BLASTX nr result
ID: Zingiber24_contig00005723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00005723
(246 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730 [S... 92 7e-17
emb|CBI30241.3| unnamed protein product [Vitis vinifera] 91 1e-16
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi... 91 1e-16
gb|EMJ06874.1| hypothetical protein PRUPE_ppa009583mg [Prunus pe... 91 2e-16
ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi... 91 2e-16
emb|CBI17088.3| unnamed protein product [Vitis vinifera] 91 2e-16
gb|EMJ03580.1| hypothetical protein PRUPE_ppa009356mg [Prunus pe... 90 4e-16
gb|EMJ03579.1| hypothetical protein PRUPE_ppa009356mg [Prunus pe... 90 4e-16
ref|XP_004294038.1| PREDICTED: histone deacetylase HDT1-like [Fr... 89 6e-16
emb|CBI29370.3| unnamed protein product [Vitis vinifera] 89 8e-16
gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| hi... 88 1e-15
ref|XP_006484979.1| PREDICTED: histone deacetylase HDT1-like iso... 87 2e-15
ref|XP_004960961.1| PREDICTED: histone deacetylase HDT2-like [Se... 87 2e-15
ref|NP_001105631.1| histone deacetylase HDT2 [Zea mays] gi|73919... 86 5e-15
ref|XP_006424344.1| hypothetical protein CICLE_v10028932mg [Citr... 85 9e-15
ref|XP_002441648.1| hypothetical protein SORBIDRAFT_09g030950 [S... 84 2e-14
gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Ja... 84 3e-14
gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza... 84 3e-14
gb|EEC79812.1| hypothetical protein OsI_21251 [Oryza sativa Indi... 84 3e-14
ref|NP_001056523.1| Os05g0597100 [Oryza sativa Japonica Group] g... 84 3e-14
>ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730 [Sorghum bicolor]
gi|241946726|gb|EES19871.1| hypothetical protein
SORBIDRAFT_09g026730 [Sorghum bicolor]
Length = 299
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/62 (70%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = -2
Query: 242 GKKGG-HVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
GKKG HVATPHPAK GKTP+N+DKSK+++PKS G + CKSCTKTFNSE A Q+H+ AKH
Sbjct: 238 GKKGAVHVATPHPAK-GKTPANNDKSKEKSPKSGGSVPCKSCTKTFNSEMALQAHSKAKH 296
Query: 65 SA 60
A
Sbjct: 297 GA 298
>emb|CBI30241.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAK 69
D K GGHVATP+P+KQ GKTP+N++K KQQ KS G SCKSC ++FNSE A QSHT AK
Sbjct: 85 DKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAK 144
Query: 68 HSAGK 54
H+A K
Sbjct: 145 HTAAK 149
>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 307
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAK 69
D K GGHVATP+P+KQ GKTP+N++K KQQ KS G SCKSC ++FNSE A QSHT AK
Sbjct: 243 DKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAK 302
Query: 68 HSAGK 54
H+A K
Sbjct: 303 HTAAK 307
>gb|EMJ06874.1| hypothetical protein PRUPE_ppa009583mg [Prunus persica]
Length = 286
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/63 (66%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQG-KTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAK 69
DGKK H ATPHPAK+G KTP+ DK+K QTPKS G SCK C+K+FNS+ A QSH AK
Sbjct: 223 DGKKAAHTATPHPAKKGGKTPATGDKAKPQTPKSVGEHSCKPCSKSFNSDGALQSHNKAK 282
Query: 68 HSA 60
HSA
Sbjct: 283 HSA 285
>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 300
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Frame = -2
Query: 245 DGKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNA 72
DGKKGG H ATPHP K+ GKTP++ DK K Q+PKS G +SCKSC+KTFNSE A QSH+ A
Sbjct: 236 DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSKA 295
Query: 71 KHSA 60
KH A
Sbjct: 296 KHGA 299
>emb|CBI17088.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Frame = -2
Query: 245 DGKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNA 72
DGKKGG H ATPHP K+ GKTP++ DK K Q+PKS G +SCKSC+KTFNSE A QSH+ A
Sbjct: 289 DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSKA 348
Query: 71 KHSA 60
KH A
Sbjct: 349 KHGA 352
>gb|EMJ03580.1| hypothetical protein PRUPE_ppa009356mg [Prunus persica]
Length = 296
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = -2
Query: 245 DGKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNA 72
D KKG H+ATPHPAKQ GK P+ SD+SKQQ PKS G +C+SC ++FNS+ A QSHT A
Sbjct: 231 DSKKGSVHIATPHPAKQAGKKPATSDQSKQQAPKSGGTFNCQSCNRSFNSDGALQSHTKA 290
Query: 71 KHSAGK 54
KHSA K
Sbjct: 291 KHSAAK 296
>gb|EMJ03579.1| hypothetical protein PRUPE_ppa009356mg [Prunus persica]
Length = 290
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = -2
Query: 245 DGKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNA 72
D KKG H+ATPHPAKQ GK P+ SD+SKQQ PKS G +C+SC ++FNS+ A QSHT A
Sbjct: 225 DSKKGSVHIATPHPAKQAGKKPATSDQSKQQAPKSGGTFNCQSCNRSFNSDGALQSHTKA 284
Query: 71 KHSAGK 54
KHSA K
Sbjct: 285 KHSAAK 290
>ref|XP_004294038.1| PREDICTED: histone deacetylase HDT1-like [Fragaria vesca subsp.
vesca]
Length = 297
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/65 (67%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQGKTPSNSDKSKQQTPKST-GPISCKSCTKTFNSEAACQSHTNAK 69
D KKGGH TPHPAK+GKTP+ +DKSK QTPKS G SC SC+K F S+ A QSH AK
Sbjct: 234 DAKKGGHTDTPHPAKKGKTPA-TDKSKAQTPKSAGGNFSCGSCSKAFGSDGALQSHNKAK 292
Query: 68 HSAGK 54
HSAGK
Sbjct: 293 HSAGK 297
>emb|CBI29370.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 245 DGKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNA 72
DGKKGG H ATPHP K+ GKTP+ DK K+Q+PKS G +SCKSC+KTFNSE A QSH+
Sbjct: 46 DGKKGGAHTATPHPNKKAGKTPATGDKGKEQSPKSGGQVSCKSCSKTFNSENALQSHSKT 105
Query: 71 KH 66
KH
Sbjct: 106 KH 107
>gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| histone deacetylase
HDT2 [Zea mays]
Length = 303
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = -2
Query: 242 GKKGG-HVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
GKKG HVATPHPAK GKTP+N+DKS +++PKS G + CKSC+KTFNSE A Q+H+ AKH
Sbjct: 242 GKKGATHVATPHPAK-GKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKH 300
Query: 65 SA 60
A
Sbjct: 301 GA 302
>ref|XP_006484979.1| PREDICTED: histone deacetylase HDT1-like isoform X1 [Citrus
sinensis] gi|568863059|ref|XP_006484980.1| PREDICTED:
histone deacetylase HDT1-like isoform X2 [Citrus
sinensis]
Length = 298
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
DGKKG HVATPHP+K KTP+ +K QTPKS G +SC SC+KTFNSE A QSHT AKH
Sbjct: 240 DGKKGVHVATPHPSKGVKTPN----AKAQTPKSGGQVSCSSCSKTFNSENALQSHTKAKH 295
Query: 65 SA 60
SA
Sbjct: 296 SA 297
>ref|XP_004960961.1| PREDICTED: histone deacetylase HDT2-like [Setaria italica]
Length = 304
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = -2
Query: 242 GKKG-GHVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
GKKG HVATPHPAK KTP+N+DKSK+++PKS G + CKSC+KTFNSE A Q+H+ AKH
Sbjct: 244 GKKGVTHVATPHPAK--KTPANNDKSKEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKH 301
Query: 65 SA 60
A
Sbjct: 302 GA 303
>ref|NP_001105631.1| histone deacetylase HDT2 [Zea mays]
gi|73919941|sp|Q9M4U5.1|HDT2_MAIZE RecName: Full=Histone
deacetylase HDT2; AltName: Full=Histone deacetylase 2b;
Short=HD2b; AltName: Full=Zm-HD2b
gi|7716948|gb|AAF68624.1|AF254072_1 histone deacetylase
2 isoform b [Zea mays]
Length = 303
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -2
Query: 242 GKKGG-HVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
GKKG HVATPHPAK GKTP+N+DK +++PKS G + CKSC+KTFNSE A Q+H+ AKH
Sbjct: 242 GKKGATHVATPHPAK-GKTPANNDKLTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKH 300
Query: 65 SA 60
A
Sbjct: 301 GA 302
>ref|XP_006424344.1| hypothetical protein CICLE_v10028932mg [Citrus clementina]
gi|557526278|gb|ESR37584.1| hypothetical protein
CICLE_v10028932mg [Citrus clementina]
Length = 301
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = -2
Query: 245 DGKKGGHVATPHPAKQGKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAKH 66
DGKKG HVATPHP+K KTP+ +K QTPKS G ++C SC+KTFNS+ A QSHT AKH
Sbjct: 243 DGKKGVHVATPHPSKGVKTPN----AKTQTPKSGGQVTCSSCSKTFNSDNALQSHTKAKH 298
Query: 65 SA 60
SA
Sbjct: 299 SA 300
>ref|XP_002441648.1| hypothetical protein SORBIDRAFT_09g030950 [Sorghum bicolor]
gi|241946933|gb|EES20078.1| hypothetical protein
SORBIDRAFT_09g030950 [Sorghum bicolor]
Length = 307
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/63 (63%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
Frame = -2
Query: 242 GKKGG-HVATPHPAKQ-GKTPSNSDKSKQQTPKSTGPISCKSCTKTFNSEAACQSHTNAK 69
GKKG HVATP+PAK+ GKTP+N+DKSK+++P+S + CKSC+KTFNSE A Q+H+ AK
Sbjct: 244 GKKGATHVATPYPAKRAGKTPANNDKSKERSPRSGRSVPCKSCSKTFNSEMALQAHSKAK 303
Query: 68 HSA 60
H A
Sbjct: 304 HRA 306
>gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Japonica Group]
Length = 274
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = -2
Query: 239 KKGGHVATPHPAKQG-KTPSNSDKSKQQTPKSTG-PISCKSCTKTFNSEAACQSHTNAKH 66
KKG HVATPHPAKQ KTP N DKSK+++PKS G ISCKSC+KTFNSE A QSH+ AKH
Sbjct: 213 KKGVHVATPHPAKQASKTPVN-DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 271
Query: 65 SA 60
A
Sbjct: 272 PA 273
>gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza sativa]
Length = 297
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = -2
Query: 239 KKGGHVATPHPAKQG-KTPSNSDKSKQQTPKSTG-PISCKSCTKTFNSEAACQSHTNAKH 66
KKG HVATPHPAKQ KTP N DKSK+++PKS G ISCKSC+KTFNSE A QSH+ AKH
Sbjct: 236 KKGVHVATPHPAKQASKTPVN-DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 294
Query: 65 SA 60
A
Sbjct: 295 PA 296
>gb|EEC79812.1| hypothetical protein OsI_21251 [Oryza sativa Indica Group]
Length = 297
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = -2
Query: 239 KKGGHVATPHPAKQG-KTPSNSDKSKQQTPKSTG-PISCKSCTKTFNSEAACQSHTNAKH 66
KKG HVATPHPAKQ KTP N DKSK+++PKS G ISCKSC+KTFNSE A QSH+ AKH
Sbjct: 236 KKGVHVATPHPAKQASKTPVN-DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 294
Query: 65 SA 60
A
Sbjct: 295 PA 296
>ref|NP_001056523.1| Os05g0597100 [Oryza sativa Japonica Group]
gi|113580074|dbj|BAF18437.1| Os05g0597100 [Oryza sativa
Japonica Group] gi|215706316|dbj|BAG93172.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222632796|gb|EEE64928.1| hypothetical protein
OsJ_19788 [Oryza sativa Japonica Group]
Length = 297
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = -2
Query: 239 KKGGHVATPHPAKQG-KTPSNSDKSKQQTPKSTG-PISCKSCTKTFNSEAACQSHTNAKH 66
KKG HVATPHPAKQ KTP N DKSK+++PKS G ISCKSC+KTFNSE A QSH+ AKH
Sbjct: 236 KKGVHVATPHPAKQASKTPVN-DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 294
Query: 65 SA 60
A
Sbjct: 295 PA 296