+EA AALSR   
Sbjct: 181  VSLSVICPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGA 240

Query: 720  SLLPNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPM 899
            + LP    SNQ   K+D +S  S++G    + PSVNG++  R PI+VG++PTATVKVEP 
Sbjct: 241  TSLP----SNQTPVKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPS 296

Query: 900  TVSSMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQP 1076
            T++SM +G  F H++S+     Q V             +M  N +  Q++KP ++  +Q 
Sbjct: 297  TITSMANGSAFPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQS 356

Query: 1077 LRAAVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMASS 1193
             R+A PA ANVNILN +SQ R                     T VA+HMS+MISSGM SS
Sbjct: 357  ARSAPPAAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSS 416

Query: 1194 AHST----------ISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTLMG 1343
              +           +SS+ GSG     +Q+  NS LGS  S  SN+ GNS++G     MG
Sbjct: 417  VPAAQTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMG 476

Query: 1344 ------------LSASNVGQGTLT-SGAQISQVGITINQNMINNLVSSSVSSGPGTMIPT 1484
                        +S       T++ SGAQ+ Q G+  N N ++ L +S VSSG  TMIPT
Sbjct: 477  NLHAGVSISQSAMSGLGTNPNTMSGSGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPT 536

Query: 1485 PGMSQ--QSGSHSLEVANNIAINMPLAQQ-APNIQQSQSKYVKIWEGSLSGQRQGLPVFI 1655
            PGMSQ  QSG   L   NN A N+PL+QQ A  +Q +QSKYVK+WEG+LSGQRQG PVFI
Sbjct: 537  PGMSQQVQSGMQPLGANNNSAANLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFI 596

Query: 1656 CKLEGYRSQTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQL 1835
             +LEGYRS +AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQL
Sbjct: 597  TRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQL 656

Query: 1836 QEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            QEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 657  QEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 701


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Cucumis sativus]
          Length = 858

 Score =  693 bits (1788), Expect = 0.0
 Identities = 388/697 (55%), Positives = 481/697 (69%), Gaps = 43/697 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MA+KQLIVVVEGTAA+GP+WQT+++DY++KI+R + GNELTGQK   +N E +LV F+TH
Sbjct: 1    MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y   +VQR+GWT+D+DIF+QWLS + FSGGGFS+AAIAEGL+EALMMFP   N   N 
Sbjct: 61   GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  ++QKHCILVAASN              +LE  +N  V+  S  + AETVAKSF QCF
Sbjct: 121  QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDN--VEPGSSQSYAETVAKSFPQCF 178

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            +SLSVI PKQLPKL++IY  GK+NPRAADP +D+V++P +LVL+SE FVEA AALSR  +
Sbjct: 179  ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             +   +NQ   K+D SS   ++G P T  PSVNG ++ RQP++V + PTATVKVEP TV+
Sbjct: 239  TSLP-ANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVT 297

Query: 909  SMVSGPGFS-HVSSITNVPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRA 1085
            SM +G G+  H+ S+                    EM  N + TQ++KPL+  + QP+R+
Sbjct: 298  SMTNGSGYPPHMPSVVRAASQGVPSLQTSSPLSSQEMITNNENTQDLKPLVTGVPQPVRS 357

Query: 1086 AVPAPANVNILNTISQHR--------------------TPVAVHMSNMISSGMASSA--- 1196
                PANV+ILN ISQ R                    TP+A+H+SNMISSGM SS    
Sbjct: 358  L--GPANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPAA 415

Query: 1197 -------HSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTLMGLSAS 1355
                    S ++S+ GS     +SQVA NS + SL S N+N+ GN +I     +  L  S
Sbjct: 416  QNVFSSGQSGMTSINGSS---TLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGS 472

Query: 1356 --------NVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQ--S 1505
                     + QG L +G Q+ Q GI ++QN+++NL    VSSG GTMIPTPGM QQ  +
Sbjct: 473  VSVSQSVPGISQGNL-AGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQN 531

Query: 1506 GSHSLEVANNIAINMPLAQQAPNI--QQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRS 1679
            G HSL + NN A NMPL Q +     QQ+QSKYVK WEG+LSGQRQG PVFI ++EGYRS
Sbjct: 532  GMHSLGM-NNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQPVFITRMEGYRS 590

Query: 1680 QTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAV 1859
             +ASD LAA+WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKLCAV
Sbjct: 591  ASASDKLAANWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 650

Query: 1860 IQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            IQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 651  IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 687


>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Glycine max]
          Length = 877

 Score =  684 bits (1764), Expect = 0.0
 Identities = 390/697 (55%), Positives = 473/697 (67%), Gaps = 43/697 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQLIV VE TAA+GPYW TIL DYLDK+IRC+ GN+ TGQK S +N E ALV +NTH
Sbjct: 1    MAEKQLIVAVESTAAMGPYWNTILMDYLDKMIRCFGGNDSTGQKFSASNVEFALVTYNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQRSGWT+D D+F  WLS++ F+GGGF++AAIAEGLSEALMM   S + + N 
Sbjct: 61   GCYSSCLVQRSGWTRDPDVFFSWLSSIPFNGGGFNDAAIAEGLSEALMMLWNSQSGAPNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  ++ KHCILVAASN              +LE  E  +  + S L DAE VAK+F Q  
Sbjct: 121  QSVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDSDSGSHLYDAEAVAKAFPQFS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            +SLSVI PKQLPK++SIYN GK+N RAADP ++  + P FL+L+SE F EA  ALSRS +
Sbjct: 181  ISLSVICPKQLPKIKSIYNAGKRNNRAADPPLE-AKTPHFLILISEGFREARGALSRSGI 239

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             +   SNQ   K+D  S   ++G P T+ P VNG++  RQP+  G++  ATVKVEP+ V+
Sbjct: 240  TSLP-SNQSPVKVDAVSVTPVTGAPPTSMP-VNGSIPNRQPVPAGNVAPATVKVEPVPVT 297

Query: 909  SMVSGPGFSHVSSI---TNVPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPL 1079
            SMVSGP F H SS+   T+  Q V             ++  N +T Q+ KP ++ L  PL
Sbjct: 298  SMVSGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVSML--PL 355

Query: 1080 RAAVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMA--- 1187
            R   P  ANVNILN +SQ R                     TPVA+HMSNMISSGM    
Sbjct: 356  RPVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 415

Query: 1188 -------SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--- 1337
                   SS  S I+S+  SGP    +QV QNS LGSL S  SNL  +S+IGI   L   
Sbjct: 416  PAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475

Query: 1338 -----MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQ 1502
                 +G   S + QG L SGAQ+ Q G+++NQN+++ L  S VSSG GTMIPTPGMSQ 
Sbjct: 476  QGVVSIGQQVSGMSQGNL-SGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPTPGMSQP 534

Query: 1503 SGSHSLEVANNIAINMPLAQQ-APNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRS 1679
              S    + NN A NMPL+QQ +  +Q +QSKYVK+WEGSLSGQRQG PVFI KLEGYR+
Sbjct: 535  VQSVMQPLVNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRN 594

Query: 1680 QTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAV 1859
             +AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +N HGFLGQLQEKKLCAV
Sbjct: 595  SSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAV 654

Query: 1860 IQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            IQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 655  IQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSS 691


>gb|EEC84311.1| hypothetical protein OsI_30806 [Oryza sativa Indica Group]
          Length = 959

 Score =  683 bits (1762), Expect = 0.0
 Identities = 380/659 (57%), Positives = 460/659 (69%), Gaps = 17/659 (2%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            AE+QL+V VEGTAALGPYW   + DY++KI+R +  +E+ GQKL+GT PELALVVF+THG
Sbjct: 105  AERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHG 164

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F VQRSGWTKD+++FL WLS + FSGGGFSEAAI+EGL+EALM+   S + S NHQ
Sbjct: 165  PYSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQ 224

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              EVQKHCILVAASN              S +HKEN +   ES LADAETVAKSF+QC V
Sbjct: 225  SHEVQKHCILVAASNPYPLPTPVYRPLVQSSDHKENNDGAKESCLADAETVAKSFAQCSV 284

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSV+SPKQLP L++IYN  K+NPRAADPSVDH +NP FLVLLS+ F+EA  ALSR  LP
Sbjct: 285  SLSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRP-LP 343

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
               ++N  I K+D ++A S+    +  NPSVNG M+ RQP  V     A +K EP T+  
Sbjct: 344  GNLVTNHPITKMD-TAATSVPVPTSNGNPSVNGPMLTRQPNGV----VANIKTEPTTLPP 398

Query: 912  MVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            MVS P FSHV+ + N V Q +             E N   D+ QE KPL+NP+ Q +R  
Sbjct: 399  MVSAPAFSHVTPVANGVSQGLSSVQSPSPSLISQETNLANDSVQEHKPLINPIQQSIRPG 458

Query: 1089 VPAPANVNILNTISQHRTPVAVHMSNMISSGMASSAHSTISSVPGSGPPMAMSQVAQNSP 1268
               PANV+ILN +SQHR+     ++ +IS GM     S      G+G  +   QV QN+ 
Sbjct: 459  --GPANVSILNNLSQHRS-----VATIISGGMPGIPMS------GTGQSIGSQQVVQNTA 505

Query: 1269 LGSLASV--NSNLGGNSSIGIPPTLMGLSASNVGQGTLTSGAQISQVGITINQNMINNLV 1442
             GS   +  NSN+  +SS+G   + +G+S   V QG      Q+ Q GI  NQNMI++L 
Sbjct: 506  FGSNTPITGNSNIAVSSSLGGIQSNIGISGPPVTQGGSMGSTQLGQGGINTNQNMISSLG 565

Query: 1443 SSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIAINMPLAQQAPNIQQSQS---------- 1592
            +++VSS P  M+PTPGM+QQ+G +SL V N+ A+NMP+ Q  PN QQ Q           
Sbjct: 566  TTTVSSAP-AMMPTPGMAQQAGVNSLGVTNSSAMNMPIVQH-PNAQQQQQQQQQQQQQQQ 623

Query: 1593 ----KYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPAMQIVRLIAQDHMN 1760
                KYVKIWEG+LSGQRQG PVFICKLEGYRS TAS++LAADWP  MQIVRLIAQ+HMN
Sbjct: 624  QPPPKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASETLAADWPETMQIVRLIAQEHMN 683

Query: 1761 NKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPG 1937
            NKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPG
Sbjct: 684  NKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPG 742


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score =  682 bits (1760), Expect = 0.0
 Identities = 382/684 (55%), Positives = 474/684 (69%), Gaps = 32/684 (4%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQLIVVVEGTAA+GPYW  +++DY++K+IR   GNEL+GQK S +  E++LV FNTH
Sbjct: 1    MAEKQLIVVVEGTAAMGPYWPAVVSDYVEKVIRSLSGNELSGQKPSSSTVEMSLVTFNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQR+GWT+D+++FLQWLS +  +GGGFS+AAIAEGLSEALMMFP   N   N 
Sbjct: 61   GSYSGCLVQRTGWTRDIELFLQWLSAIPLAGGGFSDAAIAEGLSEALMMFPTIQNGGQNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  + QKHCILVAASN              ++E  EN + QTES L DAE VAKSF QC 
Sbjct: 121  QNVDFQKHCILVAASNPHPLPTPVYRPQMQNVEQSENFDAQTESRLYDAEAVAKSFPQCS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSR--- 719
            VSLSVI PKQLPKLR+IYN GK+NPRA DP +D+V+NP FLVL+SE F+EA A LSR   
Sbjct: 181  VSLSVICPKQLPKLRAIYNAGKRNPRAEDPPIDNVKNPHFLVLISENFIEARATLSRPGS 240

Query: 720  SLLPNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPM 899
            + LP    S     K+D +   S++G P T+ PSVNG++M R   +VG++P ATVKVEP 
Sbjct: 241  TTLP----SIPSPVKMDIAPVASVTGPPPTSMPSVNGSVMNRPSFSVGNVPPATVKVEPS 296

Query: 900  TVSSMVSGPGFSHVSSITNVPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPL 1079
            TVSSMV+GP F+HV S+    Q V             EMN N ++  ++KP+++ ++  L
Sbjct: 297  TVSSMVAGPAFAHVPSVRPPSQGV--PTLQTSSPSSGEMNTNNESVPDLKPIVSGVTHQL 354

Query: 1080 RAAVPAPANVNILNTISQHR--------------------TPVAVHMSNMISSGMASSAH 1199
            R         +ILN ISQ R                     P+A+H+SNMISSGMASS  
Sbjct: 355  RPV------GSILNNISQARVMNSAALSGGTSIGLQNMGQNPMAMHVSNMISSGMASSV- 407

Query: 1200 STISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTLMGLSA------SNV 1361
            +   +V  S  P  ++QV Q+S L +  S  SN+ GNS++G+   +  L        S  
Sbjct: 408  AAAQNVFSSSAPHTLTQVPQSSGLNTFTSATSNVSGNSNLGMSQPMSNLQGGVSIGQSVP 467

Query: 1362 GQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ--QSGSHSLEVANN 1535
            G     SG Q+ Q GI +N NM++   S+  SSG GTMIPTPG+SQ  QSG  SL  ANN
Sbjct: 468  GMNQNLSGPQMVQNGIGMNPNMMSGHGSAGSSSGTGTMIPTPGISQQAQSGIQSLG-ANN 526

Query: 1536 IAINMPLAQQAPN-IQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADW 1712
             +I+ PL+QQ  + +Q +QSKYVK+WEG+LSGQRQG PVFI +LEGYRS +AS++LAA+W
Sbjct: 527  SSISNPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANW 586

Query: 1713 PPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLS 1892
            PP MQIVRLI+QDHMNNKQYVG+ADFLVFR +NQHGFLGQLQEKKLCAVIQLPSQTLLLS
Sbjct: 587  PPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLS 646

Query: 1893 VSDKAGRLIGMLFPGDMVVFKPQV 1964
            VSDKA RLIGMLFPGDMVVFKPQV
Sbjct: 647  VSDKACRLIGMLFPGDMVVFKPQV 670


>tpg|DAA39875.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea mays]
          Length = 915

 Score =  681 bits (1758), Expect = 0.0
 Identities = 389/715 (54%), Positives = 468/715 (65%), Gaps = 65/715 (9%)
 Frame = +3

Query: 12   AEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTHG 191
            A++QL+V VEGTAALGPYW TI+ +Y++KI+R +  +EL GQKL GT PELALVVF+THG
Sbjct: 4    ADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFHTHG 63

Query: 192  PYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNHQ 371
            PY+ F VQRSGWTKD+D FL WLS + FSGGGFSEA+  EGL+EAL +   + N +  HQ
Sbjct: 64   PYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPNTTQGHQ 123

Query: 372  IPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCFV 551
              E QKHCILVAASN              S +HKEN E   E  +ADAETVAKSF+QC V
Sbjct: 124  NHEAQKHCILVAASNPYPLPTPVYCLPTQSTDHKENIETSKEPSIADAETVAKSFAQCSV 183

Query: 552  SLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLLP 731
            SLSVISPKQLP L++IYN GK+N RAADPSVDH +NP FLVLLSE F+EA  ALSR L  
Sbjct: 184  SLSVISPKQLPTLKAIYNAGKRNLRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 243

Query: 732  NQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVSS 911
            N +  NQ I K+D + A ++ G      P+ NG    RQPI VG I T +VKVEP T+  
Sbjct: 244  NLA-PNQTITKMDTAPAVTMPG------PTSNGNSSGRQPI-VGGISTTSVKVEPTTMPP 295

Query: 912  MVSGPGFSHVSSITNV-PQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPLRAA 1088
            +VS P FSHV+ I+NV  Q +             E N   D  QE KP++NP+ QP+R  
Sbjct: 296  IVSAPAFSHVTPISNVASQGISALQTSSPSLISQEANMGNDNVQEHKPIINPVQQPIRPG 355

Query: 1089 VPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMASSAHST 1205
                 + ++LN +SQ R                     TP+ VHMSNMISSGM S+  S 
Sbjct: 356  ----GHGSLLNNLSQVRLMNSTSLGGGATSMGLPNMGATPIQVHMSNMISSGMTSTP-SV 410

Query: 1206 ISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--------MGLSASNV 1361
            ISS+ G G P++  Q+ Q++ LGS  S    + GNS+I +  +L        MG S  +V
Sbjct: 411  ISSMSGPGQPISTQQMVQSTALGSFGSNTPTVTGNSTIAVSSSLTNNQSSMGMGQSVQSV 470

Query: 1362 GQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQSGSHSLEVANNIA 1541
             QG L SG+Q+ Q GI  NQN+++ L  +++SS P  M+PTPGM  Q+G +SL V NN A
Sbjct: 471  AQGGLVSGSQLGQGGIVANQNVMSTLGPTAISSTP-AMMPTPGMVPQTGVNSLGVNNNSA 529

Query: 1542 INMPLAQQAPNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRSQTASDSLAADWPPA 1721
            +NMP+ QQ  N QQ   KYVKIWEG+LSGQRQG PV ICKLEGYRS TAS++LAADWP  
Sbjct: 530  MNMPITQQHANAQQPPPKYVKIWEGTLSGQRQGQPVIICKLEGYRSGTASETLAADWPET 589

Query: 1722 MQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKL----------------- 1850
            MQIVRLIAQ+HMNNKQYVGKADFLVFRTLN HGFL QLQEKKL                 
Sbjct: 590  MQIVRLIAQEHMNNKQYVGKADFLVFRTLNHHGFLVQLQEKKLSNFVILLRFIYCRFIHL 649

Query: 1851 ------------------CAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQ 1961
                              CAVIQLPSQTLLLS++DKAGRLIGMLFPGDMVVFKPQ
Sbjct: 650  VFCQLLYTVLISNWSWFQCAVIQLPSQTLLLSMADKAGRLIGMLFPGDMVVFKPQ 704


>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
          Length = 863

 Score =  675 bits (1742), Expect = 0.0
 Identities = 388/698 (55%), Positives = 474/698 (67%), Gaps = 44/698 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAE QLIVVVE TAA+GPYW+TIL DYLDK+IR + GN+ TGQK S  N E ALV +NTH
Sbjct: 1    MAEFQLIVVVESTAAMGPYWETILVDYLDKMIRSFGGNDSTGQKSSTPNVEFALVTYNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQR+GWT+D D+F  WLS++ F+GGGF++AAIAEGLSEALMMFP S +   N 
Sbjct: 61   GCYSGCLVQRTGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMFPNSQSGGPNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  +V KHCIL+AASN              +LE  E  +  + + L DAE VAK+F Q  
Sbjct: 121  QSVDVHKHCILIAASNPYPLQTPVYVPRPQNLEQSETIDSDSGNRLYDAEAVAKAFPQFS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            +SLSVI PKQLPK+++IYN GK++ RAADP ++  + P FL+L+SE+F EA +ALSRS +
Sbjct: 181  ISLSVICPKQLPKIKAIYNAGKRSNRAADPPLE-AKTPHFLILISESFREARSALSRSGI 239

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSI-PTATVKVEPMTV 905
             +   SNQ   K+D  S   ++G P T+ PSVNG++  RQP+  G++ P ATVKVE + V
Sbjct: 240  TSLP-SNQSPVKVDAVSVTPVTGAPPTSMPSVNGSIANRQPVPAGNVAPPATVKVEQVPV 298

Query: 906  SSMVSGPGFSHVSSI---TNVPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQP 1076
            +SMVSGP F H SS+   T+  QVV             ++  N +  Q+ KP ++ L Q 
Sbjct: 299  TSMVSGPPFPHNSSVPRATSTSQVVPSLQTSSPSSVSQDIITNNENAQDTKPTVSML-QS 357

Query: 1077 LRAAVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMAS- 1190
            LR   P  ANV+ILN +SQ R                     TPVA+HMSNMISSGM S 
Sbjct: 358  LRPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSS 417

Query: 1191 ---------SAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL-- 1337
                     S  S I+S+  SGP    +QV QN  LGSL S  SNL  +S+IGI   L  
Sbjct: 418  VPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGISQPLGN 477

Query: 1338 ------MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ 1499
                  MG  AS + QG L SG Q+ Q G+ +NQN ++ L SS VSSG GTMIPTPGMSQ
Sbjct: 478  LQGAVSMGQQASGMSQGNL-SGPQMVQGGVPMNQNAMSALGSSVVSSGNGTMIPTPGMSQ 536

Query: 1500 QSGSHSLEVANNIAINMPLAQQ-APNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYR 1676
            Q  S    + NN A NMPL+QQ +  +Q +QSKYVK+WEGSLSGQRQG PVFI KLEGYR
Sbjct: 537  QVQSGMQALGNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYR 596

Query: 1677 SQTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCA 1856
            + +AS+SLA++WP  MQIVRLI+QDHMNNKQYVGKADFLVFR +N HGFLGQLQEKKLCA
Sbjct: 597  NSSASESLASNWPSVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCA 656

Query: 1857 VIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            VIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 657  VIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSS 694


>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Glycine max]
            gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Glycine max]
          Length = 832

 Score =  673 bits (1737), Expect = 0.0
 Identities = 385/697 (55%), Positives = 470/697 (67%), Gaps = 43/697 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQLIV VE TAA+GPYW TIL DYLDK+IRC+ GN+ TGQK S +  E ALV +NTH
Sbjct: 1    MAEKQLIVAVESTAAMGPYWDTILMDYLDKMIRCFGGNDSTGQKSSASIVEFALVTYNTH 60

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQRSGWT+D D+F  WLS++ F+GGGF++AAIAEGLSEALMM  +S + + N 
Sbjct: 61   GCYSSCLVQRSGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMLWISQSGAPNQ 120

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
            Q  ++ KHCILVAASN              +LE  E  ++ + S L DAE VAK+F Q  
Sbjct: 121  QSVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDLDSGSHLYDAEAVAKAFPQFS 180

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            +SLSVI PKQLPK+++IYN GK+N RAAD  ++  + P FL+L+SE F EA  ALSRS +
Sbjct: 181  ISLSVICPKQLPKIKTIYNAGKRNNRAADSPLE-AKTPHFLILISEGFREAWGALSRSGI 239

Query: 729  PNQSISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMTVS 908
             +   SNQ   K+D  S   ++  P T+ P VNG++  RQP+  G++  ATVKVEP+ V+
Sbjct: 240  TSLP-SNQSPVKVDAVSVTPVTEAPPTSMP-VNGSIPNRQPVPAGNVAPATVKVEPVLVA 297

Query: 909  SMVSGPGFSHVSSI---TNVPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPL 1079
            SMVSGP F H SS+   T+  Q V             ++  N +  Q+ KP ++ L  PL
Sbjct: 298  SMVSGPAFPHNSSVPRATSTSQGVPSLQTSSLSSVSQDIITNNENAQDTKPTVSML--PL 355

Query: 1080 RAAVPAPANVNILNTI---------------------SQHRTPVAVHMSNMISSGMA--- 1187
            R   PA ANVNILN +                     S  +TPVA+HMSNMISSGM    
Sbjct: 356  RPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 415

Query: 1188 -------SSAHSTISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTL--- 1337
                   SS  S I+S+  SGP    +QV QNS LGSL S  SNL  +S+IGI   L   
Sbjct: 416  PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475

Query: 1338 -----MGLSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQQ 1502
                 MG   S + QG L SGAQ+ Q G+ +NQN+++ L  S VSSG GTMIPTPGMSQ 
Sbjct: 476  QGAVSMGQQVSGMSQGNL-SGAQMVQGGVNMNQNVMSGLGQSVVSSGTGTMIPTPGMSQP 534

Query: 1503 SGSHSLEVANNIAINMPLAQQ-APNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEGYRS 1679
              S    + NN A NMPL+QQ +  +Q +QSKYVK+WEGSLSGQRQG PVFI KLEGYR+
Sbjct: 535  VQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRN 594

Query: 1680 QTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAV 1859
             +AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +N HGFLGQLQEKKLCAV
Sbjct: 595  SSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAV 654

Query: 1860 IQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            IQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 655  IQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSS 691


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
            gi|222864996|gb|EEF02127.1| PHYTOCHROME AND FLOWERING
            TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  672 bits (1734), Expect = 0.0
 Identities = 387/700 (55%), Positives = 471/700 (67%), Gaps = 46/700 (6%)
 Frame = +3

Query: 9    MAEKQLIVVVEGTAALGPYWQTILNDYLDKIIRCYYGNELTGQKLSGTNPELALVVFNTH 188
            MAEKQLIV VEGTAA+GP+W  I++DYL+KIIR          K+  +  EL++V FN+H
Sbjct: 1    MAEKQLIVAVEGTAAMGPFWSIIVSDYLEKIIR---------YKVPTSIVELSIVTFNSH 51

Query: 189  GPYNDFVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMFPVSINASDNH 368
            G Y+  +VQRSGWT+D+DIFLQWLS + F+GGGF++AAIAEGLSEALMMFP+  N S   
Sbjct: 52   GSYSACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPIDPNGSQTQ 111

Query: 369  QIPEVQKHCILVAASNXXXXXXXXXXXXXSSLEHKENTEVQTESFLADAETVAKSFSQCF 548
               + Q++CIL+AASN              +LE  EN + Q ES L+DAETVAKSF QC 
Sbjct: 112  SNIDEQRNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCS 171

Query: 549  VSLSVISPKQLPKLRSIYNWGKKNPRAADPSVDHVRNPQFLVLLSETFVEACAALSRSLL 728
            VSLS+I PKQLPKLRSIYN GK+N RAADP VD V+NP FLVL+SE F+EA AALS   L
Sbjct: 172  VSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALS---L 228

Query: 729  PNQS--ISNQGIGKIDGSSAGSISGLPATANPSVNGTMMPRQPITVGSIPTATVKVEPMT 902
            P  +   SNQ   K+D +S  S++G   T+ PSVNG++  R  I+VG++PTATVKVEP T
Sbjct: 229  PGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPST 288

Query: 903  VSSMVSGPGFSHVSSITN-VPQVVXXXXXXXXXXXXXEMNANIDTTQEIKPLLNPLSQPL 1079
            ++SM +GP F H  S+     Q V             +M  + D  Q++KP ++ ++Q  
Sbjct: 289  ITSMANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKPNVSVMTQSA 348

Query: 1080 RAAVPAPANVNILNTISQHR---------------------TPVAVHMSNMISSGMASSA 1196
            R   PA ANV+ILN ISQ R                     T VA+HMSNMISSGMASS 
Sbjct: 349  RPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSGMASSV 408

Query: 1197 HST----------ISSVPGSGPPMAMSQVAQNSPLGSLASVNSNLGGNSSIGIPPTLMG- 1343
             +           +SS+ GSG     +Q+  NS LGS  S  SN+ GNS++G     MG 
Sbjct: 409  PAAPTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISQPMGN 468

Query: 1344 --------LSASNVGQGTLTSGAQISQVGITINQNMINNLVSSSVSSGPGTMIPTPGMSQ 1499
                     SA  + QG + SGAQ+ Q G+  N N ++ L  S VSSG  TMIPTPGMSQ
Sbjct: 469  LQAGVSIGQSAPGMSQGNI-SGAQMVQSGMGANPNTMSGLGPSGVSSGLNTMIPTPGMSQ 527

Query: 1500 Q--SGSHSLEVANNIAINMPLAQQ-APNIQQSQSKYVKIWEGSLSGQRQGLPVFICKLEG 1670
            Q  SG   L   NN A N+ ++QQ A  +Q  QSKYVK+WEG+LSGQRQG PVFI +LEG
Sbjct: 528  QVQSGMQPLGANNNSADNLSMSQQTAGGLQPPQSKYVKVWEGNLSGQRQGQPVFITRLEG 587

Query: 1671 YRSQTASDSLAADWPPAMQIVRLIAQDHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKL 1850
            YRS +AS++LAA+WPP MQIVRLI+QDHMNNKQYVGKADFLVFR +NQHGFLGQLQEKKL
Sbjct: 588  YRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 647

Query: 1851 CAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPS 1970
            CAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+ S
Sbjct: 648  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 687