BLASTX nr result
ID: Zingiber24_contig00007030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00007030
(624 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004956188.1| PREDICTED: pentatricopeptide repeat-containi... 103 4e-20
dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 5e-20
ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
gb|EMS49071.1| hypothetical protein TRIUR3_09168 [Triticum urartu] 100 6e-19
ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containi... 100 6e-19
gb|EMT24513.1| hypothetical protein F775_06744 [Aegilops tauschii] 99 8e-19
ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|... 99 8e-19
ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [S... 98 2e-18
ref|XP_006644208.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group] g... 97 5e-18
gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indi... 96 6e-18
ref|XP_006837175.1| hypothetical protein AMTR_s00105p00044870 [A... 93 7e-17
ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Caps... 91 2e-16
gb|EOY00910.1| Pentatricopeptide repeat-containing protein, puta... 91 4e-16
ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Popu... 90 6e-16
ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ... 88 2e-15
gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis] 88 2e-15
ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-15
emb|CBI26924.3| unnamed protein product [Vitis vinifera] 87 4e-15
>ref|XP_004956188.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Setaria italica]
Length = 557
Score = 103 bits (257), Expect = 4e-20
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 485 CMHMFSALINGLCFENRLEEACAYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMA 544
Query: 444 LELDQLRNTPLHG 406
L+LD LR TPL G
Sbjct: 545 LKLDALRKTPLRG 557
>dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 103 bits (256), Expect = 5e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLDRGIRPPGQL+S +K+ L++GGR LA
Sbjct: 493 CMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMA 552
Query: 444 LELDQLRNTPL 412
L+LD+LR TP+
Sbjct: 553 LKLDELRKTPM 563
>ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 101 bits (252), Expect = 2e-19
Identities = 45/73 (61%), Positives = 56/73 (76%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS++ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 475 CMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMA 534
Query: 444 LELDQLRNTPLHG 406
L+LD LR TP G
Sbjct: 535 LKLDTLRKTPFRG 547
>gb|EMS49071.1| hypothetical protein TRIUR3_09168 [Triticum urartu]
Length = 534
Score = 99.8 bits (247), Expect = 6e-19
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 462 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQEMA 521
Query: 444 LELDQLRNTPL 412
L+LD LR TP+
Sbjct: 522 LKLDGLRKTPM 532
>ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 515
Score = 99.8 bits (247), Expect = 6e-19
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFST+IN C N+LD+ CRYFQ+MLD GIRPP QL+S +K LLD GR+D I FGL
Sbjct: 442 MHMFSTLINTLCHENKLDEACRYFQDMLDMGIRPPTQLFSNLKQALLDDGRKDAVISFGL 501
Query: 441 ELDQLRNTPL 412
++++LR TPL
Sbjct: 502 KIEKLRKTPL 511
>gb|EMT24513.1| hypothetical protein F775_06744 [Aegilops tauschii]
Length = 539
Score = 99.4 bits (246), Expect = 8e-19
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 467 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRVSLAQEMD 526
Query: 444 LELDQLRNTPL 412
L+LD LR TP+
Sbjct: 527 LKLDGLRKTPM 537
>ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|gb|ACG28835.1| GTP
binding protein [Zea mays] gi|413952711|gb|AFW85360.1|
GTP binding protein [Zea mays]
Length = 547
Score = 99.4 bits (246), Expect = 8e-19
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L+ GGR LA
Sbjct: 475 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEVA 534
Query: 444 LELDQLRNTPLHG 406
L+LD +R TP G
Sbjct: 535 LKLDAIRKTPFRG 547
>ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein
SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 98.2 bits (243), Expect = 2e-18
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 479 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMA 538
Query: 444 LELDQLRNTPLHG 406
+LD +R TP G
Sbjct: 539 SKLDAIRKTPFRG 551
>ref|XP_006644208.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Oryza brachyantha]
Length = 539
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L GGR LA
Sbjct: 467 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALEGGGRISLAQEMA 526
Query: 444 LELDQLRNTPLHG 406
+LD LR TP+ G
Sbjct: 527 QKLDMLRKTPMRG 539
>ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza
sativa Japonica Group] gi|125570544|gb|EAZ12059.1|
hypothetical protein OsJ_01942 [Oryza sativa Japonica
Group]
Length = 540
Score = 96.7 bits (239), Expect = 5e-18
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 468 CMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVT 527
Query: 444 LELDQLRNTPLHG 406
L+ LR TP+ G
Sbjct: 528 QRLEMLRRTPMRG 540
>gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 96.3 bits (238), Expect = 6e-18
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMHMFS +ING C NRL++ C YFQEMLD+GIRPPGQL+S +K+ L++GGR LA
Sbjct: 468 CMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVT 527
Query: 444 LELDQLRNTPLHG 406
L+ LR TP+ G
Sbjct: 528 QRLEMLRRTPMRG 540
>ref|XP_006837175.1| hypothetical protein AMTR_s00105p00044870 [Amborella trichopoda]
gi|548839772|gb|ERN00029.1| hypothetical protein
AMTR_s00105p00044870 [Amborella trichopoda]
Length = 522
Score = 92.8 bits (229), Expect = 7e-17
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = -1
Query: 624 CMHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFG 445
CMH++S +I G C NRLD+ C+YF EMLD GIRPPGQ++ ++K LLD G+++LA+
Sbjct: 448 CMHLYSALICGLCDENRLDEACKYFLEMLDMGIRPPGQMFGRLKQCLLDDGKKELALDLS 507
Query: 444 LELDQLRNTPLHG 406
L LD++R P G
Sbjct: 508 LRLDRVRRIPFSG 520
>ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Capsella rubella]
gi|482570283|gb|EOA34471.1| hypothetical protein
CARUB_v10022011mg [Capsella rubella]
Length = 512
Score = 91.3 bits (225), Expect = 2e-16
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFS++I C N+LD+ C YF EMLD GIRPPGQ++S++K TLLD GR+D + +
Sbjct: 441 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGQMFSRLKQTLLDEGRKDKVVELAV 500
Query: 441 ELDQLRNTPLHG 406
++D+LR T L G
Sbjct: 501 KMDRLRKTQLVG 512
>gb|EOY00910.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508709014|gb|EOY00911.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 545
Score = 90.5 bits (223), Expect = 4e-16
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFS +IN C ++LDD C+YFQEMLD GIRPP +++S +K LLD G++D A++
Sbjct: 471 MHMFSDLINSLCHNSKLDDACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKKDTALNLAR 530
Query: 441 ELDQLRNTPLHG*G 400
++D+LR PL G G
Sbjct: 531 KIDKLRKMPLVGEG 544
>ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Populus trichocarpa]
gi|550329653|gb|EEF02066.2| hypothetical protein
POPTR_0010s12490g [Populus trichocarpa]
Length = 488
Score = 89.7 bits (221), Expect = 6e-16
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFST+IN C ++LD+ C YFQEMLD GIRPP QL+S +K LLD G++D + F
Sbjct: 417 MHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFER 476
Query: 441 ELDQLRNTPL 412
+LD+LR PL
Sbjct: 477 KLDKLRKAPL 486
>ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Citrus sinensis]
Length = 537
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHM+ST+IN C ++LDD C+YFQEMLD GIRPPGQL+S +K L D G + A+
Sbjct: 463 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 522
Query: 441 ELDQLRNTPL 412
++D+LR TPL
Sbjct: 523 KIDKLRKTPL 532
>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334660|gb|EFH65078.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 512
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFS++I C N+LD+ C YF EMLD GIRPPG L+S++K TLLD GR+D +
Sbjct: 441 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAV 500
Query: 441 ELDQLRNTPLHG 406
++D+LR T L G
Sbjct: 501 KMDRLRKTQLVG 512
>gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]
Length = 551
Score = 87.8 bits (216), Expect = 2e-15
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFST+IN C ++LDD C+YFQEM+D GIRPP QLYS +K LLD GR D+
Sbjct: 480 MHMFSTLINSLCMEDKLDDACKYFQEMMDMGIRPPAQLYSNLKQALLDEGREDMVQTLYE 539
Query: 441 ELDQLRNTPLHG 406
+++LR T L G
Sbjct: 540 RIEKLRKTSLVG 551
>ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 87.8 bits (216), Expect = 2e-15
Identities = 36/70 (51%), Positives = 54/70 (77%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFST++ C ++LD+ C+YFQEMLD GIRPP +++S +K+ L+D G +A+HF L
Sbjct: 436 MHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGMEHVAMHFTL 495
Query: 441 ELDQLRNTPL 412
++D+LR +PL
Sbjct: 496 KIDKLRKSPL 505
>emb|CBI26924.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 87.0 bits (214), Expect = 4e-15
Identities = 37/72 (51%), Positives = 52/72 (72%)
Frame = -1
Query: 621 MHMFSTMINGFCSMNRLDDVCRYFQEMLDRGIRPPGQLYSKVKDTLLDGGRRDLAIHFGL 442
MHMFST+IN C N+LD+ C+YF EMLD GIRPP ++S +K TLLD G++D+ +
Sbjct: 144 MHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQ 203
Query: 441 ELDQLRNTPLHG 406
+LD++R T + G
Sbjct: 204 KLDKIRTTQVIG 215