BLASTX nr result

ID: Zingiber24_contig00006777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00006777
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339699.1| PREDICTED: protein SDE2 homolog [Solanum tub...    63   5e-08
ref|XP_004231217.1| PREDICTED: uncharacterized protein LOC101247...    63   5e-08
ref|XP_004969554.1| PREDICTED: protein SDE2 homolog [Setaria ita...    62   1e-07
ref|NP_001043881.1| Os01g0681600 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EAZ13103.1| hypothetical protein OsJ_03023 [Oryza sativa Japo...    58   1e-06

>ref|XP_006339699.1| PREDICTED: protein SDE2 homolog [Solanum tuberosum]
          Length = 483

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +3

Query: 3   EKYLEKYRADAEKCMEEVEESVRQSFALYNESKRKILPLSEPSSKRLKIWLG 158
           +KY++KYR D+ KCMEEV+ SVR+S   +  SKRK + L+E  SK+LKIW G
Sbjct: 193 DKYVQKYREDSAKCMEEVDRSVRESLKGFVSSKRKGVELNESESKKLKIWKG 244


>ref|XP_004231217.1| PREDICTED: uncharacterized protein LOC101247169 [Solanum
           lycopersicum]
          Length = 482

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +3

Query: 3   EKYLEKYRADAEKCMEEVEESVRQSFALYNESKRKILPLSEPSSKRLKIWLG 158
           +KY++KYR D+ KCMEEV+ SVR+S   +  SKRK + L+E  SK+LKIW G
Sbjct: 193 DKYVQKYREDSAKCMEEVDRSVRESLKGFVSSKRKGVELNESESKKLKIWKG 244


>ref|XP_004969554.1| PREDICTED: protein SDE2 homolog [Setaria italica]
          Length = 452

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 48/130 (36%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   EKYLEKYRADAEKCMEEVEESVRQSFALYNESKRKILPLSEP--SSKRLKIWLGXXXXXX 176
           +KYLEK+R DAE C+  VEESVR S       KRK  P   P   SK+L+IWLG      
Sbjct: 165 DKYLEKFRKDAEICVNAVEESVRASL-----GKRKTAPKPPPGADSKKLRIWLGKNKVED 219

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXVLDGGNCSI-QSELQVGGSPSGSVSINNSDVESSG 353
                                    VLD GNCS   S+        GSVS ++S+ ESSG
Sbjct: 220 DESDSDSDEDDEDREGDEGTDAKSIVLDDGNCSNGSSKSDDKKHDLGSVSGSHSEGESSG 279

Query: 354 GGSEKSNVDE 383
             S  ++ +E
Sbjct: 280 EKSGHNDSEE 289


>ref|NP_001043881.1| Os01g0681600 [Oryza sativa Japonica Group]
           gi|21644698|dbj|BAC01254.1| splicing factor-like [Oryza
           sativa Japonica Group] gi|113533412|dbj|BAF05795.1|
           Os01g0681600 [Oryza sativa Japonica Group]
           gi|125527270|gb|EAY75384.1| hypothetical protein
           OsI_03282 [Oryza sativa Indica Group]
          Length = 444

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3   EKYLEKYRADAEKCMEEVEESVRQSFALYNESKRKILPLSE--PSSKRLKIWLGXXXXXX 176
           +KYLEKYR DAE C+  VEESVR S       KRK +P       +K+LKIWLG      
Sbjct: 164 DKYLEKYRKDAESCVNAVEESVRASL-----GKRKTVPKPRGGEDAKKLKIWLG---KKK 215

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXVLDGGNCSIQSELQVGGSPSGSVSINNSDVESSGG 356
                                    +LD GN S  S+ +      GS++ + S+ E+SG 
Sbjct: 216 VQEDESDSDSDSEMDDDEGADTKSIILDDGNSSHGSKSEDEKVDLGSITESPSEGETSGE 275

Query: 357 GSEKSNVDEISTG 395
            S +S  +E   G
Sbjct: 276 KSGRSESEENGNG 288


>gb|EAZ13103.1| hypothetical protein OsJ_03023 [Oryza sativa Japonica Group]
          Length = 377

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3   EKYLEKYRADAEKCMEEVEESVRQSFALYNESKRKILPLSE--PSSKRLKIWLGXXXXXX 176
           +KYLEKYR DAE C+  VEESVR S       KRK +P       +K+LKIWLG      
Sbjct: 97  DKYLEKYRKDAESCVNAVEESVRASL-----GKRKTVPKPRGGEDAKKLKIWLG---KKK 148

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXVLDGGNCSIQSELQVGGSPSGSVSINNSDVESSGG 356
                                    +LD GN S  S+ +      GS++ + S+ E+SG 
Sbjct: 149 VQEDESDSDSDSEMDDDEGADTKSIILDDGNSSHGSKSEDEKVDLGSITESPSEGETSGE 208

Query: 357 GSEKSNVDEISTG 395
            S +S  +E   G
Sbjct: 209 KSGRSESEENGNG 221


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