BLASTX nr result
ID: Zingiber24_contig00005849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00005849
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32987.1| Beta-6 tubulin isoform 2 [Theobroma cacao] 105 6e-31
ref|NP_001058334.1| Os06g0671900 [Oryza sativa Japonica Group] g... 104 8e-31
emb|CBI22726.3| unnamed protein product [Vitis vinifera] 105 8e-31
ref|XP_003558402.1| PREDICTED: tubulin beta-4 chain-like [Brachy... 103 2e-30
sp|P33631.1|TBB2_ANEPH RecName: Full=Tubulin beta-2 chain; AltNa... 104 2e-30
sp|Q39697.1|TBB2_DAUCA RecName: Full=Tubulin beta-2 chain; AltNa... 103 2e-30
tpg|DAA54230.1| TPA: hypothetical protein ZEAMMB73_283964, parti... 103 3e-30
ref|NP_001275206.1| tubulin beta-2 chain-like [Solanum tuberosum... 106 4e-30
gb|AAA67322.1| beta-tubulin [Oryza sativa] 104 2e-29
emb|CAA63779.1| beta-tubulin [Leishmania major] 102 2e-29
dbj|GAA38205.2| tubulin beta [Clonorchis sinensis] 101 4e-29
ref|XP_003106771.1| CRE-TBB-4 protein [Caenorhabditis remanei] g... 101 4e-29
ref|XP_612678.3| PREDICTED: tubulin beta-5 chain [Bos taurus] gi... 101 5e-29
ref|XP_005042063.1| PREDICTED: tubulin beta-5 chain-like isoform... 99 3e-28
emb|CAA73177.1| beta tubulin [Cryptosporidium parvum] 103 3e-28
gb|AAN78304.1| beta-tubulin [Cryptosporidium parvum] 103 3e-28
gb|ACS29569.1| beta-tubulin isotype 1 [Haemonchus contortus] 99 3e-28
gb|ABV72561.1| beta-tubulin [Heterocapsa rotundata] 97 3e-28
emb|CAA63780.1| beta-tubulin [Leishmania major] 98 3e-28
gb|ETN84974.1| Tubulin/FtsZ family, GTPase domain protein, parti... 100 3e-28
>gb|EOY32987.1| Beta-6 tubulin isoform 2 [Theobroma cacao]
Length = 460
Score = 105 bits (263), Expect(2) = 6e-31
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP+GL MASTFIGNSTSIQEMF
Sbjct: 328 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMF 379
Score = 54.3 bits (129), Expect(2) = 6e-31
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 415 EMEFTEAESNMNDLVSEYQQYQDATA 440
>ref|NP_001058334.1| Os06g0671900 [Oryza sativa Japonica Group]
gi|113596374|dbj|BAF20248.1| Os06g0671900 [Oryza sativa
Japonica Group]
Length = 433
Score = 104 bits (259), Expect(2) = 8e-31
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEM 155
DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP GLKMASTFIGNSTSIQEM
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEM 377
Score = 55.5 bits (132), Expect(2) = 8e-31
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLVAEYQQYQDATA
Sbjct: 392 EMEFTEAESNMNDLVAEYQQYQDATA 417
>emb|CBI22726.3| unnamed protein product [Vitis vinifera]
Length = 326
Score = 105 bits (262), Expect(2) = 8e-31
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPP GLKMASTFIGNSTSIQEMF
Sbjct: 225 DEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 276
Score = 54.3 bits (129), Expect(2) = 8e-31
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 282 EMEFTEAESNMNDLVSEYQQYQDATA 307
>ref|XP_003558402.1| PREDICTED: tubulin beta-4 chain-like [Brachypodium distachyon]
Length = 431
Score = 103 bits (256), Expect(2) = 2e-30
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEM 155
DEQMLNVQNKNSSYFVEWIPNNVKSSVCD+PP+GLKMA TF+GNSTSIQEM
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDMPPRGLKMAGTFVGNSTSIQEM 377
Score = 55.5 bits (132), Expect(2) = 2e-30
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLVAEYQQYQDATA
Sbjct: 392 EMEFTEAESNMNDLVAEYQQYQDATA 417
>sp|P33631.1|TBB2_ANEPH RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
gi|296500|emb|CAA48930.1| beta tubulin 2 [Anemia
phyllitidis]
Length = 411
Score = 104 bits (259), Expect(2) = 2e-30
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP GLKMA TFIGNSTSIQEMF
Sbjct: 295 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMACTFIGNSTSIQEMF 346
Score = 54.3 bits (129), Expect(2) = 2e-30
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 373 EMEFTEAESNMNDLVSEYQQYQDATA 398
>sp|Q39697.1|TBB2_DAUCA RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
gi|1488052|gb|AAB64308.1| beta-tubulin 2 [Daucus carota]
Length = 444
Score = 103 bits (258), Expect(2) = 2e-30
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQ+LNVQNKNSSYFVEWIPNNVKSSVCDIPP+GL M+STFIGNSTSIQEMF
Sbjct: 327 DEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMSSTFIGNSTSIQEMF 378
Score = 54.3 bits (129), Expect(2) = 2e-30
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDATA 430
>tpg|DAA54230.1| TPA: hypothetical protein ZEAMMB73_283964, partial [Zea mays]
Length = 427
Score = 103 bits (257), Expect(2) = 3e-30
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEM 155
DEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP+GL MASTFIGNSTSIQEM
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEM 377
Score = 54.3 bits (129), Expect(2) = 3e-30
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 392 EMEFTEAESNMNDLVSEYQQYQDATA 417
>ref|NP_001275206.1| tubulin beta-2 chain-like [Solanum tuberosum]
gi|77416913|gb|ABA81852.1| unknown [Solanum tuberosum]
Length = 448
Score = 106 bits (264), Expect(2) = 4e-30
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYFVEWIPNNVKS+VCDIPP GLKMASTFIGNSTSIQEMF
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMF 378
Score = 51.2 bits (121), Expect(2) = 4e-30
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAES MNDLV+EYQQYQDATA
Sbjct: 405 EMEFTEAESYMNDLVSEYQQYQDATA 430
>gb|AAA67322.1| beta-tubulin [Oryza sativa]
Length = 435
Score = 104 bits (260), Expect(2) = 2e-29
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP GLKMASTFIGNSTSIQEM+
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMW 378
Score = 50.4 bits (119), Expect(2) = 2e-29
Identities = 26/28 (92%), Positives = 26/28 (92%), Gaps = 2/28 (7%)
Frame = +2
Query: 173 EMEFTEAESNMND--LVAEYQQYQDATA 250
EMEFTEAESNMND LVAEYQQYQDATA
Sbjct: 392 EMEFTEAESNMNDPGLVAEYQQYQDATA 419
>emb|CAA63779.1| beta-tubulin [Leishmania major]
Length = 443
Score = 102 bits (253), Expect(2) = 2e-29
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYF+EWIPNN+KSS+CDIPPKGLKM+ TFIGN+T IQEMF
Sbjct: 327 DEQMLNVQNKNSSYFIEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMF 378
Score = 52.8 bits (125), Expect(2) = 2e-29
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDAT 247
EMEFTEAESNMNDLV+EYQQYQDAT
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDAT 429
>dbj|GAA38205.2| tubulin beta [Clonorchis sinensis]
Length = 483
Score = 101 bits (251), Expect(2) = 4e-29
Identities = 45/52 (86%), Positives = 52/52 (100%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSS+FVEWIPNNVK++VCDIPP+GLKM+STFIGNST+IQE+F
Sbjct: 366 DEQMLNVQNKNSSFFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELF 417
Score = 52.8 bits (125), Expect(2) = 4e-29
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQ+ATA
Sbjct: 444 EMEFTEAESNMNDLVSEYQQYQEATA 469
>ref|XP_003106771.1| CRE-TBB-4 protein [Caenorhabditis remanei]
gi|308253425|gb|EFO97377.1| CRE-TBB-4 protein
[Caenorhabditis remanei]
Length = 456
Score = 101 bits (251), Expect(2) = 4e-29
Identities = 44/52 (84%), Positives = 52/52 (100%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+G+KMA+TF+GNST+IQE+F
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELF 378
Score = 52.8 bits (125), Expect(2) = 4e-29
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQ+ATA
Sbjct: 417 EMEFTEAESNMNDLVSEYQQYQEATA 442
>ref|XP_612678.3| PREDICTED: tubulin beta-5 chain [Bos taurus]
gi|297491364|ref|XP_002698826.1| PREDICTED: tubulin
beta-5 chain [Bos taurus] gi|296472251|tpg|DAA14366.1|
TPA: tubulin, beta 5-like [Bos taurus]
Length = 444
Score = 101 bits (252), Expect(2) = 5e-29
Identities = 46/52 (88%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKMA TFIGNST+IQE+F
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELF 378
Score = 52.0 bits (123), Expect(2) = 5e-29
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
E EFTEAESNMNDLV+EYQQYQDATA
Sbjct: 405 ETEFTEAESNMNDLVSEYQQYQDATA 430
>ref|XP_005042063.1| PREDICTED: tubulin beta-5 chain-like isoform X2 [Ficedula
albicollis]
Length = 449
Score = 98.6 bits (244), Expect(2) = 3e-28
Identities = 44/50 (88%), Positives = 50/50 (100%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQE 152
DEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP+GLKM++TFIGNST+IQE
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 376
Score = 52.8 bits (125), Expect(2) = 3e-28
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQ+ATA
Sbjct: 408 EMEFTEAESNMNDLVSEYQQYQEATA 433
>emb|CAA73177.1| beta tubulin [Cryptosporidium parvum]
Length = 446
Score = 103 bits (256), Expect(2) = 3e-28
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQML VQN+NSSYFVEWIPNN+KSSVCDIPPKGLKMASTF+GNST+IQEMF
Sbjct: 329 DEQMLLVQNRNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFVGNSTAIQEMF 380
Score = 48.1 bits (113), Expect(2) = 3e-28
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQD 241
EMEFTEAE+NMNDLV+EYQQYQD
Sbjct: 407 EMEFTEAETNMNDLVSEYQQYQD 429
>gb|AAN78304.1| beta-tubulin [Cryptosporidium parvum]
Length = 445
Score = 103 bits (256), Expect(2) = 3e-28
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQML VQN+NSSYFVEWIPNN+KSSVCDIPPKGLKMASTF+GNST+IQEMF
Sbjct: 328 DEQMLLVQNRNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFVGNSTAIQEMF 379
Score = 48.1 bits (113), Expect(2) = 3e-28
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQD 241
EMEFTEAE+NMNDLV+EYQQYQD
Sbjct: 406 EMEFTEAETNMNDLVSEYQQYQD 428
>gb|ACS29569.1| beta-tubulin isotype 1 [Haemonchus contortus]
Length = 448
Score = 98.6 bits (244), Expect(2) = 3e-28
Identities = 42/52 (80%), Positives = 52/52 (100%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
D+QM++VQNKNSSYFVEWIPNNVK++VCDIPP+GLKMA+TF+GNST+IQE+F
Sbjct: 327 DDQMMSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELF 378
Score = 52.4 bits (124), Expect(2) = 3e-28
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDL++EYQQYQ+ATA
Sbjct: 405 EMEFTEAESNMNDLISEYQQYQEATA 430
>gb|ABV72561.1| beta-tubulin [Heterocapsa rotundata]
Length = 447
Score = 96.7 bits (239), Expect(2) = 3e-28
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNV NKNSSYFVEWIPNNVK+S+CDIPPKGLKM+ F GNST+IQEMF
Sbjct: 327 DEQMLNVCNKNSSYFVEWIPNNVKASICDIPPKGLKMSVAFAGNSTAIQEMF 378
Score = 54.3 bits (129), Expect(2) = 3e-28
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDATA 430
>emb|CAA63780.1| beta-tubulin [Leishmania major]
Length = 443
Score = 98.2 bits (243), Expect(2) = 3e-28
Identities = 42/52 (80%), Positives = 50/52 (96%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLNVQNKNSSYF+EW+PNN++SS+CDIPPKGLKM++T IGN+T IQEMF
Sbjct: 327 DEQMLNVQNKNSSYFIEWLPNNIRSSICDIPPKGLKMSATSIGNNTCIQEMF 378
Score = 52.8 bits (125), Expect(2) = 3e-28
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDAT 247
EMEFTEAESNMNDLV+EYQQYQDAT
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDAT 429
>gb|ETN84974.1| Tubulin/FtsZ family, GTPase domain protein, partial [Necator
americanus]
Length = 433
Score = 100 bits (248), Expect(2) = 3e-28
Identities = 43/52 (82%), Positives = 52/52 (100%)
Frame = +3
Query: 3 DEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMF 158
DEQMLN+QNKNSSYFV+WIPNNVK++VCDIPP+GLKM++TFIGNST+IQE+F
Sbjct: 308 DEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 359
Score = 50.8 bits (120), Expect(2) = 3e-28
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 173 EMEFTEAESNMNDLVAEYQQYQDATA 250
EMEFTEAESNMNDLV+EYQQYQ+A A
Sbjct: 397 EMEFTEAESNMNDLVSEYQQYQEAAA 422