BLASTX nr result

ID: Zingiber24_contig00005188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005188
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360356.1| PREDICTED: cyclin-dependent kinase inhibitor...    58   1e-06
ref|NP_001233980.1| p27KIP1-related-protein 1 [Solanum lycopersi...    56   6e-06

>ref|XP_006360356.1| PREDICTED: cyclin-dependent kinase inhibitor 4-like [Solanum
           tuberosum]
          Length = 209

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
 Frame = +3

Query: 15  IGVLTXXXXXXXXXQDSHLAYLELRSRRLEKPLSPPRAFKPKATAPREPSTINANPRIIP 194
           +GVLT          D   +YLELRSRRL KP +     + K   P+ P+ +N NP  IP
Sbjct: 17  LGVLTRAKALALNGGDGG-SYLELRSRRLVKPFAVLEGRRQKNGVPKNPNLVNPNPNQIP 75

Query: 195 LNAGTSNSGREVSCRSKDLEKERSPVVEVSCADSNL----XXXXXXXXXXXXXLIRDSET 362
                S  G+ V       EKE+S +         L                 LIRDS+ 
Sbjct: 76  NVCVNSEEGKGVKEMENQKEKEKSCLGPEDSFGEKLLEFEGRKRTTRESTPCSLIRDSDN 135

Query: 363 IRTPDSSTR 389
           I+TP SSTR
Sbjct: 136 IQTPGSSTR 144


>ref|NP_001233980.1| p27KIP1-related-protein 1 [Solanum lycopersicum]
           gi|23899378|emb|CAD29648.1| p27KIP1-related-protein 1
           [Solanum lycopersicum]
          Length = 210

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
 Frame = +3

Query: 15  IGVLTXXXXXXXXXQDSHLAYLELRSRRLEKPLSPPRAFKPKATAPREPSTINANP-RII 191
           +GVLT          D   +YLELRSRRL KP +     + K   P+ P+ +N NP + I
Sbjct: 17  LGVLTRAKALALNGGDGG-SYLELRSRRLVKPFTVLEGRRQKNGVPKNPNLVNPNPNQQI 75

Query: 192 PLNAGTSNSGREVSCRSKDLEKERSPVVEVSCADSNL----XXXXXXXXXXXXXLIRDSE 359
           P     S  G+ V       EKE+S +        NL                 LIRDS+
Sbjct: 76  PNVCVNSEEGKGVKEMENQKEKEKSCLGPEDSFGENLLEFEGRKRTTRESTPCSLIRDSD 135

Query: 360 TIRTPDSSTR 389
            I+TP SSTR
Sbjct: 136 NIQTPGSSTR 145


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