BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005268
         (1043 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|23...   124   5e-45
ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato ba...   119   1e-42
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|...   154   7e-35
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...   153   9e-35
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                   153   1e-34
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   153   1e-34
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               153   1e-34
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]               153   1e-34
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               152   2e-34
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   152   3e-34
gb|AAW30012.1| polyprotein [Citrus yellow mosaic virus]               150   6e-34
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   149   1e-33
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               149   1e-33
emb|CAA64701.1| polyprotein [Dioscorea bacilliform virus]             149   2e-33
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]            148   3e-33
emb|CAA64703.1| polyprotein [Dioscorea bacilliform virus]             148   4e-33
emb|CAA64275.1| unnamed protein product [Dioscorea bacilliform v...   147   5e-33
emb|CAA64274.1| unnamed protein product [Dioscorea bacilliform v...   147   7e-33
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]                    145   3e-32
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746...   145   3e-32

>ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|237846580|gb|ACN56751.1|
            polyprotein [Sweetpotato badnavirus B]
          Length = 771

 Score =  124 bits (312), Expect(2) = 5e-45
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            V+GK+RMV NYKRLND T KDQY+LP  NTI+ +V+  K++SKFDLKS FHQ+ M  +SI
Sbjct: 243  VRGKQRMVLNYKRLNDNTEKDQYSLPGINTIISRVAGKKVFSKFDLKSGFHQIRMSKESI 302

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
              T FW P+GLYE+LV+PFGL NAPA F  K
Sbjct: 303  PWTAFWTPDGLYEFLVMPFGLVNAPADFQRK 333



 Score = 84.7 bits (208), Expect(2) = 5e-45
 Identities = 43/70 (61%), Positives = 51/70 (72%)
 Frame = -2

Query: 790 PSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPMKMK 611
           P++F RKMDN F+GTE FIA+YIDDIL FS  E+ + QHL     IV+KN LILSP KMK
Sbjct: 327 PADFQRKMDNAFRGTEAFIAVYIDDILIFSETEEDHEQHLLKFAQIVEKNGLILSPTKMK 386

Query: 610 IAVPEVEVLG 581
           I V  V+ LG
Sbjct: 387 IGVKSVDFLG 396



 Score = 54.7 bits (130), Expect(2) = 3e-12
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -3

Query: 573 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
           KE++IRTDC AI+SFF K+A NKPS  R ++FTDYI+
Sbjct: 561 KEMVIRTDCQAIVSFFNKSASNKPSRARWISFTDYIT 597



 Score = 44.7 bits (104), Expect(2) = 3e-12
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -2

Query: 487 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVK 353
           +SF     G G  I  EHI+GKDN LAD LS L+  LI+ EW  +
Sbjct: 590 ISFTDYITGTGIKIRIEHIDGKDNTLADYLSRLVFSLIIAEWKTQ 634


>ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato badnavirus A]
            gi|237846574|gb|ACN56746.1| RNaseH/reverse transcriptase
            [Sweetpotato badnavirus A]
          Length = 794

 Score =  119 bits (297), Expect(2) = 1e-42
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            ++GK+RMV+NYKRLND T KDQY+LP  NTI+ ++S  KI+SKFDLK+ FHQ+ M   S 
Sbjct: 267  IRGKQRMVYNYKRLNDNTEKDQYSLPGINTIVSRISGKKIFSKFDLKAGFHQIRMEEKSK 326

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
              T FW P GLYE+ V+PFGL NAPA F  K
Sbjct: 327  PWTAFWTPEGLYEFEVMPFGLMNAPADFQRK 357



 Score = 82.4 bits (202), Expect(2) = 1e-42
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = -2

Query: 790 PSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPMKMK 611
           P++F RKMDN F+GT+ FIA+YIDDIL FS +E+ +  HL  L  IV++  LILSP KMK
Sbjct: 351 PADFQRKMDNAFRGTDAFIAVYIDDILVFSENEEEHEDHLLNLAQIVRREGLILSPTKMK 410

Query: 610 IAVPEVEVLG 581
           I V EV+ LG
Sbjct: 411 IGVKEVDFLG 420



 Score = 55.1 bits (131), Expect(2) = 5e-13
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -3

Query: 573 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
           KE+IIRTDC AI+SFF K+A NKPS  R ++FTDYI+
Sbjct: 585 KEMIIRTDCEAIVSFFNKSASNKPSRARWISFTDYIT 621



 Score = 46.6 bits (109), Expect(2) = 5e-13
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = -2

Query: 487 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 308
           +SF     G G  I  EHI+GKDN LAD LS L+  LI+ EW  +      L AP +   
Sbjct: 614 ISFTDYITGTGIKIRIEHIDGKDNILADYLSRLVFSLIIAEWKTQEKSIAPLQAPRITLT 673

Query: 307 QENPNREAKVQMIQALA 257
           + + +++ +  +++ L+
Sbjct: 674 KXSCSKQQEPLLLRELS 690


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
            polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  154 bits (388), Expect = 7e-35
 Identities = 70/91 (76%), Positives = 80/91 (87%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            +K KERMVFNYKRLND+T+KDQY+LP  NTIL+KV  SKI+SKFDLKS FHQV MHPDSI
Sbjct: 1328 IKRKERMVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSI 1387

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAP++F  K
Sbjct: 1388 EWTAFWVPDGLYEWLVMPFGLKNAPSVFQRK 1418



 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  PS F RKMD CFKGTE+FIA+YIDDIL FS +E+ + +HL+ +L+I ++N L+LSP 
Sbjct: 1409 KNAPSVFQRKMDECFKGTEDFIAVYIDDILVFSENEKDHAKHLKAMLEICKRNGLVLSPS 1468

Query: 619  KMKIAVPEVEVLGA 578
            KMKIAV EVE LGA
Sbjct: 1469 KMKIAVQEVEFLGA 1482



 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 308
            V+F     GIG ++ FEHI+G+DN LAD+LS LIN   + EWS+K     E     L++L
Sbjct: 1675 VAFTDFITGIGINVEFEHIDGRDNVLADSLSRLINSFFLTEWSLK----KEEAVAELEKL 1730

Query: 307  QENPNREAKVQMIQALATLSSSLNNINNF------CIDSTQSHWKTTIDLTNNSMHYNSK 146
             E  +++ + Q++  +  +++  NN            D  +     T++  NNS      
Sbjct: 1731 ME--DKQCRKQLLPLINKMTNCFNNTRTLLRKEKGSFDQEEYLLPETMNSENNSGRLKKN 1788

Query: 145  L*FKLQMLSSSLGYSTP*KDKSARKEVPPTTGGWIGI 35
            L  +     ++ G  T  K  +    V P   G IG+
Sbjct: 1789 LQEEPLKPWNNTGRFTHLKQPNVHHGVHPEGMGIIGL 1825



 Score = 56.6 bits (135), Expect(2) = 1e-16
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -3

Query: 600  QKWKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K K   LDK ELIIRTDC AIISFF K+A NKPS VR +AFTD+I+
Sbjct: 1636 EKLKIYYLDKKELIIRTDCQAIISFFNKSALNKPSRVRWVAFTDFIT 1682


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
            gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
            yellow mosaic virus]
          Length = 1983

 Score =  153 bits (387), Expect = 9e-35
 Identities = 72/91 (79%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1453 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1512

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPAIF  K
Sbjct: 1513 EWTAFWVPSGLYEWLVMPFGLKNAPAIFQRK 1543



 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  EQ + +HL+ +L I QKN LILSP 
Sbjct: 1534 KNAPAIFQRKMDHCFKGTEAFIAVYIDDILVFSKTEQDHEKHLQIMLAICQKNGLILSPT 1593

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E LGA
Sbjct: 1594 KMKIAQAEIEFLGA 1607



 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1763 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1807



 Score = 45.1 bits (105), Expect(2) = 2e-10
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   LQ
Sbjct: 1800 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1859

Query: 313  ELQENPNREAKVQMIQALATLSSSLNNINNFCIDSTQS 200
            E +E P +   V+ +  L   +  +     F  DS+ S
Sbjct: 1860 EKKEAP-QAMHVEYVSLLIRSADRITRSLCFMRDSSHS 1896


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score =  153 bits (386), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1445 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1504

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1505 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1535



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 43/74 (58%), Positives = 53/74 (71%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FSL E  + +HL+ +L I QKN LILSP 
Sbjct: 1526 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSLTEWEHGEHLKIMLSICQKNGLILSPT 1585

Query: 619  KMKIAVPEVEVLGA 578
            +M  A   +E LGA
Sbjct: 1586 EMIFAHVGIEFLGA 1599



 Score = 39.3 bits (90), Expect(2) = 9e-06
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTD 472
            +K   LDK  L +RTDC AIISFF K+    PS  R +AFTD
Sbjct: 1756 FKIYYLDKSSLCLRTDCQAIISFFNKSNVKMPSRFRWIAFTD 1797



 Score = 37.7 bits (86), Expect(2) = 9e-06
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVK--ILEDLELVAPTLQ 314
            ++F  L  G+   ++  HI+G++N L DALS L+   +V E   +    +DL  +   LQ
Sbjct: 1793 IAFTDLFTGLSIPVNLVHIDGQNNPLGDALSRLVTGFVVAEPQCQDSFQDDLGKLEAALQ 1852

Query: 313  ELQENP 296
            E +E P
Sbjct: 1853 EKKEAP 1858


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  153 bits (386), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1452 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1511

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1512 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1542



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDI  FS  EQ + ++L+ +L I QKN LILSP 
Sbjct: 1533 KNAPAVFQRKMDHCFKGTEAFIAVYIDDIQVFSKTEQDHEEYLQIMLSICQKNGLILSPT 1592

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+  LGA
Sbjct: 1593 KMKIAQAEIGFLGA 1606



 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1762 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1806



 Score = 45.1 bits (105), Expect(2) = 2e-10
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   LQ
Sbjct: 1799 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1858

Query: 313  ELQENPNREAKVQMIQALATLSSSLNNINNFCIDSTQS 200
            E +E P +   V+ +  L   +  +     F  DS+ S
Sbjct: 1859 EKKEAP-QAMHVEYVSLLIRSADRITRSLCFMRDSSHS 1895


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  153 bits (386), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1437 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1496

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1497 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1527



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  E+ + +HL+ +L I QKN LILSP 
Sbjct: 1518 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKSEREHEEHLKIMLSICQKNGLILSPT 1577

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E LGA
Sbjct: 1578 KMKIAQVEIEFLGA 1591



 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1747 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1791



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   LQ
Sbjct: 1784 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1843

Query: 313  ELQENP 296
            E +E P
Sbjct: 1844 EKKEAP 1849


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score =  153 bits (386), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1445 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1504

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1505 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1535



 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  E+ + +HL+ +L I QKN LILSP 
Sbjct: 1526 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEREHEEHLQIMLSICQKNGLILSPT 1585

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E LGA
Sbjct: 1586 KMKIAQAEIEFLGA 1599



 Score = 48.1 bits (113), Expect(2) = 3e-09
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1756 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1800



 Score = 40.8 bits (94), Expect(2) = 3e-09
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   L 
Sbjct: 1793 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALL 1852

Query: 313  ELQENP 296
            E +E P
Sbjct: 1853 EKKEAP 1858


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  152 bits (385), Expect = 2e-34
 Identities = 70/91 (76%), Positives = 79/91 (86%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDS+
Sbjct: 1438 VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSV 1497

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1498 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1528



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  E+ + +HL+ +L I Q+N LILSP 
Sbjct: 1519 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEKEHEEHLQIMLSICQRNGLILSPT 1578

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E LGA
Sbjct: 1579 KMKIAQAEIEFLGA 1592



 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1748 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1792



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   LQ
Sbjct: 1785 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGRLEAALQ 1844

Query: 313  ELQENP 296
            E +E P
Sbjct: 1845 EKKEAP 1850


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
            gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
            bacilliform virus GD1]
          Length = 1892

 Score =  152 bits (383), Expect = 3e-34
 Identities = 69/90 (76%), Positives = 79/90 (87%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLNDLT KDQY+LP  NTI+++V  +KIYSKFDLKS FHQV MHP+SI+
Sbjct: 1387 KGKERMVFNYKRLNDLTEKDQYSLPGINTIMKRVGHAKIYSKFDLKSGFHQVAMHPESIK 1446

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1447 WTAFWVPDGLYEWLVMPFGLKNAPAVFQRK 1476



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMDN FKGTE FIA+YIDDIL FS  E+ +++H+R +L+  ++N L+LSP 
Sbjct: 1467 KNAPAVFQRKMDNVFKGTEAFIAVYIDDILVFSQSEEEHIKHIRVMLEKCRENGLVLSPT 1526

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  +VE LGA
Sbjct: 1527 KMKIAQRKVEFLGA 1540



 Score = 43.1 bits (100), Expect(2) = 7e-08
 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -3

Query: 579  LDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            LDK  L IRTDC AII+FF   +++KPS +R + FTDY++
Sbjct: 1701 LDKPSLTIRTDCQAIIAFFDTISNHKPSRLRWINFTDYVT 1740



 Score = 41.2 bits (95), Expect(2) = 7e-08
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 308
            ++F     G+G  ++F+H++G+DN+LADALS LI+  ++ E   +  E+   +    Q +
Sbjct: 1733 INFTDYVTGLGIPVNFQHVKGEDNRLADALSRLIS--VIFEAGQQWQEESTRMQHLTQLI 1790

Query: 307  QENPNREAKVQMIQAL-----ATLSSSLNNINNFCIDSTQ 203
             E+   EA  +    L     A ++S++N+     + STQ
Sbjct: 1791 GEHYKFEASGKKHHQLKETLTALITSTMNSWTEKSLSSTQ 1830


>gb|AAW30012.1| polyprotein [Citrus yellow mosaic virus]
          Length = 357

 Score =  150 bits (380), Expect = 6e-34
 Identities = 70/91 (76%), Positives = 78/91 (85%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 246  VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 305

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+P GLKNAPA+F  K
Sbjct: 306  EWTAFWVPSGLYEWLVMPLGLKNAPAVFQRK 336


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  149 bits (377), Expect = 1e-33
 Identities = 69/91 (75%), Positives = 78/91 (85%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVFNYKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS F QV MHPDS+
Sbjct: 960  VKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFQQVAMHPDSV 1019

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1020 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1050



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  E+ + +HL+ +L I Q+N LILSP 
Sbjct: 1041 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEKEHEEHLQIMLSICQRNGLILSPT 1100

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E LGA
Sbjct: 1101 KMKIAQAEIEFLGA 1114



 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1270 FKIYYLDKPSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1314



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   LQ
Sbjct: 1307 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1366

Query: 313  ELQENP 296
            E +E P
Sbjct: 1367 EKKEAP 1372


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  149 bits (377), Expect = 1e-33
 Identities = 70/91 (76%), Positives = 78/91 (85%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKERMVF YKRLNDLTNKDQY+LP   TIL+++  S I+SKFDLKS FHQV MHPDSI
Sbjct: 1447 VKGKERMVFIYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSI 1506

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 1507 EWTAFWVPSGLYEWLVMPFGLKNAPAVFQRK 1537



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 45/74 (60%), Positives = 55/74 (74%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMD+CFKGTE FIA+YIDDIL FS  E+ + +HL+ +L I QKN LILSP 
Sbjct: 1528 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEREHEEHLQIMLSICQKNGLILSPT 1587

Query: 619  KMKIAVPEVEVLGA 578
            KMKIA  E+E  GA
Sbjct: 1588 KMKIAQAEIEFPGA 1601



 Score = 48.1 bits (113), Expect(2) = 3e-09
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 594  WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K   LDK  L +RTDC AIISFF K+  NKPS VR +AFTD+++
Sbjct: 1759 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1803



 Score = 40.8 bits (94), Expect(2) = 3e-09
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 314
            ++F     G+G  ++ EHI+GK+N LADALS L+   +  E     K  +DL  +   L 
Sbjct: 1796 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALL 1855

Query: 313  ELQENP 296
            E +E P
Sbjct: 1856 EKKEAP 1861


>emb|CAA64701.1| polyprotein [Dioscorea bacilliform virus]
          Length = 338

 Score =  149 bits (375), Expect = 2e-33
 Identities = 71/90 (78%), Positives = 76/90 (84%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLND T KDQY+LP  NTIL+KV  SKIYSKFDLKS FHQV MHPDSI+
Sbjct: 188  KGKERMVFNYKRLNDNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQ 247

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T F VP GLYEWLV+PFGLKNAPA+F  K
Sbjct: 248  WTAFCVPGGLYEWLVMPFGLKNAPAVFQGK 277



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = -2

Query: 799 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
           +  P+ F  KMDNCF+GTE+FIA+YIDDIL FS   + + +HL  +L I +++ L+LSP 
Sbjct: 268 KNAPAVFQGKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 327

Query: 619 KMKIAVPEVE 590
           KMKI  P VE
Sbjct: 328 KMKIGTPTVE 337


>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
          Length = 1395

 Score =  148 bits (374), Expect = 3e-33
 Identities = 70/90 (77%), Positives = 76/90 (84%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLND T KDQY+LP  NTIL+KV  SKIYSKFDLKS FHQV MHPDSI+
Sbjct: 964  KGKERMVFNYKRLNDNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQ 1023

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T F VP GLYEWLV+PFGLKNAP++F  K
Sbjct: 1024 WTAFCVPGGLYEWLVMPFGLKNAPSVFQRK 1053



 Score = 87.4 bits (215), Expect = 8e-15
 Identities = 42/74 (56%), Positives = 54/74 (72%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  PS F RKMDNCF+GTE+FIA+YIDDIL FS   + + +HL  +L I +++ L+LSP 
Sbjct: 1044 KNAPSVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 1103

Query: 619  KMKIAVPEVEVLGA 578
            KMKI  P VE LGA
Sbjct: 1104 KMKIGTPTVEFLGA 1117



 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -3

Query: 597  KWKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            K+K   LDK EL+IRTDC AI++F+ K++ NKPS VR +AF D+++
Sbjct: 1272 KFKIHYLDKKELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLT 1317



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = -2

Query: 487  VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIV---LEWSVKILEDLELVAPTL 317
            ++F     G+G  +  EHI+GKDN LADALS L+ C I+     W  K  E L      L
Sbjct: 1310 IAFNDFLTGLGIPVTIEHIDGKDNVLADALSRLV-CSIIKNPAHWQDK-GELLRQTEEAL 1367

Query: 316  QELQENPNREA 284
            Q++ + P+  A
Sbjct: 1368 QQIMKKPHHGA 1378


>emb|CAA64703.1| polyprotein [Dioscorea bacilliform virus]
          Length = 338

 Score =  148 bits (373), Expect = 4e-33
 Identities = 69/90 (76%), Positives = 76/90 (84%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLND T KDQY+LP  NTIL+KV  SKIYSKFDLKS FHQV MHPDS++
Sbjct: 188  KGKERMVFNYKRLNDNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSVQ 247

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T F VP GLYEWLV+PFGLKNAP++F  K
Sbjct: 248  WTAFCVPGGLYEWLVMPFGLKNAPSVFQRK 277



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 39/70 (55%), Positives = 51/70 (72%)
 Frame = -2

Query: 799 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
           +  PS F RKMDNCF+GTE+FIA+YIDDIL FS   + + +HL  +L I +++ L+LSP 
Sbjct: 268 KNAPSVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 327

Query: 619 KMKIAVPEVE 590
           KMKI  P VE
Sbjct: 328 KMKIGTPTVE 337


>emb|CAA64275.1| unnamed protein product [Dioscorea bacilliform virus]
          Length = 338

 Score =  147 bits (372), Expect = 5e-33
 Identities = 70/90 (77%), Positives = 75/90 (83%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLND T KDQY+LP  NTIL+KV   KIYSKFDLKS FHQV MHPDSI+
Sbjct: 188  KGKERMVFNYKRLNDNTEKDQYSLPGINTILKKVGNMKIYSKFDLKSGFHQVAMHPDSIQ 247

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T F VP GLYEWLV+PFGLKNAPA+F  K
Sbjct: 248  WTAFCVPGGLYEWLVMPFGLKNAPAVFQRK 277



 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -2

Query: 799 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
           +  P+ F RKMD CF+GTE+FIA+Y DDIL FS   + + +HL  +L I +++ L+LSP 
Sbjct: 268 KNAPAVFQRKMDGCFRGTEDFIAVYFDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPR 327

Query: 619 KMKIAVPEVE 590
           KMKI  P VE
Sbjct: 328 KMKIGTPTVE 337


>emb|CAA64274.1| unnamed protein product [Dioscorea bacilliform virus]
          Length = 338

 Score =  147 bits (371), Expect = 7e-33
 Identities = 70/90 (77%), Positives = 75/90 (83%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKE MVFNYKRLND T KDQY+LP  NTIL+KV  SKIYSKFDLKS FHQV MHPDSI+
Sbjct: 188  KGKETMVFNYKRLNDNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQ 247

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T F VP GLYEWLV+PFGLKNAPA+F  K
Sbjct: 248  WTAFCVPGGLYEWLVMPFGLKNAPAVFQRK 277



 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 38/70 (54%), Positives = 51/70 (72%)
 Frame = -2

Query: 799 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
           +  P+ F RKMDNCF+GTE+FIA+YIDDIL FS   + + +HL  +L I +++ L+LSP 
Sbjct: 268 KNAPAVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPR 327

Query: 619 KMKIAVPEVE 590
           KMKI  P VE
Sbjct: 328 KMKIGTPTVE 337


>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
          Length = 579

 Score =  145 bits (366), Expect = 3e-32
 Identities = 67/90 (74%), Positives = 76/90 (84%)
 Frame = -3

Query: 1038 KGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIE 859
            KGKERMVFNYKRLND T KDQY+LP  NTIL+++  S IYSKFDLKS FHQV M P+SI+
Sbjct: 278  KGKERMVFNYKRLNDNTEKDQYSLPGINTILKRIGQSVIYSKFDLKSGFHQVAMDPESIQ 337

Query: 858  RTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
             T FWVP+GLYEWLV+PFGLKNAPA+F  K
Sbjct: 338  WTAFWVPDGLYEWLVMPFGLKNAPAVFQRK 367



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = -2

Query: 799 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
           +  P+ F RKMDNCF+GTE+FIA+YIDDIL FS  ++ + QHL+ +L+I ++N L+LSP 
Sbjct: 358 KNAPAVFQRKMDNCFRGTEDFIAVYIDDILVFSRSQEEHAQHLKQMLEICRRNGLVLSPT 417

Query: 619 KMKIAVPEVEVLGA 578
           KMKI    VE LGA
Sbjct: 418 KMKIGTQVVEFLGA 431


>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
            [Piper yellow mottle virus]
          Length = 1925

 Score =  145 bits (365), Expect = 3e-32
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = -3

Query: 1041 VKGKERMVFNYKRLNDLTNKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSI 862
            VKGKER+VFNYKRLND TNKDQY+LP  NTI+ KV  SK++SKFDLKS FHQV M P+SI
Sbjct: 1444 VKGKERLVFNYKRLNDNTNKDQYSLPGINTIISKVGNSKVFSKFDLKSGFHQVAMDPESI 1503

Query: 861  ERTTFWVPNGLYEWLVIPFGLKNAPAIFNEK 769
            E T F  PNGLYEWLV+PFGLKNAPA+F  K
Sbjct: 1504 EWTAFSTPNGLYEWLVMPFGLKNAPAVFQRK 1534



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 799  EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 620
            +  P+ F RKMDNCFKG E+FIA+YIDDIL FS + + + QHL  +L++ +KN LILSP 
Sbjct: 1525 KNAPAVFQRKMDNCFKGMEDFIAVYIDDILVFSENMRDHAQHLVAMLEVCKKNGLILSPT 1584

Query: 619  KMKIAVPEVEVLGA 578
            KMKI +  ++ LGA
Sbjct: 1585 KMKIGLGTIDFLGA 1598



 Score = 55.5 bits (132), Expect(2) = 1e-12
 Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -3

Query: 600  QKWKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 463
            +K K   LDK E+IIRTDC AIISFF K++ NKPS VR + FTDYI+
Sbjct: 1752 EKLKIYYLDKREIIIRTDCQAIISFFNKSSVNKPSRVRWIGFTDYIT 1798



 Score = 44.7 bits (104), Expect(2) = 1e-12
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
 Frame = -2

Query: 463  GIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQ----ELQENP 296
            G+G  + F+HI+GK+N LAD+LS L  C ++ +W       LE V  T++    + Q+NP
Sbjct: 1799 GLGIDVKFQHIDGKENSLADSLSRL-TCSLIRQW-----HHLEPVITTMEAALVQEQQNP 1852

Query: 295  NREAKVQMIQALATLSSSLNNINN 224
               +   + QAL   +  L++I++
Sbjct: 1853 TPGSTKALKQALHQANQWLSSISS 1876