BLASTX nr result
ID: Zingiber24_contig00005188
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00005188 (393 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006360356.1| PREDICTED: cyclin-dependent kinase inhibitor... 58 1e-06 ref|NP_001233980.1| p27KIP1-related-protein 1 [Solanum lycopersi... 56 6e-06 >ref|XP_006360356.1| PREDICTED: cyclin-dependent kinase inhibitor 4-like [Solanum tuberosum] Length = 209 Score = 57.8 bits (138), Expect = 1e-06 Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Frame = +3 Query: 15 IGVLTXXXXXXXXXQDSHLAYLELRSRRLEKPLSPPRAFKPKATAPREPSTINANPRIIP 194 +GVLT D +YLELRSRRL KP + + K P+ P+ +N NP IP Sbjct: 17 LGVLTRAKALALNGGDGG-SYLELRSRRLVKPFAVLEGRRQKNGVPKNPNLVNPNPNQIP 75 Query: 195 LNAGTSNSGREVSCRSKDLEKERSPVVEVSCADSNL----XXXXXXXXXXXXXLIRDSET 362 S G+ V EKE+S + L LIRDS+ Sbjct: 76 NVCVNSEEGKGVKEMENQKEKEKSCLGPEDSFGEKLLEFEGRKRTTRESTPCSLIRDSDN 135 Query: 363 IRTPDSSTR 389 I+TP SSTR Sbjct: 136 IQTPGSSTR 144 >ref|NP_001233980.1| p27KIP1-related-protein 1 [Solanum lycopersicum] gi|23899378|emb|CAD29648.1| p27KIP1-related-protein 1 [Solanum lycopersicum] Length = 210 Score = 55.8 bits (133), Expect = 6e-06 Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Frame = +3 Query: 15 IGVLTXXXXXXXXXQDSHLAYLELRSRRLEKPLSPPRAFKPKATAPREPSTINANP-RII 191 +GVLT D +YLELRSRRL KP + + K P+ P+ +N NP + I Sbjct: 17 LGVLTRAKALALNGGDGG-SYLELRSRRLVKPFTVLEGRRQKNGVPKNPNLVNPNPNQQI 75 Query: 192 PLNAGTSNSGREVSCRSKDLEKERSPVVEVSCADSNL----XXXXXXXXXXXXXLIRDSE 359 P S G+ V EKE+S + NL LIRDS+ Sbjct: 76 PNVCVNSEEGKGVKEMENQKEKEKSCLGPEDSFGENLLEFEGRKRTTRESTPCSLIRDSD 135 Query: 360 TIRTPDSSTR 389 I+TP SSTR Sbjct: 136 NIQTPGSSTR 145