BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00005113
         (1761 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573836.1| PREDICTED: transcription initiation factor I...   471   e-130
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              467   e-129
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   463   e-127
gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indi...   462   e-127
gb|AAX95773.1| putative transcription initiation factor [Oryza s...   462   e-127
gb|AAN04997.1| putative transcription initiation factor [Oryza s...   462   e-127
ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group] g...   461   e-127
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   457   e-126
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   457   e-126
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   456   e-125
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   454   e-125
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   453   e-124
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   452   e-124
ref|XP_004983299.1| PREDICTED: transcription initiation factor I...   452   e-124
ref|XP_004983298.1| PREDICTED: transcription initiation factor I...   452   e-124
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera...   448   e-123
ref|NP_001148823.1| LOC100282440 [Zea mays] gi|195622396|gb|ACG3...   443   e-121
gb|ACN31587.1| unknown [Zea mays]                                     441   e-121
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus...   441   e-121
gb|ACL54486.1| unknown [Zea mays]                                     441   e-121

>ref|XP_003573836.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Brachypodium distachyon]
          Length = 530

 Score =  471 bits (1212), Expect = e-130
 Identities = 275/520 (52%), Positives = 313/520 (60%), Gaps = 6/520 (1%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLKP C GCGS SDLYG+GCKHTTLC SCGKSMA +R RC  C A IT LIREYNV
Sbjct: 3    SVDLVLKPACEGCGSPSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSAPITNLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+ASTDKAF IGR+V+GLPPFSK  +AEN+WSLHKEGLQGRQLTD ++EKY  KPWILE
Sbjct: 63   RANASTDKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMQEKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+QFQG +EGSQS+TATY+LLMMQGKEF AFPAGSWYNF+K+AQYKQLTLEEAEEK
Sbjct: 123  DETGQYQFQGHMEGSQSATATYYLLMMQGKEFHAFPAGSWYNFSKVAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E S + KKGK N       
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDIKKLEPTNDGEKE-SARPKKGKDNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARK+RLGL+                             EHEETFTDDDEA
Sbjct: 242  KGEENEEDEAARKDRLGLS-KRGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRASGQNESDADEDD 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                       SPVLAPKQ D PKDEPV ++P++ TP                       
Sbjct: 361  EDDDDDE---SSPVLAPKQNDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKSGGD 417

Query: 290  DEKXXXXXXSVPAKKVKLE----NSIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAAV 123
            D K      S  +KK K+E     S +K+E                 A   S   + + V
Sbjct: 418  DAK---TSGSAASKKAKVEPDTKTSSIKEE-------APSSLKHTSKASASSRNANVSPV 467

Query: 122  TEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            TE+EIR V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 468  TEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 507


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  467 bits (1201), Expect = e-129
 Identities = 270/531 (50%), Positives = 316/531 (59%), Gaps = 16/531 (3%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL+LKP CSGCGS +DLYGS CKH TLCLSCGK+MA N G+C  CG  +T+LIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VR ++S DK ++IGR+V+GLP FS K +A+N+WSLHKEGLQGRQ++D LREKYKNKPW+L
Sbjct: 61   VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEE 1011
            EDETGQ+Q+ GQLEGSQS  ATY+LLMMQGKEF+A PAGSWYNF K+AQYKQLTLEEAEE
Sbjct: 121  EDETGQYQYHGQLEGSQS--ATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEE 178

Query: 1010 KMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKS--NXXXXX 837
            KM  RR  A GY+RWMMKAA NG AAFGE++K +      A G  + +K ++        
Sbjct: 179  KMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNV 238

Query: 836  XXXXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDD 657
                         RKNRLGLN                             EHEE FTDDD
Sbjct: 239  SDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 298

Query: 656  EAVGNDPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXX 486
            EAVGNDPEEREDLAPE+PAPPEIKQ           +                   +N  
Sbjct: 299  EAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDS 358

Query: 485  XXXXXXXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTP-------SRATPPPVXXXXXXXX 327
                        EI +SPVLAPKQKD PK+EP  ++P       +R+TPP          
Sbjct: 359  DAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPP--------TS 410

Query: 326  XXXXXXXXXXXSDEKXXXXXXSVPAKKVKLEN---SIVKDEXXXXXXXXXXXXXXXXTAR 156
                        D K        P KKVK EN   S  KDE                ++ 
Sbjct: 411  KSSKGKRKSNGDDMKTTNGG---PPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSV 467

Query: 155  PGSSTPSTAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
               ST S   VTE+EIRAV+    PVTTQDLVAKFK+RLK+ EDKK FADI
Sbjct: 468  KTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADI 518


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  463 bits (1191), Expect = e-127
 Identities = 267/524 (50%), Positives = 314/524 (59%), Gaps = 9/524 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL L+P CSGCGS +DLYGS CKH TLCL+CGK+MA NRG+C  CGA +T+LIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VRAS S++K ++IGR+V+GLP FS K +AEN+WSL KEG+ GRQ+TDTLREK+KNKPW+L
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSW--YNFTKIAQYKQLTLEEA 1017
            EDETGQFQ+QG LEGSQS  ATY+LLMM GKEF+A PAGSW  YNF K+A YKQLTLEEA
Sbjct: 121  EDETGQFQYQGHLEGSQS--ATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEA 178

Query: 1016 EEKMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXX 837
            EEKM  RR  A GYERWMMKAA NGAAAFGE++K +      A G    KK   +     
Sbjct: 179  EEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGN 238

Query: 836  XXXXXXXXXXXEA-RKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDD 660
                       EA RK+RLGLN                             EHEE FTDD
Sbjct: 239  VSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDD 298

Query: 659  DEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLN-XXX 483
            DEAV  DPEEREDLAPE+PAPPEIKQ        +                         
Sbjct: 299  DEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNES 358

Query: 482  XXXXXXXXXXXEIVMSPVLAPKQKD-TPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXX 306
                       +  +SPVLAPKQKD  PK+EP  ++P++ TPP                 
Sbjct: 359  DAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 305  XXXXSDEKXXXXXXSVPAKKVKLENSI---VKDEXXXXXXXXXXXXXXXXTARPGSSTPS 135
                 D K        P KKVK EN +   VK+E                +++ G ++  
Sbjct: 419  KLNADDAK---TSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGP 475

Query: 134  TAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            T  VTEEEIRAV+   GPVTTQDLVA+FKSRL+ PEDKK FADI
Sbjct: 476  TGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADI 519


>gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indica Group]
          Length = 532

 Score =  462 bits (1189), Expect = e-127
 Identities = 274/532 (51%), Positives = 314/532 (59%), Gaps = 18/532 (3%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCGS SDLYG+ CKHTTLC SCGKSMA +  RC  C A IT LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A+TDK+F IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQSSTATY+LLMM GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E + + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDIKKLEPTNGTEKENA-RPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRL LN                             EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDD 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   E   SPVLAPKQKD PKDEPV ++P++ TP                       
Sbjct: 361  EDDDQEDE--SSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGD 418

Query: 290  DEKXXXXXXSVPAKKVKLEN----SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAA- 126
            D K         +KK K+E+    S+ KDE                   P SS P++ A 
Sbjct: 419  DSK---ASGGAASKKAKVESDTKTSVAKDE------------------TPSSSKPASKAT 457

Query: 125  -----------VTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                       VTE+EIR V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 458  AASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 509


>gb|AAX95773.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|78708004|gb|ABB46979.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 531

 Score =  462 bits (1188), Expect = e-127
 Identities = 273/532 (51%), Positives = 313/532 (58%), Gaps = 18/532 (3%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCGS SDLYG+ CKHTTLC SCGKSMA +  RC  C A IT LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A+TDK+F IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQSSTATY+LLMM GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E + + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENA-RPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRL LN                             EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDD 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                       SPVLAPKQKD PKDEPV ++P++ TP                       
Sbjct: 361  EDDDEDE---SSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGD 417

Query: 290  DEKXXXXXXSVPAKKVKLEN----SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAA- 126
            D K         +KK K+E+    S+ KDE                   P SS P++ A 
Sbjct: 418  DSK---ASGGAASKKAKVESDTKPSVAKDE------------------TPSSSKPASKAT 456

Query: 125  -----------VTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                       VTE+EIR V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 457  AASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 508


>gb|AAN04997.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|31430629|gb|AAP52517.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 532

 Score =  462 bits (1188), Expect = e-127
 Identities = 274/532 (51%), Positives = 314/532 (59%), Gaps = 18/532 (3%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCGS SDLYG+ CKHTTLC SCGKSMA +  RC  C A IT LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A+TDK+F IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQSSTATY+LLMM GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E + + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENA-RPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRL LN                             EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDD 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   E   SPVLAPKQKD PKDEPV ++P++ TP                       
Sbjct: 361  EDDDQEDE--SSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGD 418

Query: 290  DEKXXXXXXSVPAKKVKLEN----SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAA- 126
            D K         +KK K+E+    S+ KDE                   P SS P++ A 
Sbjct: 419  DSK---ASGGAASKKAKVESDTKPSVAKDE------------------TPSSSKPASKAT 457

Query: 125  -----------VTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                       VTE+EIR V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 458  AASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 509


>ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group] gi|62733662|gb|AAX95774.1|
            putative transcription initiation factor [Oryza sativa
            Japonica Group] gi|78708005|gb|ABB46980.1| mutant
            TFIIF-alpha, putative, expressed [Oryza sativa Japonica
            Group] gi|113638875|dbj|BAF26180.1| Os10g0188100 [Oryza
            sativa Japonica Group] gi|215713568|dbj|BAG94705.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|215769198|dbj|BAH01427.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 529

 Score =  461 bits (1187), Expect = e-127
 Identities = 274/528 (51%), Positives = 311/528 (58%), Gaps = 14/528 (2%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCGS SDLYG+ CKHTTLC SCGKSMA +  RC  C A IT LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A+TDK+F IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQSSTATY+LLMM GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E + + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENA-RPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRL LN                             EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDD 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   E   SPVLAPKQKD PKDEPV ++P++ TP                       
Sbjct: 361  EDDDQEDE--SSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGD 418

Query: 290  DEKXXXXXXSVPAKKVKLENSIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAA----- 126
            D K      S  AK  K   S+ KDE                   P SS P++ A     
Sbjct: 419  DSKASGGAASKKAKDTK--PSVAKDE------------------TPSSSKPASKATAASK 458

Query: 125  -------VTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                   VTE+EIR V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 459  TSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 506


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  457 bits (1176), Expect = e-126
 Identities = 265/526 (50%), Positives = 311/526 (59%), Gaps = 16/526 (3%)
 Frame = -2

Query: 1532 VLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNVRASA 1353
            +LKP CSGCGS +DLYGS CKH TLCLSCGK+MA N G+C  CG  +T+LIREYNVR ++
Sbjct: 1    MLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNS 60

Query: 1352 STDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILEDETG 1176
            S DK ++IGR+V+GLP FSK  +A+N+WSLHKEGLQGRQ++D LREKYKNKPW+LEDETG
Sbjct: 61   SGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETG 120

Query: 1175 QFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEKMNKR 996
            Q+Q+ GQLEGSQS  ATY+LLMMQGKEF+A PAGSWYNF K+AQYKQLTLEEAEEKM  R
Sbjct: 121  QYQYHGQLEGSQS--ATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 178

Query: 995  RHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKS--NXXXXXXXXXX 822
            R  A GY+RWMMKAA NG AAFGE++K +      A G  + +K ++             
Sbjct: 179  RRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAE 238

Query: 821  XXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEAVGN 642
                    RKNRLGLN                             EHEE FTDDDEAVGN
Sbjct: 239  EDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGN 298

Query: 641  DPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            DPEEREDLAPE+PAPPEIKQ           +                   +N       
Sbjct: 299  DPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDD 358

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTP-------SRATPPPVXXXXXXXXXXXXX 312
                   EI +SPVLAPKQKD PK+EP  ++P       +R+TPP               
Sbjct: 359  DDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPP--------TSKSSKG 410

Query: 311  XXXXXXSDEKXXXXXXSVPAKKVKLEN---SIVKDEXXXXXXXXXXXXXXXXTARPGSST 141
                   D K        P KKVK EN   S  KDE                ++    ST
Sbjct: 411  KRKSNGDDMKTTNGG---PPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGST 467

Query: 140  PSTAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
             S   VTE+EIRAV+    PVTTQDLVAKFK+RLK+ EDKK FADI
Sbjct: 468  SSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADI 513


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  457 bits (1175), Expect = e-126
 Identities = 265/524 (50%), Positives = 312/524 (59%), Gaps = 9/524 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL+LKP CSGCGS +DLYGS CKH TLCL+CGK+MA NRG+C  CG  +++LIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VRAS S+DK ++IGR+V+GLP FS K +AEN+WSLHKEG+ GRQ+TD LREK+KNKPW+L
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSW--YNFTKIAQYKQLTLEEA 1017
            EDETGQ Q+QG LEGSQS  ATY+LLMM GKEF+A PAGSW  YNF K+A YKQLTLEEA
Sbjct: 121  EDETGQSQYQGHLEGSQS--ATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEA 178

Query: 1016 EEKMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXX 837
            EEKM  RR  A GYERWMMKAA NGAAAFGE++K +      A G    +K   +     
Sbjct: 179  EEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGN 238

Query: 836  XXXXXXXXXXXEA-RKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDD 660
                       EA RK+RLGLN                             EHEE FTDD
Sbjct: 239  VSDRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDD 298

Query: 659  DEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLN-XXX 483
            DEAV  DPEEREDLAPE+PAPPEIKQ        +                         
Sbjct: 299  DEAVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGKANGLNES 358

Query: 482  XXXXXXXXXXXEIVMSPVLAPKQKD-TPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXX 306
                       +  +SPVLAPKQKD  PK+E    +P++ TP                  
Sbjct: 359  DVEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKR 418

Query: 305  XXXXSDEKXXXXXXSVPAKKVKLENSI---VKDEXXXXXXXXXXXXXXXXTARPGSSTPS 135
                 D K        P KKVK EN +   VK+E                +++ GS++ S
Sbjct: 419  KLNGEDAK---SSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGS 475

Query: 134  TAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            T  VTEEEIRAV+   GPVTTQDLVA+FKSRL+ PEDKK FADI
Sbjct: 476  TGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADI 519


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  456 bits (1173), Expect = e-125
 Identities = 259/518 (50%), Positives = 305/518 (58%), Gaps = 4/518 (0%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            + DL+LK  CSGCGS +DLYGS CKH TLCLSCGK+MA N  +C  CGA +++LIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RAS+S+DK ++IGR+V+GLP FS K +AEN+WSL KEGLQGRQLTD LREKYKN+PW+LE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQFQ+QG LEGSQS  ATY+LL++QGKEF+A PA SWYNF K+AQYKQLTLEEAEEK
Sbjct: 123  DETGQFQYQGHLEGSQS--ATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 180

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXXXXX 828
            M  RR  A GYERWMMKAA NG AAFGE++K +      A G  + K    +        
Sbjct: 181  MRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDR 240

Query: 827  XXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEAV 648
                     ARKNRLGLN                             EHEE FTDDDEAV
Sbjct: 241  GDEDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 647  GNDPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXX 477
            GND EEREDLAPE+PAPPEIKQ                                +     
Sbjct: 301  GNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAED 360

Query: 476  XXXXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXX 297
                     ++ +SPVLAPKQ  TPK+EP  ++P++   P                    
Sbjct: 361  DDDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAK---PMTSASSKGTPSTSKSAKGKR 415

Query: 296  XSDEKXXXXXXSVPAKKVKLENSIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAAVTE 117
              +          P KKVK EN + K                   A P + T ST+ VTE
Sbjct: 416  KLNSDEAKQTNVAPQKKVKTENEL-KPTVKEESAPTSKSSATPKAAPPSAKTGSTSPVTE 474

Query: 116  EEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            EEIRAV+   GPVTTQDLVA+FKSRLK+ EDKK FADI
Sbjct: 475  EEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADI 512


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  454 bits (1168), Expect = e-125
 Identities = 262/523 (50%), Positives = 309/523 (59%), Gaps = 8/523 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL+LKP CSGCGS +DLYGS CKH TLCL+CGK+MA N+ +C  CGA +T+LIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VR S S+DK ++IGR+VSGLP FS K +AEN+W+LHK+GLQGRQ+TDTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEE 1011
            EDETGQ Q+QG LEGSQS  ATY+LL+M  KEF+A PAGSWYNF K+AQYKQLTLEEAEE
Sbjct: 121  EDETGQAQYQGHLEGSQS--ATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEE 178

Query: 1010 KMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            KM  RR  A GYERWMMKAA NGAAAFGE++K +    A   G  ++KK           
Sbjct: 179  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSD 238

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                       RKNRLGLN                             EHEE FTDDDEA
Sbjct: 239  RGEEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEA 298

Query: 650  VGNDPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXX 480
            VGNDPEEREDLAPE+PAPPEIKQ                                +    
Sbjct: 299  VGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 479  XXXXXXXXXXEIVMSPVLAPKQKDTP-KDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXX 303
                      E+  SP+LAPK KDTP K+EP  ++P++  P                   
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 302  XXXSDEKXXXXXXSVPAKKVKLEN---SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPST 132
                D +        P KKVK EN   S  +DE                ++R G ST ++
Sbjct: 419  SNGDDAR---APSGAPLKKVKTENETKSSARDE-NVSASKSSAPAKGASSSRTG-STSAS 473

Query: 131  AAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
              VT EEIRAV+    PVTTQDLVAKFK RL++ ED+  FADI
Sbjct: 474  GPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADI 516


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  453 bits (1165), Expect = e-124
 Identities = 262/523 (50%), Positives = 308/523 (58%), Gaps = 8/523 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL+LKP CSGCGS  DLYGS CKH TLCL+CGK+MA N+ +C  CGA +T+LIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VR S S+DK ++IGR+VSGLP FS K +AEN+W+LHK+GLQGRQ+TDTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEE 1011
            EDETGQ Q+QG LEGSQS  ATY+LL+M  KEF+A PAGSWYNF K+AQYKQLTLEEAEE
Sbjct: 121  EDETGQAQYQGHLEGSQS--ATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEE 178

Query: 1010 KMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            KM  RR  A GYERWMMKAA NGAAAFGE++K +    A   G  ++KK           
Sbjct: 179  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSD 238

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                       RKNRLGLN                             EHEE FTDDDEA
Sbjct: 239  RGEEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEA 298

Query: 650  VGNDPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXX 480
            VGNDPEEREDLAPE+PAPPEIKQ                                +    
Sbjct: 299  VGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 479  XXXXXXXXXXEIVMSPVLAPKQKDTP-KDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXX 303
                      E+  SP+LAPK KDTP K+EP  ++P++  P                   
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 302  XXXSDEKXXXXXXSVPAKKVKLEN---SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPST 132
                D +        P KKVK EN   S  +DE                ++R G ST ++
Sbjct: 419  SNGDDAR---APSGAPLKKVKTENETKSSARDE-NVSASKSSAPAKGASSSRTG-STSAS 473

Query: 131  AAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
              VT EEIRAV+    PVTTQDLVAKFK RL++ ED+  FADI
Sbjct: 474  GPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADI 516


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  452 bits (1164), Expect = e-124
 Identities = 263/521 (50%), Positives = 309/521 (59%), Gaps = 6/521 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL L+P CSGCGS +DLYGS CKH TLCL+CGK+MA NRG+C  CGA +T+LIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VRAS S++K ++IGR+V+GLP FS K +AEN+WSL KEG+ GRQ+TDTLREK+KNKPW+L
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSW--YNFTKIAQYKQLTLEEA 1017
            EDETGQFQ+QG LEGSQS  ATY+LLMM GKEF+A PAGSW  YNF K+A YKQLTLEEA
Sbjct: 121  EDETGQFQYQGHLEGSQS--ATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEA 178

Query: 1016 EEKMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXX 837
            EEKM  RR  A GYERWMMKAA NGAAAFGE++K +      A G    KK   +     
Sbjct: 179  EEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGN 238

Query: 836  XXXXXXXXXXXEA-RKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDD 660
                       EA RK+RLGLN                             EHEE FTDD
Sbjct: 239  VSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDD 298

Query: 659  DEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLN-XXX 483
            DEAV  DPEEREDLAPE+PAPPEIKQ        +                         
Sbjct: 299  DEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNES 358

Query: 482  XXXXXXXXXXXEIVMSPVLAPKQKD-TPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXX 306
                       +  +SPVLAPKQKD  PK+EP  ++P++ TPP                 
Sbjct: 359  DAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 305  XXXXSDEKXXXXXXSVPAKKVKLENSIVKDEXXXXXXXXXXXXXXXXTARPGSSTPSTAA 126
                 D K        P KK       VK+E                +++ G ++  T  
Sbjct: 419  KLNADDAK---TSNGAPVKKE--VKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGP 473

Query: 125  VTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            VTEEEIRAV+   GPVTTQDLVA+FKSRL+ PEDKK FADI
Sbjct: 474  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADI 514


>ref|XP_004983299.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X2 [Setaria italica]
          Length = 530

 Score =  452 bits (1164), Expect = e-124
 Identities = 267/527 (50%), Positives = 315/527 (59%), Gaps = 13/527 (2%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLKP C GCG+ SDLYG+GCKHTTLC  CGKSMA +R RC  C + IT+LIREYNV
Sbjct: 3    SADLVLKPACEGCGNTSDLYGTGCKHTTLCSECGKSMARSRARCLVCSSPITRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A TDK + IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANAITDKTYSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQS+TATY+LLM  GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E S + KK K+N       
Sbjct: 183  MNKRKTSATGYERWMMKAAANGPAAFGSDIKKLEATNSGEKE-SGRPKKAKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRLGL                              EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                             +       
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNDSDADEDE 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                       SPVLAPKQKD  KDEPV ++P++ TP                       
Sbjct: 361  EEEDEDE---SSPVLAPKQKDQVKDEPVDNSPAKQTPSG-HARSTPPASKFKQKRKSGAD 416

Query: 290  DEKXXXXXXSVPAKKVKLEN----SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPST--- 132
            D K         +KK K+E+    S +K+E                +A+P S T ++   
Sbjct: 417  DTK---TSGGAASKKAKVESDTKASGIKEE-------------APASAKPTSKTSASSKS 460

Query: 131  ----AAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                + VTE+EIR+V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 461  GTNVSPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 507


>ref|XP_004983298.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Setaria italica]
          Length = 531

 Score =  452 bits (1164), Expect = e-124
 Identities = 268/527 (50%), Positives = 316/527 (59%), Gaps = 13/527 (2%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLKP C GCG+ SDLYG+GCKHTTLC  CGKSMA +R RC  C + IT+LIREYNV
Sbjct: 3    SADLVLKPACEGCGNTSDLYGTGCKHTTLCSECGKSMARSRARCLVCSSPITRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA+A TDK + IGR+V+GLPPFSK  SAEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANAITDKTYSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQS+TATY+LLM  GKEF A+PAGSWYNF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E S + KK K+N       
Sbjct: 183  MNKRKTSATGYERWMMKAAANGPAAFGSDIKKLEATNSGEKE-SGRPKKAKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRLGL                              EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEAARKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                             +       
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNDSDADEDE 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   E   SPVLAPKQKD  KDEPV ++P++ TP                       
Sbjct: 361  EEEDQEDE--SSPVLAPKQKDQVKDEPVDNSPAKQTPSG-HARSTPPASKFKQKRKSGAD 417

Query: 290  DEKXXXXXXSVPAKKVKLEN----SIVKDEXXXXXXXXXXXXXXXXTARPGSSTPST--- 132
            D K         +KK K+E+    S +K+E                +A+P S T ++   
Sbjct: 418  DTK---TSGGAASKKAKVESDTKASGIKEE-------------APASAKPTSKTSASSKS 461

Query: 131  ----AAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                + VTE+EIR+V+ A  PVTTQDLV++FKSRL+ PEDK  FA+I
Sbjct: 462  GTNVSPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEI 508


>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao]
          Length = 549

 Score =  448 bits (1153), Expect = e-123
 Identities = 264/533 (49%), Positives = 307/533 (57%), Gaps = 18/533 (3%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MSFDL+LK  CSGCGS  DLYGS CKH TLC++CGK+MA N+G+C  CGA +T+LIREYN
Sbjct: 1    MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VR S STDK F+IGR++SGLP FS K +AEN+WSL KEGLQGRQLTD LREKYKNKPW+L
Sbjct: 61   VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEE 1011
            EDETGQ Q+QG LEGSQS  ATY+LLMMQGKEF+A PAGSWYNF K+AQYKQLTLEEAEE
Sbjct: 121  EDETGQAQYQGHLEGSQS--ATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEE 178

Query: 1010 KMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            KM  RR  A GYERWMMKAA NGAAAFGE++K +    + A G  + K    +       
Sbjct: 179  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSD 238

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      ARKNRLGL+                             EHEE FTDDDEA
Sbjct: 239  RGEEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEA 298

Query: 650  VGNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXX 474
            VGN+PEER DLAPE+PAPPEIK+         +                   LN      
Sbjct: 299  VGNEPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADD 357

Query: 473  XXXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXX 294
                    ++  +P  A KQKD PK+EP  ++P +                         
Sbjct: 358  DDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARGTSTASKSAKGKRKANG 417

Query: 293  SDEKXXXXXXSVPAKKVKLE---NSIVKDEXXXXXXXXXXXXXXXXTARPGS-------- 147
             D K        P KKVK E    S VK+E                +A+ GS        
Sbjct: 418  DDTK---ASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSS 474

Query: 146  -----STPSTAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
                 S  +   VTEEEIRAV+    PVTT DLVAKFK+RLK+PEDKK FADI
Sbjct: 475  SAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADI 527


>ref|NP_001148823.1| LOC100282440 [Zea mays] gi|195622396|gb|ACG33028.1| transcription
            initiation factor IIF, alpha subunit [Zea mays]
            gi|413934391|gb|AFW68942.1| transcription initiation
            factor IIF, alpha subunit [Zea mays]
          Length = 531

 Score =  443 bits (1139), Expect = e-121
 Identities = 263/525 (50%), Positives = 309/525 (58%), Gaps = 11/525 (2%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCG+ SDLYG+GCKHTTLC  CGKSMA +R RC  C A IT+LIREYNV
Sbjct: 3    SADLVLKMACEGCGNTSDLYGTGCKHTTLCSDCGKSMARSRARCLVCSAPITRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA++  DK + IGR+V+GLPPFSK  +AEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQIAENMREKYNKKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQS+TATY+LLM  GKEF A+PAGSW+NF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWFNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E S + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKE-SARPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                       RKNRLGL                              EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEATRKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNESDADEDE 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   +   SPVLAPKQKD  KDEPV S+PS+  P P                     
Sbjct: 361  EDEDQEDD--SSPVLAPKQKDQVKDEPVDSSPSK--PAPSGHARGTPPASKSKQKRKSGV 416

Query: 290  DEKXXXXXXSVPAKKVKLE--NSIVKDEXXXXXXXXXXXXXXXXTARPGSST-------P 138
            D+       +    KV+L+   S +K+E                 A+P S T        
Sbjct: 417  DDAKTSSGAASKKAKVELDAKASGLKEE-------------ASSLAKPASKTSAASKSGT 463

Query: 137  STAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            S + VTE+EIR+V+ A  PVTTQDLV++FKSRL+  EDK  FA+I
Sbjct: 464  SVSPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEI 508


>gb|ACN31587.1| unknown [Zea mays]
          Length = 528

 Score =  441 bits (1135), Expect = e-121
 Identities = 264/523 (50%), Positives = 306/523 (58%), Gaps = 9/523 (1%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCG+ SDLYG+GCKHTTLC  CGKSMA +R RC  C A IT+LIREYNV
Sbjct: 3    SADLVLKMACEGCGNTSDLYGTGCKHTTLCSDCGKSMARSRARCLVCSAPITRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA++  DK + IGR+V+GLPPFSK  +AEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQIAENMREKYNKKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQS+TATY+LLM  GKEF A+PAGSW+NF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWFNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AAFG ++KK E     E E S + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKE-SARPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                       RKNRLGL                              EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEATRKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNESDADEDE 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   +   SPVLAPKQKD  KDEPV S+PS+  P                       
Sbjct: 361  EDEDQEDD--SSPVLAPKQKDQVKDEPVDSSPSKPAPSG-HARGTPPASKSKQKRKSGVD 417

Query: 290  DEKXXXXXXSVPAKKVKLENSIVKDEXXXXXXXXXXXXXXXXTARPGSST-------PST 132
            D K      S  AK  K   S +K+E                 A+P S T        S 
Sbjct: 418  DAKTSSGAASKKAKDAKA--SGLKEE-------------ASSLAKPASKTSAASKSGTSV 462

Query: 131  AAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            + VTE+EIR+V+ A  PVTTQDLV++FKSRL+  EDK  FA+I
Sbjct: 463  SPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEI 505


>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  441 bits (1133), Expect = e-121
 Identities = 257/525 (48%), Positives = 307/525 (58%), Gaps = 10/525 (1%)
 Frame = -2

Query: 1547 MSFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYN 1368
            MS DL+LKP C GCGS +DLYGS CKH TLCL+CGK+MA N+ +C  CGA +T+LIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 1367 VRASASTDKAFYIGRYVSGLPPFS-KNSAENRWSLHKEGLQGRQLTDTLREKYKNKPWIL 1191
            VRAS+ +DK ++IGR+VSGLP FS K SAEN+WSL KEGLQ RQ+TD LREKYKNKPW+L
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 1190 EDETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEE 1011
            EDETGQ QFQG LEG+QS  ATY+LLMM+ KEF+A PAGSWYNF K+AQYKQLTLEEAEE
Sbjct: 121  EDETGQSQFQGHLEGAQS--ATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEE 178

Query: 1010 KMNKRRHNATGYERWMMKAAINGAAAFGELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            KM  R+  A GYERWMMKAA NG AAFGE  + +        G    KK   +       
Sbjct: 179  KMKNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSD 238

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                      AR++RLGLN                             EHEE FTDDDEA
Sbjct: 239  KGEEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEA 298

Query: 650  VGNDPEEREDLAPEIPAPPEIKQ---XXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXX 480
            VGNDPEEREDLAPE+PAPPEIKQ                                     
Sbjct: 299  VGNDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAE 358

Query: 479  XXXXXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXX 300
                      E  + PV+A K KD PK+EP  ++PS+   P V                 
Sbjct: 359  DDDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSK---PAVTGTARGTLSTSKPSKGK 415

Query: 299  XXSDEKXXXXXXSVPAKKVKLEN---SIVKDE--XXXXXXXXXXXXXXXXTARPGSSTP- 138
               +E+        P KKVK+EN   S VKDE                  +++ GSS+P 
Sbjct: 416  RKLNEE-TKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPI 474

Query: 137  STAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            ++  V+EEEIRAV+    P+TTQDLVAKF++RL+ PEDKK FADI
Sbjct: 475  ASGPVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADI 519


>gb|ACL54486.1| unknown [Zea mays]
          Length = 531

 Score =  441 bits (1133), Expect = e-121
 Identities = 262/525 (49%), Positives = 308/525 (58%), Gaps = 11/525 (2%)
 Frame = -2

Query: 1544 SFDLVLKPCCSGCGSASDLYGSGCKHTTLCLSCGKSMAANRGRCQHCGAFITQLIREYNV 1365
            S DLVLK  C GCG+ SDLYG+GCKHTTLC  CGKSMA +R RC  C A IT+LIREYNV
Sbjct: 3    SADLVLKMACEGCGNTSDLYGTGCKHTTLCSDCGKSMARSRARCLVCSAPITRLIREYNV 62

Query: 1364 RASASTDKAFYIGRYVSGLPPFSKN-SAENRWSLHKEGLQGRQLTDTLREKYKNKPWILE 1188
            RA++  DK + IGR+V+GLPPFSK  +AEN+WSLHKEGLQGRQ+ + +REKY  KPWILE
Sbjct: 63   RANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQIAENMREKYNKKPWILE 122

Query: 1187 DETGQFQFQGQLEGSQSSTATYFLLMMQGKEFLAFPAGSWYNFTKIAQYKQLTLEEAEEK 1008
            DETGQ+Q+QGQ+EGSQS+TATY+LLM  GKEF A+PAGSW+NF+KIAQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWFNFSKIAQYKQLTLEEAEEK 182

Query: 1007 MNKRRHNATGYERWMMKAAINGAAAFG-ELKKNEGITKAEAEGSNKAKKGKSNXXXXXXX 831
            MNKR+ +ATGYERWMMKAA NG AA G ++KK E     E E S + KKGK+N       
Sbjct: 183  MNKRKTSATGYERWMMKAAANGPAALGSDMKKLEATNGGEKE-SARPKKGKNNEEGNNSD 241

Query: 830  XXXXXXXXXEARKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHEETFTDDDEA 651
                       RKNRLGL                              EHEETFTDDDEA
Sbjct: 242  KGEEDEEEEATRKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA 300

Query: 650  VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXDXXXXXXXXXXXXXXXXXXXLNXXXXXXX 471
            V  DPEER DLAPEIPAPPEIKQ                                     
Sbjct: 301  VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNESDADEDE 360

Query: 470  XXXXXXXEIVMSPVLAPKQKDTPKDEPVVSTPSRATPPPVXXXXXXXXXXXXXXXXXXXS 291
                   +   SPVLAPKQKD  KDEPV S+PS+  P P                     
Sbjct: 361  EDEDQEDD--SSPVLAPKQKDQVKDEPVDSSPSK--PAPSGHARGTPPASKSKQKRKSGV 416

Query: 290  DEKXXXXXXSVPAKKVKLE--NSIVKDEXXXXXXXXXXXXXXXXTARPGSST-------P 138
            D+       +    KV+L+   S +K+E                 A+P S T        
Sbjct: 417  DDAKTSSGAASKKAKVELDAKASGLKEE-------------ASSLAKPASKTSAASKSGT 463

Query: 137  STAAVTEEEIRAVVAAGGPVTTQDLVAKFKSRLKAPEDKKIFADI 3
            S + VTE+EIR+V+ A  PVTTQDLV++FKSRL+  EDK  FA+I
Sbjct: 464  SVSPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEI 508