BLASTX nr result

ID: Zingiber24_contig00005541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005541
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB54169.1| Polyadenylate-binding protein 2 [Morus notabilis]       89   6e-16
gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma ca...    88   1e-15
ref|XP_006494495.1| PREDICTED: polyadenylate-binding protein 4 [...    88   1e-15
ref|XP_006425948.1| hypothetical protein CICLE_v10025109mg [Citr...    88   1e-15
ref|XP_006425947.1| hypothetical protein CICLE_v10025109mg [Citr...    88   1e-15
ref|NP_001275799.1| poly A-binding protein 2 [Citrus sinensis] g...    88   1e-15
ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citr...    87   2e-15
ref|XP_002301171.2| hypothetical protein POPTR_0002s12570g [Popu...    87   2e-15
ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [...    87   3e-15
ref|XP_006855143.1| hypothetical protein AMTR_s00051p00026490 [A...    86   4e-15
gb|AAB61594.1| poly(A)-binding protein, partial [Mesembryanthemu...    86   4e-15
ref|XP_006473293.1| PREDICTED: polyadenylate-binding protein 8-l...    85   1e-14
ref|XP_006434727.1| hypothetical protein CICLE_v10000537mg [Citr...    85   1e-14
gb|EOX91498.1| Poly(A) binding protein 8 [Theobroma cacao]             85   1e-14
ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-l...    83   3e-14
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha...    83   3e-14
gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana taba...    83   3e-14
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba...    83   3e-14
gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial ...    83   4e-14
gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus pe...    83   4e-14

>gb|EXB54169.1| Polyadenylate-binding protein 2 [Morus notabilis]
          Length = 647

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/56 (82%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ   QA SP DR+A LSLND
Sbjct: 588 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQTPQANSPTDRMATLSLND 643


>gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma cacao]
          Length = 648

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEALEVLRSVA  QQQA SP D+LA+LSLND
Sbjct: 590 GMLLEMDQTEVLHLLESPEALKAKVAEALEVLRSVAA-QQQANSPADQLASLSLND 644


>ref|XP_006494495.1| PREDICTED: polyadenylate-binding protein 4 [Citrus sinensis]
          Length = 663

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ Q    SP DR+A+LSLND
Sbjct: 604 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLND 659


>ref|XP_006425948.1| hypothetical protein CICLE_v10025109mg [Citrus clementina]
           gi|557527938|gb|ESR39188.1| hypothetical protein
           CICLE_v10025109mg [Citrus clementina]
          Length = 652

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ Q    SP DR+A+LSLND
Sbjct: 593 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLND 648


>ref|XP_006425947.1| hypothetical protein CICLE_v10025109mg [Citrus clementina]
           gi|557527937|gb|ESR39187.1| hypothetical protein
           CICLE_v10025109mg [Citrus clementina]
          Length = 650

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ Q    SP DR+A+LSLND
Sbjct: 591 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLND 646


>ref|NP_001275799.1| poly A-binding protein 2 [Citrus sinensis]
           gi|359386152|gb|AEV43365.1| poly A-binding protein 2
           [Citrus sinensis]
          Length = 652

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ Q    SP DR+A+LSLND
Sbjct: 593 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLND 648


>ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citrus clementina]
           gi|568867419|ref|XP_006487035.1| PREDICTED:
           polyadenylate-binding protein 2-like [Citrus sinensis]
           gi|557524909|gb|ESR36215.1| hypothetical protein
           CICLE_v10027999mg [Citrus clementina]
          Length = 645

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/56 (83%), Positives = 52/56 (92%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ QQQA +P D+LA+LSLND
Sbjct: 587 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQ-QQQAGNPADQLASLSLND 641


>ref|XP_002301171.2| hypothetical protein POPTR_0002s12570g [Populus trichocarpa]
           gi|550344867|gb|EEE80444.2| hypothetical protein
           POPTR_0002s12570g [Populus trichocarpa]
          Length = 657

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 50/66 (75%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND-VVS 130
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VA  QQQ  +P D+LA+LSLN+ +VS
Sbjct: 593 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTVAA-QQQINNPADQLASLSLNENLVS 651

Query: 129 *VCLFD 112
            VCL D
Sbjct: 652 LVCLVD 657


>ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|296082381|emb|CBI21386.3| unnamed protein product
           [Vitis vinifera]
          Length = 654

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/59 (77%), Positives = 53/59 (89%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLNDVVS 130
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VA  QQQA +P DR+A+LSLND ++
Sbjct: 597 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVA--QQQANNPTDRMASLSLNDTLT 653


>ref|XP_006855143.1| hypothetical protein AMTR_s00051p00026490 [Amborella trichopoda]
           gi|548858896|gb|ERN16610.1| hypothetical protein
           AMTR_s00051p00026490 [Amborella trichopoda]
          Length = 654

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVA-QHQQQAVSPVDRLAALSLNDVV 133
           GMLLEMDQTEVLHLLESP+AL AKVAEA++VLR+VA Q QQQ  +P D+LAALSLND +
Sbjct: 594 GMLLEMDQTEVLHLLESPDALKAKVAEAMDVLRNVAQQQQQQGAAPADQLAALSLNDAL 652


>gb|AAB61594.1| poly(A)-binding protein, partial [Mesembryanthemum crystallinum]
          Length = 176

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 4/63 (6%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQ----AVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL +KVAEA+EVLR+VAQ QQQ    + +P D+LAALSLND
Sbjct: 114 GMLLEMDQTEVLHLLESPEALKSKVAEAMEVLRNVAQQQQQQQQPSSNPADQLAALSLND 173

Query: 138 VVS 130
            +S
Sbjct: 174 NLS 176


>ref|XP_006473293.1| PREDICTED: polyadenylate-binding protein 8-like [Citrus sinensis]
          Length = 652

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLRSVA  QQQA +P D+LA+LSLN+
Sbjct: 595 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA--QQQANNPADQLASLSLNE 648


>ref|XP_006434727.1| hypothetical protein CICLE_v10000537mg [Citrus clementina]
           gi|557536849|gb|ESR47967.1| hypothetical protein
           CICLE_v10000537mg [Citrus clementina]
          Length = 651

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLRSVA  QQQA +P D+LA+LSLN+
Sbjct: 594 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA--QQQANNPADQLASLSLNE 647


>gb|EOX91498.1| Poly(A) binding protein 8 [Theobroma cacao]
          Length = 659

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/56 (78%), Positives = 49/56 (87%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+V   QQ+A S  DR+A+LSLND
Sbjct: 601 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVGPPQQKANSTTDRMASLSLND 656


>ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
           subsp. vesca]
          Length = 651

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ QQQA    D+LA++SLND
Sbjct: 593 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQ-QQQAGGAADQLASMSLND 647


>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
          Length = 643

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+V+  QQQ+ +P D+LA+LSLND
Sbjct: 586 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVS--QQQSSNPADQLASLSLND 639


>gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum]
          Length = 330

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+V+  QQQ+ +P D+LA+LSLND
Sbjct: 273 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVS--QQQSSNPADQLASLSLND 326


>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
          Length = 649

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+V+  QQQ+ +P D+LA+LSLND
Sbjct: 592 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVS--QQQSSNPADQLASLSLND 645


>gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial [Phaseolus
           vulgaris]
          Length = 561

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA++VLR+VAQ QQQA    D+LA+LSLND
Sbjct: 505 GMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQ-QQQAGGAADQLASLSLND 559


>gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus persica]
          Length = 653

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = -3

Query: 306 GMLLEMDQTEVLHLLESPEALNAKVAEALEVLRSVAQHQQQAVSPVDRLAALSLND 139
           GMLLEMDQTEVLHLLESPEAL AKVAEA+EVLR+VAQ QQQA +  D+LA+LSLN+
Sbjct: 595 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQ-QQQAGNAADQLASLSLNE 649


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