BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005404
         (638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [A...   108   1e-21
gb|EPS69148.1| hypothetical protein M569_05619, partial [Genlise...   106   5e-21
ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum...   104   2e-20
ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform ...   104   2e-20
ref|XP_004232564.1| PREDICTED: HMG1/2-like protein-like isoform ...   104   2e-20
emb|CAA05365.1| high mobility group protein [Solanum tuberosum]       104   2e-20
gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlise...   103   3e-20
gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissu...   103   3e-20
sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein              102   9e-20
gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]                100   4e-19
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       100   5e-19
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   100   5e-19
ref|XP_006425283.1| hypothetical protein CICLE_v10026715mg [Citr...    99   8e-19
tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m...    99   8e-19
tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m...    99   8e-19
tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m...    99   8e-19
gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D ...    99   8e-19
ref|XP_006660948.1| PREDICTED: HMG1/2-like protein-like [Oryza b...    98   2e-18
ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group] g...    98   2e-18
gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japo...    98   2e-18

>ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [Amborella trichopoda]
           gi|548859521|gb|ERN17201.1| hypothetical protein
           AMTR_s00044p00160130 [Amborella trichopoda]
          Length = 156

 Score =  108 bits (271), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 53/62 (85%)
 Frame = -2

Query: 577 KKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGD 398
           K  +ERASK  +  K EKDPNKPKRP SAFFVFMEEFRKTFKEKHPNNKSVA VGKAGGD
Sbjct: 26  KPATERASKPAKKGKPEKDPNKPKRPASAFFVFMEEFRKTFKEKHPNNKSVAAVGKAGGD 85

Query: 397 KW 392
           KW
Sbjct: 86  KW 87


>gb|EPS69148.1| hypothetical protein M569_05619, partial [Genlisea aurea]
          Length = 152

 Score =  106 bits (265), Expect = 5e-21
 Identities = 51/64 (79%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
 Frame = -2

Query: 580 VKKGSERASKKP-RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAG 404
           VKKG+   SKKP +  KA KDPNKPKRP SAFFVFMEEFRKT+KEKHPNNKSVA VGKAG
Sbjct: 21  VKKGAAATSKKPAKKEKAVKDPNKPKRPASAFFVFMEEFRKTYKEKHPNNKSVAAVGKAG 80

Query: 403 GDKW 392
           G+KW
Sbjct: 81  GEKW 84


>ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum tuberosum]
          Length = 141

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = -2

Query: 577 KKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGD 398
           KK +E  SKK +N  A KDPNKPKRPPSAFFVFMEEFRKT+KEKHPNNKSVAVVGKAGGD
Sbjct: 18  KKATE--SKKAKN--AAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGD 73

Query: 397 KW 392
           KW
Sbjct: 74  KW 75


>ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Solanum
           lycopersicum]
          Length = 140

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = -2

Query: 577 KKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGD 398
           KK +E  SKK +N  A KDPNKPKRPPSAFFVFMEEFRKT+KEKHPNNKSVAVVGKAGGD
Sbjct: 18  KKATE--SKKAKN--AAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGD 73

Query: 397 KW 392
           KW
Sbjct: 74  KW 75


>ref|XP_004232564.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Solanum
           lycopersicum]
          Length = 147

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = -2

Query: 577 KKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGD 398
           KK +E  SKK +N  A KDPNKPKRPPSAFFVFMEEFRKT+KEKHPNNKSVAVVGKAGGD
Sbjct: 18  KKATE--SKKAKN--AAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGD 73

Query: 397 KW 392
           KW
Sbjct: 74  KW 75


>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
          Length = 141

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = -2

Query: 577 KKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGD 398
           KK +E  SKK +N  A KDPNKPKRPPSAFFVFMEEFRKT+KEKHPNNKSVAVVGKAGGD
Sbjct: 18  KKATE--SKKAKN--AAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGD 73

Query: 397 KW 392
           KW
Sbjct: 74  KW 75


>gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlisea aurea]
          Length = 152

 Score =  103 bits (258), Expect = 3e-20
 Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = -2

Query: 580 VKKGSERASKKP-RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAG 404
           VK+G+  A K P +  K  KDPNKPKRP SAFFVFMEEFRKT+KEKHPNNKSVA VGKAG
Sbjct: 21  VKRGAAAAGKNPAKKAKPTKDPNKPKRPASAFFVFMEEFRKTYKEKHPNNKSVAAVGKAG 80

Query: 403 GDKW 392
           GDKW
Sbjct: 81  GDKW 84


>gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
          Length = 106

 Score =  103 bits (258), Expect = 3e-20
 Identities = 48/64 (75%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
 Frame = -2

Query: 577 KKGSERASKKP--RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAG 404
           +K +E+ +KKP  + +KAEKDPNKPKRPPSAFFVFMEEFRK FKEK+PNNK V+VVGKA 
Sbjct: 22  RKAAEKPAKKPVVKKSKAEKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAA 81

Query: 403 GDKW 392
           GDKW
Sbjct: 82  GDKW 85


>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
          Length = 144

 Score =  102 bits (254), Expect = 9e-20
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = -2

Query: 565 ERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           ++A+   +  KA KDPNKPKRPPSAFFVFME+FRKT+KEKHPNNKSVAVVGKAGGDKW
Sbjct: 18  KQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKW 75


>gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
          Length = 142

 Score =  100 bits (249), Expect = 4e-19
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = -2

Query: 565 ERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           ++A++  +  KA KDPNKPKRPPSAFFVFMEEFRKT+KEKHPNNKSVA VGKAGGD W
Sbjct: 18  KKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAW 75


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  100 bits (248), Expect = 5e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = -2

Query: 565 ERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           +R  +  ++ K+ KDPNKPKRPPSAFFVFME+FRKT+KEKHPNNKSVA VGKAGGDKW
Sbjct: 18  KRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKW 75


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  100 bits (248), Expect = 5e-19
 Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 2/65 (3%)
 Frame = -2

Query: 580 VKKGSE--RASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKA 407
           VKKG+   +A KK +  K  KDPNKPKRP SAFFVFMEEFRK +KEKHP+NKSV+VVGKA
Sbjct: 19  VKKGAAATKAGKKTKKEKPVKDPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKA 78

Query: 406 GGDKW 392
           GGDKW
Sbjct: 79  GGDKW 83


>ref|XP_006425283.1| hypothetical protein CICLE_v10026715mg [Citrus clementina]
           gi|567865323|ref|XP_006425284.1| hypothetical protein
           CICLE_v10026715mg [Citrus clementina]
           gi|567865325|ref|XP_006425285.1| hypothetical protein
           CICLE_v10026715mg [Citrus clementina]
           gi|568825425|ref|XP_006467079.1| PREDICTED: HMG1/2-like
           protein-like [Citrus sinensis]
           gi|557527273|gb|ESR38523.1| hypothetical protein
           CICLE_v10026715mg [Citrus clementina]
           gi|557527274|gb|ESR38524.1| hypothetical protein
           CICLE_v10026715mg [Citrus clementina]
           gi|557527275|gb|ESR38525.1| hypothetical protein
           CICLE_v10026715mg [Citrus clementina]
          Length = 147

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 46/63 (73%), Positives = 49/63 (77%)
 Frame = -2

Query: 580 VKKGSERASKKPRNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGG 401
           +K    RA K+    KA KDPNKPKRPPSAFFVFMEEFRK FKE HPNNKSVA VGKA G
Sbjct: 17  LKSKGARAGKRTAKPKAAKDPNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAG 76

Query: 400 DKW 392
           +KW
Sbjct: 77  EKW 79


>tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
          Length = 119

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFMEEFRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
          Length = 123

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFMEEFRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
          Length = 118

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFMEEFRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
           gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
           gi|194698578|gb|ACF83373.1| unknown [Zea mays]
           gi|414886616|tpg|DAA62630.1| TPA: HMG-like
           nucleosome/chromatin assembly factor D [Zea mays]
          Length = 126

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFMEEFRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>ref|XP_006660948.1| PREDICTED: HMG1/2-like protein-like [Oryza brachyantha]
          Length = 127

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFME+FRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
           gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa
           Japonica Group] gi|113632102|dbj|BAF25783.1|
           Os09g0551600 [Oryza sativa Japonica Group]
           gi|213959176|gb|ACJ54922.1| HMG type
           nucleosome/chromatin assembly factor [Oryza sativa
           Japonica Group] gi|215694881|dbj|BAG90072.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 127

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFME+FRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67


>gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
          Length = 139

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 544 RNTKAEKDPNKPKRPPSAFFVFMEEFRKTFKEKHPNNKSVAVVGKAGGDKW 392
           R TKAEKDPNKPKRPPSAFFVFME+FRK +KEKHPN K V+V+GKAGGDKW
Sbjct: 17  RKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67