BLASTX nr result
ID: Zingiber24_contig00006688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00006688
(711 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT16536.1| Pumilio-like protein [Aegilops tauschii] 90 6e-16
gb|EMS58316.1| Pumilio-like protein 4 [Triticum urartu] 90 6e-16
ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypod... 90 8e-16
ref|XP_006649176.1| PREDICTED: pumilio homolog 1-like [Oryza bra... 89 1e-15
dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group] gi|12... 88 3e-15
ref|XP_006409965.1| hypothetical protein EUTSA_v10016189mg [Eutr... 86 9e-15
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera... 86 9e-15
ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria i... 86 1e-14
ref|XP_004954394.1| PREDICTED: pumilio homolog 1-like isoform X1... 86 2e-14
gb|ADE77507.1| unknown [Picea sitchensis] 86 2e-14
ref|XP_006846288.1| hypothetical protein AMTR_s00012p00251030 [A... 85 2e-14
ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza bra... 84 3e-14
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr... 84 3e-14
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao] 84 3e-14
ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [S... 84 3e-14
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 84 3e-14
emb|CBI16096.3| unnamed protein product [Vitis vinifera] 84 3e-14
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera] 84 3e-14
ref|XP_006409963.1| hypothetical protein EUTSA_v10016185mg [Eutr... 84 5e-14
gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays] 84 5e-14
>gb|EMT16536.1| Pumilio-like protein [Aegilops tauschii]
Length = 959
Score = 90.1 bits (222), Expect = 6e-16
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSSR 559
ETCDD NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER IGVSS+
Sbjct: 905 ETCDDHNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGVSSQ 955
>gb|EMS58316.1| Pumilio-like protein 4 [Triticum urartu]
Length = 1052
Score = 90.1 bits (222), Expect = 6e-16
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSSR 559
ETCDD NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER IGVSS+
Sbjct: 998 ETCDDHNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGVSSQ 1048
>ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 89.7 bits (221), Expect = 8e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER IGVSS
Sbjct: 956 ETCDDHNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGVSS 1005
>ref|XP_006649176.1| PREDICTED: pumilio homolog 1-like [Oryza brachyantha]
Length = 1001
Score = 89.0 bits (219), Expect = 1e-15
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER IG+SS
Sbjct: 949 ETCDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGMSS 998
>dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein
OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein
OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 87.8 bits (216), Expect = 3e-15
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER GVSS
Sbjct: 949 ETCDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRSGVSS 998
>ref|XP_006409965.1| hypothetical protein EUTSA_v10016189mg [Eutrema salsugineum]
gi|567209977|ref|XP_006409966.1| hypothetical protein
EUTSA_v10016189mg [Eutrema salsugineum]
gi|557111134|gb|ESQ51418.1| hypothetical protein
EUTSA_v10016189mg [Eutrema salsugineum]
gi|557111135|gb|ESQ51419.1| hypothetical protein
EUTSA_v10016189mg [Eutrema salsugineum]
Length = 969
Score = 86.3 bits (212), Expect = 9e-15
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGV 568
ETCDD+ REHIL+RIKVHLN LKKYTYGKHIVARVEKL+A GER +G+
Sbjct: 917 ETCDDQQREHILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMGL 964
>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product
[Vitis vinifera]
Length = 1026
Score = 86.3 bits (212), Expect = 9e-15
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+ RE ILSRIKVHLN LK+YTYGKHIV+RVEKLIATGER +G+SS
Sbjct: 973 ETCDDQTRELILSRIKVHLNTLKRYTYGKHIVSRVEKLIATGERRMGLSS 1022
>ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria italica]
Length = 1056
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSSR 559
ETCDD+ RE ILSR+KVHLN LKKYTYGKHIVARVEKL+A GER IG+ S+
Sbjct: 1003 ETCDDQQRELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIGLQSQ 1053
>ref|XP_004954394.1| PREDICTED: pumilio homolog 1-like isoform X1 [Setaria italica]
gi|514720078|ref|XP_004954395.1| PREDICTED: pumilio
homolog 1-like isoform X2 [Setaria italica]
Length = 998
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
E CDD+NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER +GV S
Sbjct: 947 EICDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRVGVPS 996
>gb|ADE77507.1| unknown [Picea sitchensis]
Length = 82
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+ RE ILSRIKVHLN LKKYTYGKHIVARVEKL+A GER IG S
Sbjct: 29 ETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGTQS 78
>ref|XP_006846288.1| hypothetical protein AMTR_s00012p00251030 [Amborella trichopoda]
gi|548849058|gb|ERN07963.1| hypothetical protein
AMTR_s00012p00251030 [Amborella trichopoda]
Length = 1019
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETC+D+ RE ILSRIKVHLN LKKYTYGKHIVARVEKL+A GER IG+ S
Sbjct: 966 ETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGIQS 1015
>ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza brachyantha]
Length = 1058
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSSR 559
ETCDD+ RE ILSRIKVHL+ LKKYTYGKHIVARVEKL+A GER IG+ S+
Sbjct: 1005 ETCDDQQRELILSRIKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQSQ 1055
>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
gi|567887890|ref|XP_006436467.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
homolog 4-like isoform X1 [Citrus sinensis]
gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Citrus sinensis]
gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
homolog 4-like isoform X3 [Citrus sinensis]
gi|557538662|gb|ESR49706.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|557538663|gb|ESR49707.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
Length = 1029
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD++ E ILSRI+VHLN LKKYTYGKHIV+R+EKLIATGER IG+SS
Sbjct: 976 ETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSS 1025
>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
Length = 1026
Score = 84.3 bits (207), Expect = 3e-14
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDDR+ E ILSRIKVHLN LK+YTYGKHIV+RVEKLIATGER IG+ S
Sbjct: 973 ETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLIATGERRIGLLS 1022
>ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein
SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 84.3 bits (207), Expect = 3e-14
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
E CDD+NRE ILSRIKVHLN LK+YTYGKHIVARVEKLIA GER IG S
Sbjct: 947 EICDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGAPS 996
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+ RE ILSRIKVHLN LKKYTYGKHIVARVEKL+A GER I + S
Sbjct: 1012 ETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 1061
>emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+ RE ILSRIKVHLN LKKYTYGKHIVARVEKL+A GER I + S
Sbjct: 307 ETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 356
>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSS 562
ETCDD+ RE ILSRIKVHLN LKKYTYGKHIVARVEKL+A GER I + S
Sbjct: 986 ETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 1035
>ref|XP_006409963.1| hypothetical protein EUTSA_v10016185mg [Eutrema salsugineum]
gi|557111132|gb|ESQ51416.1| hypothetical protein
EUTSA_v10016185mg [Eutrema salsugineum]
Length = 971
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIGVSSR 559
ETCDD+ RE IL+RIKVHLN LKKYTYGKHIVARVEKL+A GER +G+ S+
Sbjct: 915 ETCDDQRRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMGLQSQ 965
>gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 84.0 bits (206), Expect = 5e-14
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = -1
Query: 711 ETCDDRNREHILSRIKVHLNPLKKYTYGKHIVARVEKLIATGERHIG 571
ETCDD+NRE ILSRIKVHLN LK+YTYGKHIV RVEKLIA GER IG
Sbjct: 951 ETCDDQNRELILSRIKVHLNALKRYTYGKHIVTRVEKLIAAGERRIG 997