BLASTX nr result
ID: Zingiber24_contig00006953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00006953
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302470.1| zinc finger family protein [Populus trichoca... 144 2e-32
ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|5... 139 3e-31
emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera] 139 4e-31
ref|XP_004499119.1| PREDICTED: RING finger protein 5-like [Cicer... 138 9e-31
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484... 137 1e-30
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510... 137 2e-30
gb|ESW08560.1| hypothetical protein PHAVU_009G055700g [Phaseolus... 135 4e-30
ref|XP_003528194.1| PREDICTED: RING finger protein 5 isoform 2 [... 135 4e-30
ref|XP_002533271.1| rnf5, putative [Ricinus communis] gi|2235268... 135 7e-30
ref|XP_003523865.1| PREDICTED: RING finger protein 5-like isofor... 134 1e-29
gb|AFK65745.1| C3HC4 transcription factor [Gossypium hirsutum] 134 2e-29
gb|EOY14676.1| RING/U-box superfamily protein [Theobroma cacao] 133 2e-29
gb|ACU16582.1| unknown [Glycine max] 133 3e-29
ref|XP_006473447.1| PREDICTED: RING finger protein 5-like isofor... 131 1e-28
ref|XP_006434924.1| hypothetical protein CICLE_v10002367mg [Citr... 131 1e-28
gb|ACU19464.1| unknown [Glycine max] 130 2e-28
gb|AGV54634.1| vulgaris E3 ubiquitin-protein ligase RMA1 isoform... 129 5e-28
gb|EMJ24382.1| hypothetical protein PRUPE_ppa009193mg [Prunus pe... 129 5e-28
gb|EMJ03735.1| hypothetical protein PRUPE_ppa011052mg [Prunus pe... 127 2e-27
gb|EXB77876.1| RING finger protein 5 [Morus notabilis] 126 3e-27
>ref|XP_002302470.1| zinc finger family protein [Populus trichocarpa]
gi|222844196|gb|EEE81743.1| zinc finger family protein
[Populus trichocarpa]
Length = 227
Score = 144 bits (362), Expect = 2e-32
Identities = 62/80 (77%), Positives = 70/80 (87%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES +SR P NS+F+ NNGN DAGNFECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H++S ECPVCKA+VEE
Sbjct: 59 WLHFHSKSRECPVCKALVEE 78
>ref|XP_002326898.1| predicted protein [Populus trichocarpa]
gi|566202365|ref|XP_006375056.1| zinc finger family
protein [Populus trichocarpa]
gi|550323370|gb|ERP52853.1| zinc finger family protein
[Populus trichocarpa]
Length = 228
Score = 139 bits (351), Expect = 3e-31
Identities = 60/80 (75%), Positives = 69/80 (86%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
MGSG GES S PQN +F+ +NGN DAG+FECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MGSGFGESTSGV--PQNPSFTSSNGNGDAGDFECNICFDLAQDPIVTLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H++S ECPVCKA+VEE
Sbjct: 59 WLHFHSKSRECPVCKALVEE 78
>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
Length = 232
Score = 139 bits (350), Expect = 4e-31
Identities = 63/81 (77%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNG-NSDAGNFECNICFELAQDPVVTLCGHLFCWPCLY 66
M SG GES +SR PQ+ +FS NNG NSDAGNFECNICF+LAQDP+VTLCGHLFCWPCLY
Sbjct: 1 MTSGFGES--TSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLY 58
Query: 65 KWLHGHAQSSECPVCKAIVEE 3
KWLH H+ S ECPVCKA+VEE
Sbjct: 59 KWLHIHSHSQECPVCKALVEE 79
>ref|XP_004499119.1| PREDICTED: RING finger protein 5-like [Cicer arietinum]
Length = 229
Score = 138 bits (347), Expect = 9e-31
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES +SR P + +S NN N+DAGNFECNICF+LAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TSRSPPSPPYSSNNNNNDAGNFECNICFDLAQDPIITLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA++EE
Sbjct: 59 WLHFHSQSRECPVCKAMIEE 78
>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
[Lotus japonicus]
Length = 228
Score = 137 bits (345), Expect = 1e-30
Identities = 60/80 (75%), Positives = 70/80 (87%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES +SR P + +++GNN NSDAGNFECNICF+LAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TSRSPPSPSYAGNN-NSDAGNFECNICFDLAQDPIITLCGHLFCWPCLYK 57
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 58 WLHFHSQSRECPVCKALVEE 77
>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
putative [Ricinus communis]
Length = 229
Score = 137 bits (344), Expect = 2e-30
Identities = 60/81 (74%), Positives = 66/81 (81%)
Frame = -1
Query: 245 LMGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLY 66
+ SG GES SR PQ+ FS N N DAGNFECNICF+LAQDP+VTLCGHLFCWPCLY
Sbjct: 1 MASSGFGES---SRPPQSPQFSSNYSNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLY 57
Query: 65 KWLHGHAQSSECPVCKAIVEE 3
KWLH H+QS ECPVCKA+VEE
Sbjct: 58 KWLHFHSQSKECPVCKALVEE 78
>gb|ESW08560.1| hypothetical protein PHAVU_009G055700g [Phaseolus vulgaris]
Length = 229
Score = 135 bits (341), Expect = 4e-30
Identities = 59/80 (73%), Positives = 66/80 (82%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES S P S F+ NN ++DAGNFECNICFELAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGESTGRS-PPSPSYFNNNNNSNDAGNFECNICFELAQDPIITLCGHLFCWPCLYK 59
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 60 WLHFHSQSRECPVCKALVEE 79
>ref|XP_003528194.1| PREDICTED: RING finger protein 5 isoform 2 [Glycine max]
Length = 231
Score = 135 bits (341), Expect = 4e-30
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES + R P + ++ NN NSDA NFECNICFELAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TGRSPPSPSYFNNNNNSDAANFECNICFELAQDPIITLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 59 WLHFHSQSRECPVCKALVEE 78
>ref|XP_002533271.1| rnf5, putative [Ricinus communis] gi|223526896|gb|EEF29103.1| rnf5,
putative [Ricinus communis]
Length = 233
Score = 135 bits (339), Expect = 7e-30
Identities = 59/82 (71%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNS--DAGNFECNICFELAQDPVVTLCGHLFCWPCL 69
M SGIGES +S P++S+FSGNN N+ DAG+FECNICFELAQDP+VTLCGHLFCWPCL
Sbjct: 1 MASGIGES--TSLPPESSSFSGNNNNNANDAGDFECNICFELAQDPIVTLCGHLFCWPCL 58
Query: 68 YKWLHGHAQSSECPVCKAIVEE 3
Y+WLH H+ S ECPVCKA+++E
Sbjct: 59 YRWLHHHSHSHECPVCKALIQE 80
>ref|XP_003523865.1| PREDICTED: RING finger protein 5-like isoform 1 [Glycine max]
Length = 231
Score = 134 bits (338), Expect = 1e-29
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES + R P + ++ NN N+DA NFECNICFELAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TGRSPPSPSYFNNNNNNDAANFECNICFELAQDPIITLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 59 WLHFHSQSRECPVCKALVEE 78
>gb|AFK65745.1| C3HC4 transcription factor [Gossypium hirsutum]
Length = 236
Score = 134 bits (336), Expect = 2e-29
Identities = 59/80 (73%), Positives = 65/80 (81%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M S GES S S P N + S NN N DAGNFECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MASEFGESASHS--PHNPSCSTNNANGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H++S ECPVCKA+VEE
Sbjct: 59 WLHTHSRSQECPVCKALVEE 78
>gb|EOY14676.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 287
Score = 133 bits (335), Expect = 2e-29
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M G GES +SR PQ+ + S NN N DAGNFECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MAGGFGES--ASRSPQSPSCSSNNANGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WL+ H++S ECPVCKA++EE
Sbjct: 59 WLNIHSRSHECPVCKALIEE 78
>gb|ACU16582.1| unknown [Glycine max]
Length = 231
Score = 133 bits (334), Expect = 3e-29
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES + R P + ++ NN NSDA NFECNICFELAQ P++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TGRSPPSPSYFNNNNNSDAANFECNICFELAQGPIITLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 59 WLHFHSQSRECPVCKALVEE 78
>ref|XP_006473447.1| PREDICTED: RING finger protein 5-like isoform X1 [Citrus sinensis]
gi|568838924|ref|XP_006473448.1| PREDICTED: RING finger
protein 5-like isoform X2 [Citrus sinensis]
Length = 229
Score = 131 bits (329), Expect = 1e-28
Identities = 58/80 (72%), Positives = 65/80 (81%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M S GES +SR QN +S NN NS+AGNFECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MASSFGES--TSRSAQNP-YSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYK 57
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLHGH+ ECPVCKA +EE
Sbjct: 58 WLHGHSNYRECPVCKATIEE 77
>ref|XP_006434924.1| hypothetical protein CICLE_v10002367mg [Citrus clementina]
gi|567884733|ref|XP_006434925.1| hypothetical protein
CICLE_v10002367mg [Citrus clementina]
gi|557537046|gb|ESR48164.1| hypothetical protein
CICLE_v10002367mg [Citrus clementina]
gi|557537047|gb|ESR48165.1| hypothetical protein
CICLE_v10002367mg [Citrus clementina]
Length = 229
Score = 131 bits (329), Expect = 1e-28
Identities = 58/80 (72%), Positives = 65/80 (81%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M S GES +SR QN +S NN NS+AGNFECNICF+LAQDP+VTLCGHLFCWPCLYK
Sbjct: 1 MASSFGES--TSRSAQNP-YSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYK 57
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLHGH+ ECPVCKA +EE
Sbjct: 58 WLHGHSNYRECPVCKATIEE 77
>gb|ACU19464.1| unknown [Glycine max]
Length = 231
Score = 130 bits (326), Expect = 2e-28
Identities = 56/80 (70%), Positives = 65/80 (81%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES + R P + ++ NN N+DA NFE NICFELAQDP++TLCGHLFCWPCLYK
Sbjct: 1 MASGFGES--TGRSPPSPSYFNNNNNNDAANFERNICFELAQDPIITLCGHLFCWPCLYK 58
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+QS ECPVCKA+VEE
Sbjct: 59 WLHFHSQSRECPVCKALVEE 78
>gb|AGV54634.1| vulgaris E3 ubiquitin-protein ligase RMA1 isoform 1 [Phaseolus
vulgaris]
Length = 228
Score = 129 bits (323), Expect = 5e-28
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = -1
Query: 227 GESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYKWLHGH 48
G + ++ R P + ++ NN NSDA N ECNICFELAQDP++TLCGHLFCWPCLYKWLH H
Sbjct: 4 GSTATTGRSPPSPSYFTNNNNSDAANLECNICFELAQDPIITLCGHLFCWPCLYKWLHFH 63
Query: 47 AQSSECPVCKAIVEE 3
+QS ECPVCKA+VEE
Sbjct: 64 SQSRECPVCKALVEE 78
>gb|EMJ24382.1| hypothetical protein PRUPE_ppa009193mg [Prunus persica]
Length = 302
Score = 129 bits (323), Expect = 5e-28
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSG-NNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLY 66
M SG GES +SR Q ++S NN NSDAGNFECNIC +LAQDP+VTLCGHLFCWPCLY
Sbjct: 67 MASGFGES--TSRPSQGPSYSSSNNNNSDAGNFECNICLDLAQDPIVTLCGHLFCWPCLY 124
Query: 65 KWLHGHAQSSECPVCKAIVEE 3
KWLH H+ S ECPVCKA+++E
Sbjct: 125 KWLHIHSHSQECPVCKALIKE 145
>gb|EMJ03735.1| hypothetical protein PRUPE_ppa011052mg [Prunus persica]
gi|462398068|gb|EMJ03736.1| hypothetical protein
PRUPE_ppa011052mg [Prunus persica]
Length = 225
Score = 127 bits (318), Expect = 2e-27
Identities = 55/80 (68%), Positives = 66/80 (82%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES +S PQ+ + SGNN N D G+FECNICF+LAQDP++TLCGHLFCWPCLY+
Sbjct: 1 MASGFGES--TSVPPQSPSCSGNNAN-DVGDFECNICFDLAQDPIITLCGHLFCWPCLYR 57
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+ S ECPVCKA+V+E
Sbjct: 58 WLHHHSHSQECPVCKALVQE 77
>gb|EXB77876.1| RING finger protein 5 [Morus notabilis]
Length = 225
Score = 126 bits (317), Expect = 3e-27
Identities = 56/80 (70%), Positives = 67/80 (83%)
Frame = -1
Query: 242 MGSGIGESPSSSRDPQNSAFSGNNGNSDAGNFECNICFELAQDPVVTLCGHLFCWPCLYK 63
M SG GES +S PQ+ + SGN G +DAG+FECNICFELAQDP+VTLCGHLFCWPCLY+
Sbjct: 1 MASGFGES--TSVPPQSPSCSGN-GVNDAGDFECNICFELAQDPIVTLCGHLFCWPCLYR 57
Query: 62 WLHGHAQSSECPVCKAIVEE 3
WLH H+ S ECPVCKA+++E
Sbjct: 58 WLHHHSHSQECPVCKALIQE 77