BLASTX nr result

ID: Zingiber24_contig00006977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00006977
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452659.1| hypothetical protein SORBIDRAFT_04g030110 [S...    57   5e-06

>ref|XP_002452659.1| hypothetical protein SORBIDRAFT_04g030110 [Sorghum bicolor]
           gi|241932490|gb|EES05635.1| hypothetical protein
           SORBIDRAFT_04g030110 [Sorghum bicolor]
          Length = 259

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
 Frame = +1

Query: 91  MGCYP-LGKMVAKVFDKCKGRKR----RGIATTMVXXXXXXXXXARSVAKHVTFSTDHAV 255
           MGCYP LGK V+K   KC GR+R    R      +          R VA+ VTF++++++
Sbjct: 1   MGCYPPLGKFVSKALGKCNGRQRWREGRLDFDYALAYPPTETHYMRPVARTVTFASNNSI 60

Query: 256 -VMPPDTVQMVPPVSKHHHPGPAILPSPQAEMAQSNEQCRVRFTPES-------TTQHGE 411
            V+PP +    P   + + P P     PQ       EQ   +  PES       TT+  E
Sbjct: 61  YVIPPSSPPPQPQPQQQNAPEP---QQPQTPPGHEPEQQHQQDPPESQPPPQPQTTEQPE 117

Query: 412 IPNPPR-----APRSKQPRFPVEQDHQAADGFAHP----LRREPPQFRDDTANRNEPP-- 558
            P+PP      AP     R   +Q  +   G   P     ++E  Q +    N  +PP  
Sbjct: 118 QPDPPAQTQDDAPPKGPKRGKKKQPGRVRFGPEPPPPPQQQQEQEQAQQSPGNIEKPPDH 177

Query: 559 -PTYTASPLP 585
            P + A+P P
Sbjct: 178 GPPHGAAPAP 187


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