BLASTX nr result

ID: Zingiber24_contig00005957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005957
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004299359.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    57   2e-06
gb|EMJ11231.1| hypothetical protein PRUPE_ppa019151mg [Prunus pe...    57   2e-06
ref|XP_006659437.1| PREDICTED: uncharacterized protein LOC102716...    56   4e-06

>ref|XP_004299359.1| PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Fragaria vesca
           subsp. vesca]
          Length = 292

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/80 (46%), Positives = 41/80 (51%)
 Frame = -3

Query: 240 RSTVLIFMXXXXXXXXXXXXXXDGDEDDASSFFSLFLLRAAGFLLPFYIMXXXXXXXXXX 61
           RS  LI M              DGD+DDAS+FFSLFLLRAAGFLLP YIM          
Sbjct: 189 RSAALILMALLLLRHALTLPNGDGDDDDASTFFSLFLLRAAGFLLPCYIMAWAISILQRR 248

Query: 60  XXXXXXXXXXATGVAFILQS 1
                     AT VAF+LQ+
Sbjct: 249 RQRQEAAALAATEVAFMLQA 268


>gb|EMJ11231.1| hypothetical protein PRUPE_ppa019151mg [Prunus persica]
          Length = 281

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/80 (46%), Positives = 41/80 (51%)
 Frame = -3

Query: 240 RSTVLIFMXXXXXXXXXXXXXXDGDEDDASSFFSLFLLRAAGFLLPFYIMXXXXXXXXXX 61
           RS  LI M              DGD+DDAS+FFSLFLLRAAGFLLP YIM          
Sbjct: 178 RSAALILMALLLLRHALTLPNGDGDDDDASTFFSLFLLRAAGFLLPCYIMAWAISILQRR 237

Query: 60  XXXXXXXXXXATGVAFILQS 1
                     AT VAF+LQ+
Sbjct: 238 RQRQEAAALAATEVAFMLQA 257


>ref|XP_006659437.1| PREDICTED: uncharacterized protein LOC102716520 isoform X2 [Oryza
           brachyantha]
          Length = 272

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/56 (58%), Positives = 33/56 (58%)
 Frame = -3

Query: 168 DEDDASSFFSLFLLRAAGFLLPFYIMXXXXXXXXXXXXXXXXXXXXATGVAFILQS 1
           DEDDASS FSLFLLR AGFLLPFYIM                    AT VAFILQS
Sbjct: 193 DEDDASSMFSLFLLRVAGFLLPFYIMAWAINILQGRRRRQVAAALAATEVAFILQS 248


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