BLASTX nr result

ID: Zingiber24_contig00005533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005533
         (504 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346346.1| PREDICTED: uncharacterized protein LOC102598...    57   3e-06
ref|NP_001077892.1| uncharacterized protein [Arabidopsis thalian...    55   7e-06

>ref|XP_006346346.1| PREDICTED: uncharacterized protein LOC102598144 isoform X1 [Solanum
           tuberosum]
          Length = 99

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = +2

Query: 65  RRFSAASPRSMEEIGCAQSFLPLYSAMATPRLXXXXXXXXXXXCCELSQGTFRRTGQDR 241
           RRFS  SPR++  +GC QSFLPL++ +A  RL           CCEL  GTF+R+ QDR
Sbjct: 42  RRFSFTSPRTLGALGCTQSFLPLHNVVAGTRL-TSHLTVNVRACCELYHGTFQRSCQDR 99


>ref|NP_001077892.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145328716|ref|NP_001077893.1| uncharacterized protein
           [Arabidopsis thaliana] gi|330251263|gb|AEC06357.1|
           uncharacterized protein AT2G15000 [Arabidopsis thaliana]
           gi|330251264|gb|AEC06358.1| uncharacterized protein
           AT2G15000 [Arabidopsis thaliana]
          Length = 101

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = +2

Query: 65  RRFSAASP-RSMEEIGCAQSFLPLYSAMATPRLXXXXXXXXXXXCCELSQGTFRRTGQDR 241
           RRF+ +SP R++  +GC QSFLPLYS +AT +L            CELS GTF+RT QDR
Sbjct: 43  RRFTFSSPSRNLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAF-CELSNGTFQRTCQDR 101


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