BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005143
         (2225 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36631.1| C2H2L domain class transcription factor [Malus do...   271   1e-69
gb|EOY27229.1| Transcription initiation factor TFIID subunit A i...   204   1e-49
gb|EOY27231.1| Transcription initiation factor TFIID subunit A i...   203   3e-49
ref|XP_002304140.1| transcription initiation factor IID subunit ...   201   1e-48
gb|EMJ18178.1| hypothetical protein PRUPE_ppa002765mg [Prunus pe...   200   2e-48
ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296...   199   4e-48
gb|EOY27232.1| Transcription initiation factor TFIID subunit A i...   199   6e-48
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...   195   8e-47
gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 ...   194   1e-46
ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258...   194   2e-46
ref|XP_002521336.1| protein with unknown function [Ricinus commu...   194   2e-46
ref|NP_001275310.1| transcription initiation factor TFIID subuni...   193   2e-46
ref|XP_006465927.1| PREDICTED: transcription initiation factor T...   191   1e-45
sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation f...   191   1e-45
ref|NP_564023.1| transcription initiation factor TFIID subunit 1...   191   1e-45
ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arab...   190   2e-45
ref|XP_006426645.1| hypothetical protein CICLE_v10025234mg [Citr...   189   3e-45
ref|XP_006416703.1| hypothetical protein EUTSA_v10006997mg [Eutr...   189   4e-45
ref|XP_006846365.1| hypothetical protein AMTR_s00012p00261940 [A...   187   1e-44
ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227...   187   1e-44

>gb|ADL36631.1| C2H2L domain class transcription factor [Malus domestica]
          Length = 630

 Score =  271 bits (692), Expect = 1e-69
 Identities = 190/490 (38%), Positives = 238/490 (48%), Gaps = 24/490 (4%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXG-------RSGIITQAAQLPMLP 1579
            MRQ  G+YG QVNF                               RS +I Q+  LPML 
Sbjct: 144  MRQQGGLYG-QVNFGGPGGIQQQNQQQQQQNQAQQTQQLGGGNLSRSALIGQSGHLPMLS 202

Query: 1578 ---TQTTQHFNLQSQMLTQPRQKG-LVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQL 1411
                     FNLQ Q+L  PRQKG LVQ  QF+ GNS  Q+LQG Q MG++ +++++ QL
Sbjct: 203  GPAAVAAAQFNLQPQLLASPRQKGSLVQGSQFHHGNSPGQSLQGTQAMGVMGSINLSSQL 262

Query: 1410 RAYNXXXXXXXXXXXXXXXQMTLTSPQKLP-----GQSLPRAPSAAALNSQVSGLTQNGQ 1246
            RA                 Q+     Q+ P      QSLPR  S + +N Q+SG++QNGQ
Sbjct: 263  RANGAIASFAQQRINQGQGQLRQQLAQQSPLTSAQVQSLPRTSSLSFMNPQLSGVSQNGQ 322

Query: 1245 STIVQTTLSQQQQWLKHLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHQKSMALT 1066
              ++Q +LSQQ  WLK +                                   QKSM LT
Sbjct: 323  PAMIQNSLSQQ--WLKQMPASPGPGSPSPSPSSRLQQHRQQVLYQQQLASNQLQKSMPLT 380

Query: 1065 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------PKLSGSAVQ 904
            P                                                  P+++G A Q
Sbjct: 381  PQQFNQLVQQQQQMGHPQLQQQQHQQQLQQQQIQQPLQQQSQQQQQQQLSSPRMAGPAGQ 440

Query: 903  KPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHGKLDPEVEDL 730
            K LSLTGS  +A A              EATNQLLGKRKI DLV QVD  G+LDPEVEDL
Sbjct: 441  KSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGRLDPEVEDL 500

Query: 729  LLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSREDRKYLKTPL 550
            LL+IADDFIDSVTT+AC+LAKHRKSSTL++KDVLLHLEKNW+LT+PG+S E+RK     L
Sbjct: 501  LLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSEERKCQNKSL 560

Query: 549  SSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPINPSPSSEQLSLPVVA 370
            SSD+HK+RL  I+   E+  LE +    K   +   N  G++H I PS  +EQL      
Sbjct: 561  SSDLHKKRLDVIRTLMESSNLEKNPNTPKEMIRGFGNAVGTNHLIRPSLGAEQLVSQSTG 620

Query: 369  SQTTHKPQRF 340
            SQ   +  RF
Sbjct: 621  SQMLQQMTRF 630


>gb|EOY27229.1| Transcription initiation factor TFIID subunit A isoform 1 [Theobroma
            cacao]
          Length = 670

 Score =  204 bits (519), Expect = 1e-49
 Identities = 116/200 (58%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P++ G A QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD  G
Sbjct: 472  PRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 531

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KL+PEVEDLLL+IADDFIDSVTTFACSLAKHRKSSTL++KD+LLHLEKNW LT+PG+S E
Sbjct: 532  KLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWRLTIPGFSSE 591

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            +R   + PLSSD+HK+RL  I+   E+ Q E  A   K   +Q L N  G++H + PSPS
Sbjct: 592  ERNQTR-PLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNPVGANHLMRPSPS 650

Query: 399  SEQLSLPVVASQTTHKPQRF 340
            SEQL      SQ   +  R+
Sbjct: 651  SEQLVSQAAGSQMLQQITRY 670



 Score = 99.0 bits (245), Expect = 8e-18
 Identities = 76/191 (39%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXG-RSGIITQAAQLPMLP---TQT 1570
            +RQ AG+YG Q+NF                         RS +I Q+  LPML       
Sbjct: 183  LRQQAGLYG-QMNFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAA 241

Query: 1569 TQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA---- 1405
                +LQ Q+L  PRQK GLVQ  QF+PGN + Q+LQGMQ MG+   ++++ QLRA    
Sbjct: 242  AAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGM---MNLSSQLRANGNL 298

Query: 1404 YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTT 1225
            Y                Q  LTSPQ    QSLPR  S A +N Q+SGL Q+GQ  ++Q +
Sbjct: 299  YAQHRINQGQMRQQLSQQTQLTSPQV---QSLPRTSSQAFINPQLSGLAQSGQPGMMQNS 355

Query: 1224 LSQQQQWLKHL 1192
            L  QQQWLK +
Sbjct: 356  L-LQQQWLKQM 365


>gb|EOY27231.1| Transcription initiation factor TFIID subunit A isoform 3 [Theobroma
            cacao]
          Length = 671

 Score =  203 bits (516), Expect = 3e-49
 Identities = 115/192 (59%), Positives = 135/192 (70%), Gaps = 3/192 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P++ G A QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD  G
Sbjct: 472  PRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 531

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KL+PEVEDLLL+IADDFIDSVTTFACSLAKHRKSSTL++KD+LLHLEKNW LT+PG+S E
Sbjct: 532  KLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWRLTIPGFSSE 591

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            +R   + PLSSD+HK+RL  I+   E+ Q E  A   K   +Q L N  G++H + PSPS
Sbjct: 592  ERNQTR-PLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNPVGANHLMRPSPS 650

Query: 399  SEQLSLPVVASQ 364
            SEQL      SQ
Sbjct: 651  SEQLVSQAAGSQ 662



 Score = 99.0 bits (245), Expect = 8e-18
 Identities = 76/191 (39%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXG-RSGIITQAAQLPMLP---TQT 1570
            +RQ AG+YG Q+NF                         RS +I Q+  LPML       
Sbjct: 183  LRQQAGLYG-QMNFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAA 241

Query: 1569 TQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA---- 1405
                +LQ Q+L  PRQK GLVQ  QF+PGN + Q+LQGMQ MG+   ++++ QLRA    
Sbjct: 242  AAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGM---MNLSSQLRANGNL 298

Query: 1404 YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTT 1225
            Y                Q  LTSPQ    QSLPR  S A +N Q+SGL Q+GQ  ++Q +
Sbjct: 299  YAQHRINQGQMRQQLSQQTQLTSPQV---QSLPRTSSQAFINPQLSGLAQSGQPGMMQNS 355

Query: 1224 LSQQQQWLKHL 1192
            L  QQQWLK +
Sbjct: 356  L-LQQQWLKQM 365


>ref|XP_002304140.1| transcription initiation factor IID subunit A family protein [Populus
            trichocarpa] gi|222841572|gb|EEE79119.1| transcription
            initiation factor IID subunit A family protein [Populus
            trichocarpa]
          Length = 655

 Score =  201 bits (510), Expect = 1e-48
 Identities = 113/197 (57%), Positives = 135/197 (68%), Gaps = 3/197 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P++ G   QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD HG
Sbjct: 426  PRMPGPPGQKTLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSHG 485

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDPEVE+L L+IADDFIDSVT FACSLAKHRKSSTL++KD+LLHLEKNW+LT+PG+S E
Sbjct: 486  KLDPEVEELFLEIADDFIDSVTAFACSLAKHRKSSTLESKDILLHLEKNWHLTIPGFSSE 545

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSG-SDHPINPSPS 400
            +RK+   PL SD+HK+RL  I+   E+ Q E +    K   +Q   N   ++H I PSPS
Sbjct: 546  ERKHQSKPLPSDLHKKRLDMIRALMESSQSEENNINPKEMIRQGHGNPAVTNHLIRPSPS 605

Query: 399  SEQLSLPVVASQTTHKP 349
            SEQL      SQ+T  P
Sbjct: 606  SEQL-----VSQSTGSP 617



 Score = 85.5 bits (210), Expect = 9e-14
 Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLP----TQTTQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQG 1459
            RS ++ Q   LPM             NL SQ+L  PRQK GL Q  QF+ G+S  Q+LQG
Sbjct: 173  RSALLGQTGHLPMFTGAAAAAAAAQLNLPSQLLASPRQKAGLAQGSQFHSGDSPGQSLQG 232

Query: 1458 MQNMGIISNLSMNPQLR-----AYNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPS 1294
            +Q MG++ +     QLR     AY                Q +LTS      QSL R  S
Sbjct: 233  IQAMGVMGSSLNLSQLRPNGALAYAQQRMSAGSMRQQLVQQNSLTSQV----QSLQRTQS 288

Query: 1293 AAALNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
             A +N Q+SGL QN Q T++Q++LS QQQWLK +
Sbjct: 289  LAYMNHQMSGLAQNAQPTMMQSSLS-QQQWLKQM 321


>gb|EMJ18178.1| hypothetical protein PRUPE_ppa002765mg [Prunus persica]
          Length = 635

 Score =  200 bits (508), Expect = 2e-48
 Identities = 110/199 (55%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P+++  A QK LSLTGSQ +A A              EATNQLLGKRKI DLV Q+D  G
Sbjct: 438  PRMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQIDSQG 497

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            +LDPEVEDLLL+IADDFIDSVTT+AC+LAKHRKSSTL++KDVLLHLEKNWNLT+PG+S E
Sbjct: 498  RLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKNWNLTIPGFSSE 557

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPINPSPSS 397
            +RKY    LSSD+HK+RL  I+   E+  LE +    K   +   N  G++H + PS  +
Sbjct: 558  ERKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPKEMMRGFGNPVGANH-LRPSLGA 616

Query: 396  EQLSLPVVASQTTHKPQRF 340
            EQL      SQ   +  RF
Sbjct: 617  EQLVSQSTGSQMLQQMTRF 635



 Score =  107 bits (267), Expect = 2e-20
 Identities = 66/151 (43%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLPTQTT---QHFNLQSQMLTQPRQKG-LVQAGQFNPGNSSAQALQGM 1456
            RS ++ Q+  LPML +        FNLQ QML  PRQKG LVQ  QF+ GNS AQ+LQG 
Sbjct: 197  RSALMAQSGHLPMLSSAAAVAAAQFNLQPQMLASPRQKGGLVQGSQFHAGNSPAQSLQGT 256

Query: 1455 QNMGIISNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKLPG---QSLPRAPSAAA 1285
            Q MG++ +++++ QLRA                 +  L     L     QSLPR PS A 
Sbjct: 257  QAMGMMGSINLSSQLRANGALASFAQQRMNSGQLRQQLAQQSSLTSAQVQSLPRTPSLAF 316

Query: 1284 LNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            +N Q SG+TQNGQ  +VQ +LS  QQW K +
Sbjct: 317  MNPQPSGMTQNGQPAMVQNSLS--QQWFKQM 345


>ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296405 [Fragaria vesca
            subsp. vesca]
          Length = 629

 Score =  199 bits (506), Expect = 4e-48
 Identities = 111/199 (55%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P++   A QK LSLTGSQ +A A              EATNQLLGKRK+ DLV QVD  G
Sbjct: 431  PRMPVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKMQDLVSQVDSQG 490

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            +LD EVEDLLL+IADDFIDSVTTFACSLAKHRKSSTL++KDVLLHLEKNW+LT+PG+S E
Sbjct: 491  RLDSEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSE 550

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPINPSPSS 397
            +RKY    LSSD+HK+RL  I+   E+ Q E +    K   +   N  G++H I PS   
Sbjct: 551  ERKYQNKSLSSDVHKKRLDMIRMLMESSQPETNTNNPKEVIRGYGNPVGANHLIRPSLGG 610

Query: 396  EQLSLPVVASQTTHKPQRF 340
            EQL      SQ   +  RF
Sbjct: 611  EQLVSQATGSQMLQQMTRF 629



 Score = 94.4 bits (233), Expect = 2e-16
 Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLP--TQTTQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGMQ 1453
            R+ +++Q+ QLPML     T   FN+Q Q+L  PRQK GLVQ  QFN    S Q  Q M 
Sbjct: 182  RAALLSQSGQLPMLSGAAATAAQFNMQPQLLASPRQKSGLVQGTQFNSPGQSLQGTQAM- 240

Query: 1452 NMGIISNLSMNPQLRAYNXXXXXXXXXXXXXXXQM------TLTSPQKLPGQSLPRAPSA 1291
             MG++ ++++  QLRA                 +       +L SPQ L  Q+LPR  S 
Sbjct: 241  GMGMMGSINLTSQLRANGALAYAQQRLNQGGQLRQQLSQQSSLASPQVLHLQNLPRTSSL 300

Query: 1290 AALNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            A +N Q+SGL QNGQ  ++Q +LS  QQWLK +
Sbjct: 301  AFMNPQLSGLAQNGQPAMMQNSLS--QQWLKQM 331


>gb|EOY27232.1| Transcription initiation factor TFIID subunit A isoform 4 [Theobroma
            cacao]
          Length = 672

 Score =  199 bits (505), Expect = 6e-48
 Identities = 115/193 (59%), Positives = 135/193 (69%), Gaps = 4/193 (2%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLV-MQVDPH 760
            P++ G A QK LSLTGSQ +A A              EATNQLLGKRKI DLV  QVD  
Sbjct: 472  PRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQQVDSQ 531

Query: 759  GKLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSR 580
            GKL+PEVEDLLL+IADDFIDSVTTFACSLAKHRKSSTL++KD+LLHLEKNW LT+PG+S 
Sbjct: 532  GKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWRLTIPGFSS 591

Query: 579  EDRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSP 403
            E+R   + PLSSD+HK+RL  I+   E+ Q E  A   K   +Q L N  G++H + PSP
Sbjct: 592  EERNQTR-PLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNPVGANHLMRPSP 650

Query: 402  SSEQLSLPVVASQ 364
            SSEQL      SQ
Sbjct: 651  SSEQLVSQAAGSQ 663



 Score = 99.0 bits (245), Expect = 8e-18
 Identities = 76/191 (39%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXG-RSGIITQAAQLPMLP---TQT 1570
            +RQ AG+YG Q+NF                         RS +I Q+  LPML       
Sbjct: 183  LRQQAGLYG-QMNFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAA 241

Query: 1569 TQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA---- 1405
                +LQ Q+L  PRQK GLVQ  QF+PGN + Q+LQGMQ MG+   ++++ QLRA    
Sbjct: 242  AAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGM---MNLSSQLRANGNL 298

Query: 1404 YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTT 1225
            Y                Q  LTSPQ    QSLPR  S A +N Q+SGL Q+GQ  ++Q +
Sbjct: 299  YAQHRINQGQMRQQLSQQTQLTSPQV---QSLPRTSSQAFINPQLSGLAQSGQPGMMQNS 355

Query: 1224 LSQQQQWLKHL 1192
            L  QQQWLK +
Sbjct: 356  L-LQQQWLKQM 365


>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
           gi|297743015|emb|CBI35882.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  195 bits (495), Expect = 8e-47
 Identities = 108/202 (53%), Positives = 137/202 (67%), Gaps = 5/202 (2%)
 Frame = -3

Query: 930 PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
           P+++G A QK LSLTGSQ +A A              EA+NQLLGKRKI DLV QVD  G
Sbjct: 386 PRMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDSQG 445

Query: 756 KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
           KLDPEVEDLLL+IADDFIDSVTTFACSLAKHRKSSTL++KD+LLHLEKNW+L +PGYS E
Sbjct: 446 KLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWDLKIPGYSSE 505

Query: 576 DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPI---NPS 406
           ++K    P SS++HK+R+  ++   E+   E +A   +   + L NN    +P+   +PS
Sbjct: 506 EQKNQTKPSSSELHKKRVDMVRALMESSHSETNANAKEMMRQGLGNNPVGANPMMRPSPS 565

Query: 405 PSSEQLSLPVVASQTTHKPQRF 340
           PS+E L     +SQ   +  RF
Sbjct: 566 PSAEPLVSQSTSSQMLQQITRF 587



 Score = 89.0 bits (219), Expect = 8e-15
 Identities = 79/218 (36%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
 Frame = -3

Query: 1812 LQRSGSMTRXXXXXXXXXXXXXXXAM-RQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXX 1636
            LQRS SM+R                M RQ  GMY  Q+NF                    
Sbjct: 75   LQRSPSMSRINSMQSQTQQQQQQPMMVRQQTGMYS-QMNFGGSAIQQAQNQQQLGGGAAG 133

Query: 1635 XXXG----RSGIITQAAQL-PMLPTQTTQHFNL-QSQMLTQPRQK-GLVQAGQFNPGNSS 1477
               G    RS ++ Q   L PML  Q      + Q  +LT PRQK GLVQ  QF+PGN+ 
Sbjct: 134  GGGGGNLSRSALMGQTGHLSPMLSGQAAAAAAVAQFSLLTSPRQKAGLVQGSQFHPGNAP 193

Query: 1476 AQALQGMQNMGIISNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKL---PGQSLP 1306
             Q+L GMQ +G++  L+++ QLR  N               +  LT   +L     QS P
Sbjct: 194  GQSLSGMQAIGMMGPLNLSSQLRP-NGTLTYAQQRINQGQMRQQLTQQSQLTPSQAQSRP 252

Query: 1305 RAPSAAALNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            R  S A +N Q+S LTQNGQ  ++Q +LS QQQWLK +
Sbjct: 253  RTSSLAFMNPQLSSLTQNGQPGMLQNSLS-QQQWLKQM 289


>gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 [Morus notabilis]
          Length = 641

 Score =  194 bits (494), Expect = 1e-46
 Identities = 111/201 (55%), Positives = 135/201 (67%), Gaps = 4/201 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P++ G + QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD  G
Sbjct: 443  PRVHGPSGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 502

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDPEVEDLLL+IADDFIDSVT FACSLAKHRKSSTL++KD+LLHLEKNW LT+PG+  E
Sbjct: 503  KLDPEVEDLLLEIADDFIDSVTAFACSLAKHRKSSTLESKDLLLHLEKNWQLTIPGF--E 560

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSK--ATNKQLVNNSGSDHPINPSP 403
            ++K+    LSSD+HK+RL  ++   E+ Q E +    K   + + L N  G++H I PS 
Sbjct: 561  EQKHQNKLLSSDVHKKRLDLVRTLMESSQSEANTANRKEMISRQGLGNPVGTNHVIRPSL 620

Query: 402  SSEQLSLPVVASQTTHKPQRF 340
            SSEQL      SQ   +  RF
Sbjct: 621  SSEQLISQSTGSQMLQQMTRF 641



 Score =  105 bits (261), Expect = 1e-19
 Identities = 67/148 (45%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLPTQTTQHFNLQSQMLTQPRQKG-LVQAGQFNPGNSSAQALQGMQNM 1447
            RS +I Q+  LP+L +     FNLQ+Q+LT PR K  LVQ  QF+PGNS+ Q LQGMQ M
Sbjct: 196  RSALIGQSGHLPVLSSAAAVQFNLQNQLLTSPRHKAALVQGSQFHPGNSAGQTLQGMQAM 255

Query: 1446 GII---SNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNS 1276
            G++   S +  N  L +Y                Q  L S Q    QSLPR  S A LN 
Sbjct: 256  GMLGLSSQIRSNGALASYAQQRINQGQLRQQLSQQNALNSSQV---QSLPRTSSLAYLNP 312

Query: 1275 QVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            Q+SGL+QNGQ  ++Q +LS  QQWLK +
Sbjct: 313  QLSGLSQNGQPAMMQNSLS--QQWLKQM 338


>ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258141 [Solanum
            lycopersicum]
          Length = 642

 Score =  194 bits (492), Expect = 2e-46
 Identities = 112/200 (56%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P+++  A QK LSLTGSQ +A                EA+NQLLGKRKI DLV QVD  G
Sbjct: 446  PRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDAQG 505

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDPEVEDLLL+IADDFIDSVTTFAC+LAKHRKSSTL++KDVLLHLEKNW+LT+PG+S E
Sbjct: 506  KLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSE 565

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGS-KATNKQLVNNSGSDHPINPSPS 400
            +RK      SSD+HK+RL  I+   ET Q E     S K T + +  +  S+H I P PS
Sbjct: 566  ERKQYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSAKETVRPVAGD--SNHMIRP-PS 622

Query: 399  SEQLSLPVVASQTTHKPQRF 340
            S+ +     ASQ  H+  RF
Sbjct: 623  SDNMVSQSNASQMLHEMTRF 642



 Score = 97.1 bits (240), Expect = 3e-17
 Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 12/154 (7%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLPTQTTQ------HFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQAL 1465
            R+ ++ Q   LPML  Q          FNLQSQ L  PRQK GL+Q  QF+ GNS  Q+L
Sbjct: 227  RAALMGQTGHLPMLSGQAAAAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSL 286

Query: 1464 QGMQNMGIISNLSMNPQLRA-----YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRA 1300
            Q M   G++ +L+M+ QLRA     Y                Q  LT+ QK+  QSLPR 
Sbjct: 287  QAM---GMMGSLNMSSQLRANGALAYAQRVNQGQLRQQQLSQQNPLTTTQKISAQSLPRT 343

Query: 1299 PSAAALNSQVSGLTQNGQSTIVQTTLSQQQQWLK 1198
              A   NSQ+ GLTQNGQS I+Q   S QQQWLK
Sbjct: 344  SFA---NSQLPGLTQNGQSAIMQNN-SSQQQWLK 373


>ref|XP_002521336.1| protein with unknown function [Ricinus communis]
           gi|223539414|gb|EEF41004.1| protein with unknown
           function [Ricinus communis]
          Length = 523

 Score =  194 bits (492), Expect = 2e-46
 Identities = 108/199 (54%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
 Frame = -3

Query: 930 PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
           P + G   QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD  G
Sbjct: 325 PMMQGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 384

Query: 756 KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
           K+DPEVE+LLL+IADDFID+VT FACSLAKHRKSSTL++KD+LLHLEKNW+LT+PG+S E
Sbjct: 385 KVDPEVEELLLEIADDFIDNVTMFACSLAKHRKSSTLESKDLLLHLEKNWHLTIPGFSTE 444

Query: 576 DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPINPSPSS 397
           +R   + PLSSD+HK+RL  I+   E    E +    +   + L N   ++H I  SPSS
Sbjct: 445 ERNLQRKPLSSDLHKKRLDMIRALREPSHSETNNNPREMIRQGLGNPVVTNHLIRSSPSS 504

Query: 396 EQLSLPVVASQTTHKPQRF 340
           EQL     +SQ   +  RF
Sbjct: 505 EQLVSQSTSSQMLQQITRF 523



 Score = 84.0 bits (206), Expect = 3e-13
 Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLP---TQTTQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGM 1456
            RS ++ Q+  LPML             Q  +L  PRQK GLVQ  QF+PG+S  Q LQGM
Sbjct: 72   RSALLGQSGHLPMLTGAGAVAAAAAAAQLNLLASPRQKAGLVQGTQFHPGSSPGQPLQGM 131

Query: 1455 QNMGIISNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLP---RAPSAAA 1285
            Q MG++ +L++  QLR  N               +  L     L    +P   R  S A 
Sbjct: 132  QAMGMMGSLNLTSQLRP-NGPLTFAQQRLNAGQMRQQLAQQNPLTSSQVPNLSRTSSLAF 190

Query: 1284 LNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            +N Q+SGLTQN Q +++Q +L  QQQWLK +
Sbjct: 191  MNPQLSGLTQNAQPSMMQNSL-PQQQWLKQM 220


>ref|NP_001275310.1| transcription initiation factor TFIID subunit 12b-like [Solanum
            tuberosum] gi|77403675|dbj|BAE46416.1| TATA binding
            protein associated factor [Solanum tuberosum]
          Length = 638

 Score =  193 bits (491), Expect = 2e-46
 Identities = 111/199 (55%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P+++  A QK LSLTGSQ +A                EA+NQLLGKRKI DLV QVD  G
Sbjct: 442  PRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDAQG 501

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDPEVEDLLL+IADDFIDSVTTFAC+LAKHRKSSTL++KDVLLHLEKNW+LT+PG+S E
Sbjct: 502  KLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSE 561

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNSGSDHPINPSPSS 397
            +RK+     SSD+HK+RL  I+   ET Q E  +  S A          S+H I P PSS
Sbjct: 562  ERKHYPENSSSDLHKKRLDVIRTLMETSQTE-TSTNSSAKETVRPGAGESNHMIRP-PSS 619

Query: 396  EQLSLPVVASQTTHKPQRF 340
            + +     ASQ  H+  RF
Sbjct: 620  DNMVSQSNASQMLHEMTRF 638



 Score = 97.8 bits (242), Expect = 2e-17
 Identities = 69/154 (44%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLPTQTT------QHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQAL 1465
            R+ ++ Q   LPML  Q          FNLQSQ L  PRQK GL+Q  QF+ GNS  Q+L
Sbjct: 223  RAALMGQTGHLPMLSGQAAVAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSL 282

Query: 1464 QGMQNMGIISNLSMNPQLRA-----YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRA 1300
            Q M   G++ +L+M+ QLRA     Y                Q +LT+ QK+  QSLPR 
Sbjct: 283  QAM---GMMGSLNMSSQLRANGALAYAQRVNQSQLRQQQLSQQNSLTTTQKISAQSLPRT 339

Query: 1299 PSAAALNSQVSGLTQNGQSTIVQTTLSQQQQWLK 1198
              A   NSQ+ GLTQNGQS I+Q   S QQQWLK
Sbjct: 340  SFA---NSQLPGLTQNGQSAIMQNN-SSQQQWLK 369


>ref|XP_006465927.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
           [Citrus sinensis]
          Length = 593

 Score =  191 bits (485), Expect = 1e-45
 Identities = 107/187 (57%), Positives = 130/187 (69%), Gaps = 3/187 (1%)
 Frame = -3

Query: 930 PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
           P++SG A QK LSLTGSQ +A A              EATNQLLGKRKI DLV QVD  G
Sbjct: 395 PRISGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 454

Query: 756 KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
           K+DPEVEDLLL+IADDFIDSVT+FAC+LAKHRKSSTL++KD+LLHLEKNW+LTVPG+S E
Sbjct: 455 KVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHLTVPGFSSE 514

Query: 576 DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
           +R + +  LSSD+H +RL  I+   E  Q E      +   +Q L N  G +  +  S S
Sbjct: 515 ERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMIRQGLGNPVGVNTHMKSSAS 574

Query: 399 SEQLSLP 379
           SEQL +P
Sbjct: 575 SEQLLMP 581



 Score = 90.5 bits (223), Expect = 3e-15
 Identities = 69/153 (45%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
 Frame = -3

Query: 1623 RSGIITQAAQLP-MLPTQTTQ---HFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQG 1459
            RSG+I Q   LP ML  Q +     FNLQS ++  PRQK G+V   QF+PGNS  Q+L G
Sbjct: 148  RSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPG 207

Query: 1458 MQNMGII---SNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAA 1288
            MQ MGI+   S+L  NP    Y                Q  LTSPQ    Q+L R  S+ 
Sbjct: 208  MQAMGILNLSSHLRANP---LYAQQRMNQGQIRQQLSQQNPLTSPQI---QNLSRTSSSL 261

Query: 1287 A-LNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            A +N Q+SGL QNGQ  ++Q +LS QQQWLK +
Sbjct: 262  AFMNPQLSGLAQNGQPGMMQNSLS-QQQWLKQM 293


>sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation factor TFIID subunit 12b;
            AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
            AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
            AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
            gi|169218920|gb|ACA50283.1| cytokinin hypersensitive 1
            [Arabidopsis thaliana]
          Length = 681

 Score =  191 bits (485), Expect = 1e-45
 Identities = 105/184 (57%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAP--AXXXXXXXXXXXTEATNQLLGKRKIHDLVMQVDPHG 757
            P++   A QK +SLTGSQ EA               TEATNQLLGKRKI DLV QVD H 
Sbjct: 483  PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHA 542

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDP+VEDLLL++ADDFIDSVT+FACSLAKHRKSS L+ KD+LLHLEKN +LT+PG+S E
Sbjct: 543  KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 602

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            D++  KT + +D+HK+RL  ++   E+ + E +A  SK T +Q +VN +G +H + PS S
Sbjct: 603  DKRQTKT-VPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQS 661

Query: 399  SEQL 388
            SEQL
Sbjct: 662  SEQL 665



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 72/189 (38%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXGRSGIITQAAQLPMLPTQT-TQH 1561
            +RQ AG+YG  +NF                        R+ ++ Q+  LPML        
Sbjct: 198  LRQQAGLYG-TMNFGGSGSVQQSQQNQQMVNPNMS---RAALVGQSGHLPMLNGAAGAAQ 253

Query: 1560 FNLQSQMLT-QPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA----YN 1399
             N+Q Q+L   PRQK G+VQ  QF+PG SS Q LQGMQ MG++ +L++  Q+R     Y 
Sbjct: 254  MNIQPQLLAASPRQKSGMVQGSQFHPG-SSGQQLQGMQAMGMMGSLNLTSQMRGNPALYA 312

Query: 1398 XXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTTLS 1219
                           Q  LTSPQ    Q+L R  S A +N Q+SGL QNGQ+ ++Q +LS
Sbjct: 313  QQRINPGQMRQQLSQQNALTSPQV---QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLS 369

Query: 1218 QQQQWLKHL 1192
             QQQWLK +
Sbjct: 370  -QQQWLKQM 377


>ref|NP_564023.1| transcription initiation factor TFIID subunit 12B [Arabidopsis
            thaliana] gi|30685323|ref|NP_849680.1| transcription
            initiation factor TFIID subunit 12B [Arabidopsis
            thaliana] gi|75249490|sp|Q940A7.1|TA12B_ARATH RecName:
            Full=Transcription initiation factor TFIID subunit 12b;
            AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
            AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
            AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
            gi|15810159|gb|AAL07223.1| unknown protein [Arabidopsis
            thaliana] gi|20259253|gb|AAM14362.1| unknown protein
            [Arabidopsis thaliana] gi|39545906|gb|AAR28016.1| TAF12b
            [Arabidopsis thaliana] gi|332191466|gb|AEE29587.1|
            transcription initiation factor TFIID subunit A
            [Arabidopsis thaliana] gi|332191467|gb|AEE29588.1|
            transcription initiation factor TFIID subunit A
            [Arabidopsis thaliana]
          Length = 683

 Score =  191 bits (485), Expect = 1e-45
 Identities = 105/184 (57%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAP--AXXXXXXXXXXXTEATNQLLGKRKIHDLVMQVDPHG 757
            P++   A QK +SLTGSQ EA               TEATNQLLGKRKI DLV QVD H 
Sbjct: 485  PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHA 544

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDP+VEDLLL++ADDFIDSVT+FACSLAKHRKSS L+ KD+LLHLEKN +LT+PG+S E
Sbjct: 545  KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 604

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            D++  KT + +D+HK+RL  ++   E+ + E +A  SK T +Q +VN +G +H + PS S
Sbjct: 605  DKRQTKT-VPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQS 663

Query: 399  SEQL 388
            SEQL
Sbjct: 664  SEQL 667



 Score = 93.6 bits (231), Expect = 3e-16
 Identities = 73/189 (38%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXGRSGIITQAAQLPMLPTQT-TQH 1561
            +RQ AG+YG  +NF                        R+G++ Q+  LPML        
Sbjct: 197  LRQQAGLYG-TMNFGGSGSVQQSQQNQQMVNPNMS---RAGLVGQSGHLPMLNGAAGAAQ 252

Query: 1560 FNLQSQMLT-QPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA----YN 1399
             N+Q Q+L   PRQK G+VQ  QF+PG SS Q LQGMQ MG++ +L++  Q+R     Y 
Sbjct: 253  MNIQPQLLAASPRQKSGMVQGSQFHPG-SSGQQLQGMQAMGMMGSLNLTSQMRGNPALYA 311

Query: 1398 XXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTTLS 1219
                           Q  LTSPQ    Q+L R  S A +N Q+SGL QNGQ+ ++Q +LS
Sbjct: 312  QQRINPGQMRQQLSQQNALTSPQV---QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLS 368

Query: 1218 QQQQWLKHL 1192
             QQQWLK +
Sbjct: 369  -QQQWLKQM 376


>ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arabidopsis lyrata subsp.
            lyrata] gi|297338793|gb|EFH69210.1| hypothetical protein
            ARALYDRAFT_471949 [Arabidopsis lyrata subsp. lyrata]
          Length = 670

 Score =  190 bits (483), Expect = 2e-45
 Identities = 102/184 (55%), Positives = 135/184 (73%), Gaps = 3/184 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAP--AXXXXXXXXXXXTEATNQLLGKRKIHDLVMQVDPHG 757
            P++S  A QK +SLTGSQ +A               T+ATNQLLGKRKI DLV QVD H 
Sbjct: 472  PRMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTDATNQLLGKRKIQDLVSQVDVHA 531

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDP+VEDLLL++ADDFIDSVT+FACSLAKHRKSS L+ KD+LLHLEKN +LT+PG+S +
Sbjct: 532  KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSD 591

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            +++  KT + +D+HK+RL  ++   E+ + E +A  SK T +Q +VN +G +H + PSPS
Sbjct: 592  NKRQTKT-VPTDLHKKRLAMVRALLESSKAETNASNSKETIRQVMVNPNGPNHLLRPSPS 650

Query: 399  SEQL 388
            S+QL
Sbjct: 651  SDQL 654



 Score = 92.4 bits (228), Expect = 7e-16
 Identities = 73/189 (38%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXGRSGIITQAAQLPMLPTQT-TQH 1561
            +RQ AG+YG  +NF                        R+ ++ Q+  LPML     +  
Sbjct: 188  LRQQAGLYG-TMNFGGSGSVQQSQQNQQMVNPNMS---RAALVGQSGHLPMLNGAAGSAQ 243

Query: 1560 FNLQSQMLT-QPRQK-GLVQAGQFNPGNSSAQALQGMQNMGIISNLSMNPQLRA----YN 1399
             N+Q Q+L   PRQK GLVQ  QF+PG SS Q LQGMQ MG++ +L++  Q+R     Y 
Sbjct: 244  MNIQPQLLAASPRQKSGLVQGSQFHPG-SSGQQLQGMQAMGMMGSLNLTSQMRGNPALYA 302

Query: 1398 XXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTTLS 1219
                           Q  LTSPQ    Q+L R  S A +N Q+SGL QNGQ+ ++Q +LS
Sbjct: 303  QQRINPGQMRQQLSQQNALTSPQV---QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLS 359

Query: 1218 QQQQWLKHL 1192
             QQQWLK +
Sbjct: 360  -QQQWLKQM 367


>ref|XP_006426645.1| hypothetical protein CICLE_v10025234mg [Citrus clementina]
           gi|557528635|gb|ESR39885.1| hypothetical protein
           CICLE_v10025234mg [Citrus clementina]
          Length = 587

 Score =  189 bits (481), Expect = 3e-45
 Identities = 106/187 (56%), Positives = 129/187 (68%), Gaps = 3/187 (1%)
 Frame = -3

Query: 930 PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
           P++SG A QK LSLTGSQ +A                EATNQLLGKRKI DLV QVD  G
Sbjct: 389 PRISGPAGQKSLSLTGSQPDATVSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 448

Query: 756 KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
           K+DPEVEDLLL+IADDFIDSVT+FAC+LAKHRKSSTL++KD+LLHLEKNW+LTVPG+S E
Sbjct: 449 KVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHLTVPGFSSE 508

Query: 576 DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
           +R + +  LSSD+H +RL  I+   E  Q E      +   +Q L N  G +  +  S S
Sbjct: 509 ERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMIRQGLGNPVGVNTHMKSSAS 568

Query: 399 SEQLSLP 379
           SEQL +P
Sbjct: 569 SEQLLMP 575



 Score = 90.5 bits (223), Expect = 3e-15
 Identities = 69/153 (45%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
 Frame = -3

Query: 1623 RSGIITQAAQLP-MLPTQTTQ---HFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQG 1459
            RSG+I Q   LP ML  Q +     FNLQS ++  PRQK G+V   QF+PGNS  Q+L G
Sbjct: 148  RSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPG 207

Query: 1458 MQNMGII---SNLSMNPQLRAYNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAA 1288
            MQ MGI+   S+L  NP    Y                Q  LTSPQ    Q+L R  S+ 
Sbjct: 208  MQAMGILNLSSHLRANP---LYAQQRMNQGQIRQQLSQQNPLTSPQI---QNLSRTSSSL 261

Query: 1287 A-LNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            A +N Q+SGL QNGQ  ++Q +LS QQQWLK +
Sbjct: 262  AFMNPQLSGLAQNGQPGMMQNSLS-QQQWLKQM 293


>ref|XP_006416703.1| hypothetical protein EUTSA_v10006997mg [Eutrema salsugineum]
            gi|557094474|gb|ESQ35056.1| hypothetical protein
            EUTSA_v10006997mg [Eutrema salsugineum]
          Length = 668

 Score =  189 bits (480), Expect = 4e-45
 Identities = 105/184 (57%), Positives = 132/184 (71%), Gaps = 3/184 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAP--AXXXXXXXXXXXTEATNQLLGKRKIHDLVMQVDPHG 757
            P++S  A QK +SLTGSQ +A               TEATNQLLGKRKI DLV QVD H 
Sbjct: 470  PRMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHA 529

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KLDP+VEDLLL++ADDFIDSVT+FACSLAKHRKSS L+ KD+LLHLEKN +LT+PG+S E
Sbjct: 530  KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSILEPKDILLHLEKNLHLTIPGFSSE 589

Query: 576  DRKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQ-LVNNSGSDHPINPSPS 400
            D+   K  + +D+HK+RL  ++   E+ + E +A  SK T +Q +VN +G  H + PSPS
Sbjct: 590  DKLQTKN-VPTDLHKKRLALLRALLESSKPETNATNSKETIRQGMVNPNGPTHLLRPSPS 648

Query: 399  SEQL 388
            SEQL
Sbjct: 649  SEQL 652



 Score = 82.0 bits (201), Expect = 1e-12
 Identities = 72/188 (38%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
 Frame = -3

Query: 1737 MRQHAGMYGGQVNFXXXXXXXXXXXXXXXXXXXXXXXGRSGIITQAAQLPMLPTQT-TQH 1561
            +RQ AG+YG  +NF                        R+ ++ Q+  LPML        
Sbjct: 200  LRQQAGLYG-TMNFGGSGSVQQSQQMGNPNMS------RAALVGQSGHLPMLNGAAGAAQ 252

Query: 1560 FNLQSQMLT-QPRQK-GLVQAGQFNPGNSSAQALQGMQNMGII---SNLSMNPQLRAYNX 1396
             N+Q Q+L   PRQK GLVQ  QF+ G SS Q LQGMQ MG++   S +  NP L  Y  
Sbjct: 253  MNIQPQLLAASPRQKTGLVQGSQFHQG-SSGQQLQGMQAMGMMNLTSQMRGNPAL--YAQ 309

Query: 1395 XXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAALNSQVSGLTQNGQSTIVQTTLSQ 1216
                          Q  LTSPQ    Q+L R  S A +N Q+SGL QNGQS ++Q +L+ 
Sbjct: 310  QRINPGQMRQQLSQQNALTSPQV---QNLQRTSSLAFMNPQLSGLAQNGQSGMMQNSLT- 365

Query: 1215 QQQWLKHL 1192
             QQWLK +
Sbjct: 366  HQQWLKQM 373


>ref|XP_006846365.1| hypothetical protein AMTR_s00012p00261940 [Amborella trichopoda]
           gi|548849135|gb|ERN08040.1| hypothetical protein
           AMTR_s00012p00261940 [Amborella trichopoda]
          Length = 371

 Score =  187 bits (476), Expect = 1e-44
 Identities = 100/200 (50%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
 Frame = -3

Query: 930 PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT-EATNQLLGKRKIHDLVMQVDPHGK 754
           P+++G ++QKP SLTGSQ   PA             EA+NQ+LGKR+I DLV QVDP GK
Sbjct: 173 PRMAGCSIQKPTSLTGSQPSTPASGTTTGGSSSQGTEASNQVLGKRRIQDLVSQVDPQGK 232

Query: 753 LDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRED 574
           LDPEVED+LL+IADDFIDSVTT+ACSLAKHRKSSTL++KD+LLHLE+NW+L +PG+S E+
Sbjct: 233 LDPEVEDILLEIADDFIDSVTTYACSLAKHRKSSTLESKDLLLHLERNWHLNIPGFSSEE 292

Query: 573 RKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSK-ATNKQLVNN-SGSDHPINPSPS 400
           ++  + P+++D H++RL  I+   ++   +   G  + +  +Q VNN     H IN +  
Sbjct: 293 QRNHRKPIANDAHRKRLEVIRNLMDSQSPDTAVGKDRDSMGQQAVNNLEVLAHQIN-AVQ 351

Query: 399 SEQLSLPVVASQTTHKPQRF 340
           SEQ+  P    Q   K  RF
Sbjct: 352 SEQMFSPAAGPQMVQKLTRF 371


>ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227692 [Cucumis sativus]
          Length = 668

 Score =  187 bits (476), Expect = 1e-44
 Identities = 108/201 (53%), Positives = 132/201 (65%), Gaps = 4/201 (1%)
 Frame = -3

Query: 930  PKLSGSAVQKPLSLTGSQEEAPAXXXXXXXXXXXT--EATNQLLGKRKIHDLVMQVDPHG 757
            P+++G A QK LSLTGS  +A A              EA  Q+LGKRKI DLV QVDPHG
Sbjct: 468  PRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHG 527

Query: 756  KLDPEVEDLLLQIADDFIDSVTTFACSLAKHRKSSTLDTKDVLLHLEKNWNLTVPGYSRE 577
            KL+PEVEDLLL+IADDFIDSVTTF+C+LAKHRKSSTL++KD+LLHLEKNW L VPGYS +
Sbjct: 528  KLEPEVEDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSD 587

Query: 576  D-RKYLKTPLSSDIHKRRLIAIQESAETHQLEGDAGGSKATNKQLVNNS-GSDHPINPSP 403
            + + + K   SSD+HK+RL  I+   E   +E +    K   +Q V  S G +    PSP
Sbjct: 588  EWKNHNKNLSSSDVHKKRLDMIRILKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSP 647

Query: 402  SSEQLSLPVVASQTTHKPQRF 340
            SSEQL      SQ   +  RF
Sbjct: 648  SSEQLLSQTAGSQLLQQMMRF 668



 Score = 94.0 bits (232), Expect = 3e-16
 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
 Frame = -3

Query: 1623 RSGIITQAAQLPMLPTQTTQHFNLQSQMLTQPRQK-GLVQAGQFNPGNSSAQALQGMQNM 1447
            RS +I Q   LPML       +NL SQ+L   +QK GLVQ  QF   NS  QALQG+Q M
Sbjct: 212  RSTLIGQGNHLPML--SGAAQYNLPSQLLASSKQKAGLVQGPQFQSSNSHGQALQGIQAM 269

Query: 1446 GIISNLSMNPQLRA------YNXXXXXXXXXXXXXXXQMTLTSPQKLPGQSLPRAPSAAA 1285
            G++ ++++  QLRA      Y                Q +LTSPQ    Q+LPR  + A 
Sbjct: 270  GMMGSMNLPSQLRANGLASPYAQQRINQGQIRQQLSQQSSLTSPQV---QNLPRMSNLAF 326

Query: 1284 LNSQVSGLTQNGQSTIVQTTLSQQQQWLKHL 1192
            +N Q++ L QNGQ T++Q +L QQQQWLK +
Sbjct: 327  MNQQLTNLAQNGQPTMMQNSL-QQQQWLKQM 356