BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00007078
         (1004 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...   493   e-137
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   493   e-137
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza...   493   e-137
gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japo...   493   e-137
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...   492   e-137
gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza...   492   e-137
ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [S...   487   e-135
ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I sub...   447   e-123
gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triti...   447   e-123
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              443   e-122
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   443   e-122
gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegil...   436   e-120
gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   431   e-118
gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma ca...   426   e-117
gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma ca...   426   e-117
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...   426   e-117
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...   426   e-117
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   423   e-116
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe...   422   e-116
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   422   e-116

>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
            italica]
          Length = 1682

 Score =  493 bits (1269), Expect = e-137
 Identities = 242/336 (72%), Positives = 278/336 (82%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQ--CRSQSPMERGYEIFFLKAILVPPNKF 829
            G  HLLP+EVE ILK LWKNEA  C+L+ D Q    S S   +GYE+FFL ++LV PN+F
Sbjct: 301  GKKHLLPTEVESILKGLWKNEARFCMLLCDFQQDTLSVSEKRKGYEMFFLNSLLVAPNRF 360

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+ +S+  G+MEHPQN LL+KVQ+AN+AL+  +  SN+ D+LRRWMDLQRSVNVLYDS+
Sbjct: 361  RPSTSSSL-GIMEHPQNVLLSKVQEANLALQHNSASSNHMDVLRRWMDLQRSVNVLYDSS 419

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KG+ KSEK ++GIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 420  KGIVKSEKNAHGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 479

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN KKL+ AV NGADIHPGATHY+D   +YKLQA+   R  I++ LP SR
Sbjct: 480  RLTYPEKVTPWNAKKLQEAVRNGADIHPGATHYRDNSNIYKLQAAPAKRRAIAKMLPASR 539

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P  +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKTIRMHY
Sbjct: 540  GSISQPGKDPNCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHY 599

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 600  ANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVDAN 635


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  493 bits (1269), Expect = e-137
 Identities = 240/336 (71%), Positives = 280/336 (83%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILKDLWK EA  C+L+ D Q  + S  E  RGYE+FFLK +LV PN+F
Sbjct: 291  GKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRF 350

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+ +S+  G+MEHPQN LL+KVQ++N+AL+     SN+ ++LRRWMDLQR+VNVLYDS+
Sbjct: 351  RPSISSSL-GIMEHPQNVLLSKVQESNLALQQSIAASNHMEVLRRWMDLQRNVNVLYDSS 409

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL K+EK +NGIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 410  KGLSKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 469

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 470  RLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPPKRRAIAKMLPASR 529

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GEKTIRMHY
Sbjct: 530  GSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHY 589

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 590  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 625


>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
          Length = 1830

 Score =  493 bits (1269), Expect = e-137
 Identities = 241/336 (71%), Positives = 279/336 (83%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILK+LWKNEA  C+L+ D Q  + +  +  RGYE+FFLK +LV PN+F
Sbjct: 282  GKKHLLTTEVESILKNLWKNEARFCMLLCDFQQNTLNVSDKGRGYEMFFLKNLLVAPNRF 341

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+ +S+  G+MEHPQN LL KVQ+AN+AL+     SN+ ++LRRWMDLQRSVNVLYDS+
Sbjct: 342  RPSISSSL-GIMEHPQNVLLGKVQEANLALQQSNTSSNHMEVLRRWMDLQRSVNVLYDSS 400

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL KSEK +NGIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 401  KGLAKSEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 460

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 461  RLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPPKRRAIAKMLPASR 520

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKTIRMHY
Sbjct: 521  GSISQPGKDPKCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHY 580

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 581  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 616


>gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japonica Group]
          Length = 994

 Score =  493 bits (1269), Expect = e-137
 Identities = 240/336 (71%), Positives = 280/336 (83%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILKDLWK EA  C+L+ D Q  + S  E  RGYE+FFLK +LV PN+F
Sbjct: 73   GKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRF 132

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+ +S+  G+MEHPQN LL+KVQ++N+AL+     SN+ ++LRRWMDLQR+VNVLYDS+
Sbjct: 133  RPSISSSL-GIMEHPQNVLLSKVQESNLALQQSIAASNHMEVLRRWMDLQRNVNVLYDSS 191

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL K+EK +NGIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 192  KGLSKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 251

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 252  RLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPPKRRAIAKMLPASR 311

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GEKTIRMHY
Sbjct: 312  GSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHY 371

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 372  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 407


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
            brachyantha]
          Length = 1755

 Score =  492 bits (1267), Expect = e-137
 Identities = 240/336 (71%), Positives = 279/336 (83%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILKDLWKNEA  C+L+ D Q  + +  E  RGYE+FFLK +LV PN+F
Sbjct: 283  GKKHLLATEVESILKDLWKNEARFCMLLCDFQQNTLNVSEKKRGYEMFFLKNLLVAPNRF 342

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+  S+  G+MEHPQN LL+KVQ+AN+AL+     SN+ ++LRRWMD+QRSVNVLYDS+
Sbjct: 343  RPSIHSSL-GIMEHPQNILLSKVQEANLALQQSNAASNHMEVLRRWMDMQRSVNVLYDSS 401

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL K+EK +NGIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 402  KGLAKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 461

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 462  RLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPAKRRAIAKMLPASR 521

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAH VRVL GEKTIRMHY
Sbjct: 522  GSISQAGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHY 581

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 582  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 617


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza brachyantha]
          Length = 1138

 Score =  492 bits (1267), Expect = e-137
 Identities = 240/336 (71%), Positives = 279/336 (83%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILKDLWKNEA  C+L+ D Q  + +  E  RGYE+FFLK +LV PN+F
Sbjct: 283  GKKHLLATEVESILKDLWKNEARFCMLLCDFQQNTLNVSEKKRGYEMFFLKNLLVAPNRF 342

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+  S+  G+MEHPQN LL+KVQ+AN+AL+     SN+ ++LRRWMD+QRSVNVLYDS+
Sbjct: 343  RPSIHSSL-GIMEHPQNILLSKVQEANLALQQSNAASNHMEVLRRWMDMQRSVNVLYDSS 401

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL K+EK +NGIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 402  KGLAKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 461

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 462  RLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPAKRRAIAKMLPASR 521

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAH VRVL GEKTIRMHY
Sbjct: 522  GSISQAGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHY 581

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 582  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 617


>ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [Sorghum bicolor]
            gi|241945458|gb|EES18603.1| hypothetical protein
            SORBIDRAFT_09g027223 [Sorghum bicolor]
          Length = 799

 Score =  487 bits (1253), Expect = e-135
 Identities = 238/336 (70%), Positives = 277/336 (82%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLLP+EVE ILKDLW NEA  C+L+ D Q  + S  E  RGYE+FFL ++LV PN+F
Sbjct: 285  GKKHLLPTEVESILKDLWNNEARFCMLLCDFQKNTLSEPEKRRGYEMFFLNSLLVAPNRF 344

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+  S+  G+MEHPQ+ LL+KVQ+AN+AL+     SN+ D++RRWMDLQRSVNVLYDS+
Sbjct: 345  RPSTNSSL-GMMEHPQSVLLSKVQEANLALQHHNASSNHMDVIRRWMDLQRSVNVLYDSS 403

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL KSEK ++GIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA 
Sbjct: 404  KGLVKSEKNAHGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFAT 463

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
            RLTYPE+VTPWN KKL+ A+ NGADIHPGATHY+D++  YKLQA    R+ +++ LP SR
Sbjct: 464  RLTYPEKVTPWNTKKLQEAIRNGADIHPGATHYRDKNNTYKLQAVPAKRHSVAKMLPASR 523

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
                Q G  P  +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GE+T+RMHY
Sbjct: 524  GSICQPGRDPNCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGERTLRMHY 583

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 584  ANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVDAN 619


>ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
            [Brachypodium distachyon]
          Length = 1868

 Score =  447 bits (1150), Expect = e-123
 Identities = 219/331 (66%), Positives = 260/331 (78%), Gaps = 1/331 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCR-SQSPMERGYEIFFLKAILVPPNKFRPAAA 814
            LL +EVE ILKDLW+NEA  C+L+ D Q   S S   RGYE+FFLK++LV PN+FRP+ +
Sbjct: 503  LLATEVESILKDLWENEARFCMLLCDFQQNLSVSEKRRGYEMFFLKSLLVTPNRFRPSTS 562

Query: 813  STARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGK 634
            S+  G+MEHPQN LL KVQ+AN+A++      N+ DI+ RW DLQ SVN+ YDS+KG G 
Sbjct: 563  SSL-GIMEHPQNVLLGKVQEANLAVQHDKAHPNHMDIITRWRDLQTSVNLFYDSSKGFGN 621

Query: 633  SEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP 454
             + + NGIRQLL+KK G++RQKMMGKRVN +CR+VISPDP+LAVNEIGIPP  AL++TYP
Sbjct: 622  GDGDGNGIRQLLDKKGGVIRQKMMGKRVNHSCRTVISPDPFLAVNEIGIPPQAALKMTYP 681

Query: 453  ERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQ 274
            E V P N KKL+ A+ NG  IHPGATHYK    MYKLQ  +  R  I++ LP SR   +Q
Sbjct: 682  ENVMPCNAKKLQEAINNGCGIHPGATHYKVNKNMYKLQDDRSKRRAIAKMLPASRGSISQ 741

Query: 273  HGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCST 94
             G  P+ +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKTIRMHYANCST
Sbjct: 742  PGKDPKCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCST 801

Query: 93   YNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            YNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 802  YNADFDGDEMNVHFPQDEISRAEAMNIVDAN 832


>gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triticum urartu]
          Length = 1915

 Score =  447 bits (1149), Expect = e-123
 Identities = 221/333 (66%), Positives = 269/333 (80%), Gaps = 3/333 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQ---CRSQSPMERGYEIFFLKAILVPPNKFRPA 820
            LL +EVE ILKDLW+ EA  C+L+ D Q   C S+    RGYE+FFLK++LVPPN+FRP+
Sbjct: 515  LLATEVESILKDLWEKEARFCMLLCDFQKNLCVSEK--RRGYEMFFLKSMLVPPNRFRPS 572

Query: 819  AASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGL 640
              S+  G+MEHPQN +L+KVQ+AN+AL+    + N+ DIL RW DLQ SVN+ YDS+KGL
Sbjct: 573  TNSSL-GIMEHPQNVMLSKVQEANLALQH--DNPNHMDILTRWRDLQTSVNLFYDSSKGL 629

Query: 639  GKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLT 460
             KS+K+ +G+RQL++KK+GI+RQK+MGKRVN +CR+VISPDP+LAVNEIGIPP  A +LT
Sbjct: 630  VKSDKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRTVISPDPFLAVNEIGIPPAAASKLT 689

Query: 459  YPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVT 280
            YPE+VTPWN K LR A+ NGA+IHPGATHYK  + +YKLQA    R+  ++ L  SR   
Sbjct: 690  YPEKVTPWNAKNLRGAIRNGAEIHPGATHYKVNNNLYKLQADHSKRHPTAKTLLASRGSI 749

Query: 279  AQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANC 100
            +Q G  P  +FE KVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTIRMHYANC
Sbjct: 750  SQPGKDPRCEFESKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHYANC 809

Query: 99   STYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            STYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 810  STYNADFDGDEMNVHFPQDEISRAEAINIVDAN 842


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  443 bits (1139), Expect = e-122
 Identities = 225/334 (67%), Positives = 264/334 (79%), Gaps = 4/334 (1%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDL--QCRSQSPMERGYEIFFLKAILVPPNKFRPAA 817
            LLPSEV  I++ LW+NEA+LC  + D+  +    S  + GY +FFL+ ILVPP KFRP +
Sbjct: 293  LLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPS 352

Query: 816  ASTARGVMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGL 640
                  VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     
Sbjct: 353  KGQI-SVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAA 411

Query: 639  GKSEKES-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 463
            G+ ++++ +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 412  GQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 471

Query: 462  TYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAV 283
            TYPE+VTPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V
Sbjct: 472  TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGV 531

Query: 282  TAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYAN 103
             AQ G   +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYAN
Sbjct: 532  VAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYAN 591

Query: 102  CSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            CSTYNADFDGDEMNVH PQDEISR+EA NI NAN
Sbjct: 592  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 625


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  443 bits (1139), Expect = e-122
 Identities = 225/334 (67%), Positives = 264/334 (79%), Gaps = 4/334 (1%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDL--QCRSQSPMERGYEIFFLKAILVPPNKFRPAA 817
            LLPSEV  I++ LW+NEA+LC  + D+  +    S  + GY +FFL+ ILVPP KFRP +
Sbjct: 364  LLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPS 423

Query: 816  ASTARGVMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGL 640
                  VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     
Sbjct: 424  KGQI-SVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAA 482

Query: 639  GKSEKES-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 463
            G+ ++++ +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 483  GQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 542

Query: 462  TYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAV 283
            TYPE+VTPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V
Sbjct: 543  TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGV 602

Query: 282  TAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYAN 103
             AQ G   +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYAN
Sbjct: 603  VAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYAN 662

Query: 102  CSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            CSTYNADFDGDEMNVH PQDEISR+EA NI NAN
Sbjct: 663  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 696


>gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegilops tauschii]
          Length = 1717

 Score =  436 bits (1121), Expect = e-120
 Identities = 220/363 (60%), Positives = 272/363 (74%), Gaps = 33/363 (9%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQ---CRSQSPMERGYEIFFLKAILVPPNKFRPA 820
            LL +EVE ILKDLW+ EA  C+L+ D Q   C S+    RGYE+FFLK++LVPPN+FRP+
Sbjct: 215  LLTTEVESILKDLWEKEARFCMLLCDFQQNLCVSEK--RRGYEMFFLKSMLVPPNRFRPS 272

Query: 819  AASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGL 640
             +S+  G+MEHPQN +L+KVQ+AN+AL+  +   N+ D+L RW DLQ SVN+ YDS+KGL
Sbjct: 273  TSSSL-GIMEHPQNVMLSKVQEANLALQHDSAHPNHMDVLTRWRDLQTSVNLFYDSSKGL 331

Query: 639  GKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLT 460
            GKS K+ +G+RQL++KK+GI+RQK+MGKRVN +CR+VISPDP+LAVNEIGIPP  AL+LT
Sbjct: 332  GKSGKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRTVISPDPFLAVNEIGIPPAAALKLT 391

Query: 459  YPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVT 280
            YPE+VTPWN KKL+ A+ NG++IHPGATH K  ++ YKLQ  +  R  I++ L  SR   
Sbjct: 392  YPEKVTPWNAKKLQGAISNGSEIHPGATHLKVNNQKYKLQDERTKRRGIAKMLAASRGSI 451

Query: 279  AQHGMGPESDFEGKVVYRHLQDGDIVLVNRQ----------------------------- 187
            +Q G  P+ +FE KVVYRH+QDGDIVLVNRQ                             
Sbjct: 452  SQPGKDPKCEFESKVVYRHIQDGDIVLVNRQSSTYKSIVGLLRYMQNIFFISWFHLNVKT 511

Query: 186  -PTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHLPQDEISRSEALNIA 10
             PTLHKPSMMAHVVRVL GEKTIRMHYANCSTYNADFDGDEMNVH PQDEISR+EA+NI 
Sbjct: 512  MPTLHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIV 571

Query: 9    NAN 1
            +AN
Sbjct: 572  DAN 574


>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  431 bits (1109), Expect = e-118
 Identities = 216/336 (64%), Positives = 258/336 (76%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1002 GPNHLLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPME--RGYEIFFLKAILVPPNKF 829
            G  HLL +EVE ILKDLWK EA  C+L+ D Q  + S  E  RGYE+FFLK +LV PN+F
Sbjct: 377  GKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRF 436

Query: 828  RPAAASTARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDST 649
            RP+ +S+  G+MEHPQN LL+KVQ++N+AL+     SN+ ++LRRWMDLQR+VNVLYDS+
Sbjct: 437  RPSISSSL-GIMEHPQNVLLSKVQESNLALQQSIAASNHMEVLRRWMDLQRNVNVLYDSS 495

Query: 648  KGLGKSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL 469
            KGL K+EK +NGIRQLLEKK GILRQKMMGKRVN+ACR                  Y   
Sbjct: 496  KGLSKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRF-----------------YIIS 538

Query: 468  RLTYPERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSR 289
             L + ++VTPWN +KL+ A+ NGADIHPGATHY+D + MYKLQA+   R  I++ LP SR
Sbjct: 539  ILFHVQKVTPWNARKLQEAINNGADIHPGATHYRDNNNMYKLQAAPPKRRAIAKMLPASR 598

Query: 288  AVTAQHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHY 109
               +Q G  P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GEKTIRMHY
Sbjct: 599  GSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHY 658

Query: 108  ANCSTYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            ANCSTYNADFDGDEMNVH PQDEISR+EA+NI +AN
Sbjct: 659  ANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 694


>gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  426 bits (1094), Expect = e-117
 Identities = 218/332 (65%), Positives = 259/332 (78%), Gaps = 2/332 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAAS 811
            LLPSEV+ I K LW+NE +LC ++ D+Q +     + GY +FFL+ ILVPP KFR A   
Sbjct: 11   LLPSEVKKITKLLWENEVELCSIISDIQQQGFGK-KVGYSMFFLETILVPPIKFR-APTK 68

Query: 810  TARGVMEHPQNTLLNKVQQANIALKSCTGDS--NNTDILRRWMDLQRSVNVLYDSTKGLG 637
                VMEHPQ  LL+KV QANI+L +   ++  ++  ++R WMDLQ+SVN+L+DS   + 
Sbjct: 69   GGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMS 128

Query: 636  KSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 457
            +    S+GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY
Sbjct: 129  QGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 188

Query: 456  PERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTA 277
            PERVTPWNV KLR A++NG++ HPGATHY D+    +L  S+  R  ISRKLP+SR   A
Sbjct: 189  PERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIA 248

Query: 276  QHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS 97
            Q G   + +FEGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS
Sbjct: 249  QPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCS 308

Query: 96   TYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            TYNADFDGDE+NVH PQDEISR+EA NI NAN
Sbjct: 309  TYNADFDGDEINVHFPQDEISRAEAYNIVNAN 340


>gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  426 bits (1094), Expect = e-117
 Identities = 218/332 (65%), Positives = 259/332 (78%), Gaps = 2/332 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAAS 811
            LLPSEV+ I K LW+NE +LC ++ D+Q +     + GY +FFL+ ILVPP KFR A   
Sbjct: 11   LLPSEVKKITKLLWENEVELCSIISDIQQQGFGK-KVGYSMFFLETILVPPIKFR-APTK 68

Query: 810  TARGVMEHPQNTLLNKVQQANIALKSCTGDS--NNTDILRRWMDLQRSVNVLYDSTKGLG 637
                VMEHPQ  LL+KV QANI+L +   ++  ++  ++R WMDLQ+SVN+L+DS   + 
Sbjct: 69   GGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMS 128

Query: 636  KSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 457
            +    S+GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY
Sbjct: 129  QGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 188

Query: 456  PERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTA 277
            PERVTPWNV KLR A++NG++ HPGATHY D+    +L  S+  R  ISRKLP+SR   A
Sbjct: 189  PERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIA 248

Query: 276  QHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS 97
            Q G   + +FEGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS
Sbjct: 249  QPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCS 308

Query: 96   TYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            TYNADFDGDE+NVH PQDEISR+EA NI NAN
Sbjct: 309  TYNADFDGDEINVHFPQDEISRAEAYNIVNAN 340


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  426 bits (1094), Expect = e-117
 Identities = 218/332 (65%), Positives = 259/332 (78%), Gaps = 2/332 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAAS 811
            LLPSEV+ I K LW+NE +LC ++ D+Q +     + GY +FFL+ ILVPP KFR A   
Sbjct: 303  LLPSEVKKITKLLWENEVELCSIISDIQQQGFGK-KVGYSMFFLETILVPPIKFR-APTK 360

Query: 810  TARGVMEHPQNTLLNKVQQANIALKSCTGDS--NNTDILRRWMDLQRSVNVLYDSTKGLG 637
                VMEHPQ  LL+KV QANI+L +   ++  ++  ++R WMDLQ+SVN+L+DS   + 
Sbjct: 361  GGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMS 420

Query: 636  KSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 457
            +    S+GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY
Sbjct: 421  QGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 480

Query: 456  PERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTA 277
            PERVTPWNV KLR A++NG++ HPGATHY D+    +L  S+  R  ISRKLP+SR   A
Sbjct: 481  PERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIA 540

Query: 276  QHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS 97
            Q G   + +FEGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS
Sbjct: 541  QPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCS 600

Query: 96   TYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            TYNADFDGDE+NVH PQDEISR+EA NI NAN
Sbjct: 601  TYNADFDGDEINVHFPQDEISRAEAYNIVNAN 632


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  426 bits (1094), Expect = e-117
 Identities = 218/332 (65%), Positives = 259/332 (78%), Gaps = 2/332 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAAS 811
            LLPSEV+ I K LW+NE +LC ++ D+Q +     + GY +FFL+ ILVPP KFR A   
Sbjct: 303  LLPSEVKKITKLLWENEVELCSIISDIQQQGFGK-KVGYSMFFLETILVPPIKFR-APTK 360

Query: 810  TARGVMEHPQNTLLNKVQQANIALKSCTGDS--NNTDILRRWMDLQRSVNVLYDSTKGLG 637
                VMEHPQ  LL+KV QANI+L +   ++  ++  ++R WMDLQ+SVN+L+DS   + 
Sbjct: 361  GGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMS 420

Query: 636  KSEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 457
            +    S+GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY
Sbjct: 421  QGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 480

Query: 456  PERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTA 277
            PERVTPWNV KLR A++NG++ HPGATHY D+    +L  S+  R  ISRKLP+SR   A
Sbjct: 481  PERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIA 540

Query: 276  QHGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS 97
            Q G   + +FEGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS
Sbjct: 541  QPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCS 600

Query: 96   TYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            TYNADFDGDE+NVH PQDEISR+EA NI NAN
Sbjct: 601  TYNADFDGDEINVHFPQDEISRAEAYNIVNAN 632


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  423 bits (1088), Expect = e-116
 Identities = 220/349 (63%), Positives = 261/349 (74%), Gaps = 22/349 (6%)
 Frame = -3

Query: 981  SEVELILKDLWKNEADLCLLMLDL--QCRSQSPMERGYEIFFLKAILVPPNKFRPAAAST 808
            ++V  I++ LW+NEA+LC  + D+  +    S  + GY +FFL+ ILVPP KFRP +   
Sbjct: 415  TKVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQ 474

Query: 807  ARGVMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKS 631
               VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     G+ 
Sbjct: 475  I-SVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQG 533

Query: 630  EKES-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP 454
            ++++ +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP
Sbjct: 534  QRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP 593

Query: 453  ERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQ 274
            E+VTPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V AQ
Sbjct: 594  EKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQ 653

Query: 273  HGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANC-- 100
             G   +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANC  
Sbjct: 654  PGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRV 713

Query: 99   ----------------STYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
                            STYNADFDGDEMNVH PQDEISR+EA NI NAN
Sbjct: 714  ESEHISMLDLDDCSDSSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 762


>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  422 bits (1086), Expect = e-116
 Identities = 208/326 (63%), Positives = 256/326 (78%), Gaps = 1/326 (0%)
 Frame = -3

Query: 975  VELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAASTARGV 796
            V+ I++ LW+NE+ LC  + D+QC+ ++    GY +FFL+ +LVPP KFRP +      V
Sbjct: 212  VKEIIRLLWENESQLCSFISDIQCQ-ETGTNGGYSMFFLETVLVPPIKFRPPSKG-GDSV 269

Query: 795  MEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKESN 616
            MEHPQ  LL+KV +AN++L     +  ++ I+RRW DLQ S+NV+++S    G+ ++++ 
Sbjct: 270  MEHPQTVLLSKVLEANVSLSQTLTNLEHSRIIRRWRDLQESINVMFNSKTAAGQGQRDAA 329

Query: 615  -GIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 439
             GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA RLTYPERVTP
Sbjct: 330  PGICQLLEKKEGLFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFATRLTYPERVTP 389

Query: 438  WNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMGP 259
            WNV KLR A++NG++IHPGAT Y D+     L+ ++  R  ISRKLP+S+    QHG G 
Sbjct: 390  WNVDKLRNAIVNGSEIHPGATQYVDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKGS 449

Query: 258  ESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNADF 79
            ++D E K+V+RHL+DGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCSTYNADF
Sbjct: 450  DNDIESKIVHRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADF 509

Query: 78   DGDEMNVHLPQDEISRSEALNIANAN 1
            DGDEMNVH PQDEISRSEA NI NAN
Sbjct: 510  DGDEMNVHFPQDEISRSEAYNIVNAN 535


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  422 bits (1086), Expect = e-116
 Identities = 213/332 (64%), Positives = 256/332 (77%), Gaps = 2/332 (0%)
 Frame = -3

Query: 990  LLPSEVELILKDLWKNEADLCLLMLDLQCRSQSPMERGYEIFFLKAILVPPNKFRPAAAS 811
            LLPSEV+  L+ LWKNEA +C  + DLQ +     + G  +FFL+ ILVPP KFRP    
Sbjct: 295  LLPSEVKEKLELLWKNEARICSFISDLQQQEFGKRKAGPAMFFLETILVPPIKFRPPTKG 354

Query: 810  TARGVMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKS 631
                VMEHPQ  LL+KV Q+NI+L     +  ++ I+RRW+DLQ+S+N L+DS    G  
Sbjct: 355  -GDSVMEHPQTVLLSKVLQSNISLGDAHINKEHSKIVRRWLDLQQSINTLFDSKTAKGPG 413

Query: 630  EKE-SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP 454
            ++E + GI QLLEKK G+ RQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FA++LTYP
Sbjct: 414  QREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYP 473

Query: 453  ERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQ 274
            ERVTPWN+ KLR AV+NG++ HPGATHY D+  + KL  ++  R  ISRKLP+SR    Q
Sbjct: 474  ERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQ 533

Query: 273  HGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS- 97
             G G E +FEGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCS 
Sbjct: 534  AGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSI 593

Query: 96   TYNADFDGDEMNVHLPQDEISRSEALNIANAN 1
            TYNADFDGDEMNVH PQDE+SR+EA NI NAN
Sbjct: 594  TYNADFDGDEMNVHFPQDEVSRAEAYNIVNAN 625