BLASTX nr result
ID: Zingiber24_contig00005066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00005066
(792 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [A... 145 2e-32
sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein 141 2e-31
gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlise... 141 3e-31
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ... 141 3e-31
ref|XP_006660948.1| PREDICTED: HMG1/2-like protein-like [Oryza b... 140 4e-31
ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group] g... 140 7e-31
emb|CBI37645.3| unnamed protein product [Vitis vinifera] 139 9e-31
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil] 137 4e-30
gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum] 137 4e-30
gb|ADM47612.1| high mobility group protein [Hevea brasiliensis] 137 4e-30
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li... 137 4e-30
tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m... 137 6e-30
ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus... 137 6e-30
gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D ... 137 6e-30
ref|XP_004957577.1| PREDICTED: HMG1/2-like protein-like [Setaria... 136 7e-30
tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m... 136 7e-30
tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea m... 136 7e-30
ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly facto... 135 1e-29
ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum... 134 4e-29
ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform ... 134 4e-29
>ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [Amborella trichopoda]
gi|548859521|gb|ERN17201.1| hypothetical protein
AMTR_s00044p00160130 [Amborella trichopoda]
Length = 156
Score = 145 bits (366), Expect = 2e-32
Identities = 70/97 (72%), Positives = 78/97 (80%)
Frame = -3
Query: 658 RKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVGKAGGD 479
+ +ERASK K K +KDPNKPKRP SAFFVFME FRKTFKE+HPNNKSV+ VGKAGGD
Sbjct: 26 KPATERASKPAKKGKPEKDPNKPKRPASAFFVFMEEFRKTFKEKHPNNKSVAAVGKAGGD 85
Query: 478 KWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAE 368
KWKSLSE +KAP+V KA K KTEY K LA YN+ Q E
Sbjct: 86 KWKSLSEAEKAPYVAKAGKRKTEYEKNLAAYNKKQKE 122
>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 141 bits (356), Expect = 2e-31
Identities = 69/105 (65%), Positives = 81/105 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
+KLAV+K +A+ K KA KDPNKPKRPPSAFFVFME FRKT+KE+HPNNKSV+VVG
Sbjct: 12 NKLAVKK---QAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVG 68
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEGVS 359
KAGGDKWK L+ +KAPF+ KA K K EY K L YN+ QA G +
Sbjct: 69 KAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGAA 113
>gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlisea aurea]
Length = 152
Score = 141 bits (355), Expect = 3e-31
Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
Frame = -3
Query: 673 SKLAVRKGSERASKMP-KMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVV 497
+KL+V++G+ A K P K K KDPNKPKRP SAFFVFME FRKT+KE+HPNNKSV+ V
Sbjct: 17 AKLSVKRGAAAAGKNPAKKAKPTKDPNKPKRPASAFFVFMEEFRKTYKEKHPNNKSVAAV 76
Query: 496 GKAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
GKAGGDKWKSLS+ +KAP++ KA K KT+Y K+L YN+ +EG
Sbjct: 77 GKAGGDKWKSLSDAEKAPYIAKADKRKTDYEKELQAYNKKLSEG 120
>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high
mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product
[Vitis vinifera]
Length = 153
Score = 141 bits (355), Expect = 3e-31
Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 2/105 (1%)
Frame = -3
Query: 673 SKLAVRKGSE--RASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSV 500
+KL+V+KG+ +A K K K KDPNKPKRP SAFFVFME FRK +KE+HP+NKSVSV
Sbjct: 15 AKLSVKKGAAATKAGKKTKKEKPVKDPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSV 74
Query: 499 VGKAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
VGKAGGDKWKS+SE +KAP+V KA K K EY K + YN+ QAEG
Sbjct: 75 VGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQAEG 119
>ref|XP_006660948.1| PREDICTED: HMG1/2-like protein-like [Oryza brachyantha]
Length = 127
Score = 140 bits (354), Expect = 4e-31
Identities = 70/103 (67%), Positives = 79/103 (76%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWKS+S+ DKAPFV KA KLK EYTKK+ YN QA G
Sbjct: 61 KAGGDKWKSMSDADKAPFVAKAEKLKAEYTKKIDAYNNKQAGG 103
>ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa
Japonica Group] gi|113632102|dbj|BAF25783.1|
Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type
nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group] gi|215694881|dbj|BAG90072.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 127
Score = 140 bits (352), Expect = 7e-31
Identities = 69/103 (66%), Positives = 79/103 (76%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWKS+++ DKAPFV KA KLK EYTKK+ YN QA G
Sbjct: 61 KAGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGG 103
>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 139 bits (351), Expect = 9e-31
Identities = 71/105 (67%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = -3
Query: 673 SKLAVRKGSERA--SKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSV 500
SKL+V+K A K K KA KDPNKPKRP SAFFVFME FRK +KE+HP NKSVSV
Sbjct: 16 SKLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSV 75
Query: 499 VGKAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
VGKAGGDKWKSLSE +KAP+V KA K KTEY K + YN+ AEG
Sbjct: 76 VGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEG 120
>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 137 bits (345), Expect = 4e-30
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
+KLAV+K R + K K+ KDPNKPKRPPSAFFVFME FRKT+KE+HPNNKSV+ VG
Sbjct: 12 NKLAVKK---RGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVG 68
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQA 371
KAGGDKWK L++ +KAPF+ KA K K EY K + YNR QA
Sbjct: 69 KAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQA 109
>gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 137 bits (345), Expect = 4e-30
Identities = 68/101 (67%), Positives = 77/101 (76%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
SKL VRK +A++ K KA KDPNKPKRPPSAFFVFME FRKT+KE+HPNNKSV+ VG
Sbjct: 12 SKLGVRK---KATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVG 68
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQA 371
KAGGD WK LSE +KAP+ KA K K EY K + YNR QA
Sbjct: 69 KAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQA 109
>gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 137 bits (345), Expect = 4e-30
Identities = 68/103 (66%), Positives = 80/103 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
++L+V K +ASK K KA KDPNKPKRP SAFFVFME FR+ +K++HP NKSV+ VG
Sbjct: 14 NRLSVNKKPAKASK--KSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVG 71
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWKSLSE +KAP+V KA K K EY KKL YN+ QAEG
Sbjct: 72 KAGGDKWKSLSEAEKAPYVAKAEKRKVEYEKKLKAYNKGQAEG 114
>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 137 bits (345), Expect = 4e-30
Identities = 69/105 (65%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = -3
Query: 673 SKLAVRKGSERA--SKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSV 500
++L+V+K A K K KA KDPNKPKRP SAFFVFME FRK +KE+HP NKSVSV
Sbjct: 18 ARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSV 77
Query: 499 VGKAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
VGKAGGDKWKSLSE +KAP+V KA K KTEY K + YN+ AEG
Sbjct: 78 VGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEG 122
>tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 137 bits (344), Expect = 6e-30
Identities = 67/101 (66%), Positives = 78/101 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQA 371
KAGGDKWKSLS+ +KAP+V KA KLK EYTKK+ YN Q+
Sbjct: 61 KAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQS 101
>ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B,
putative [Ricinus communis]
Length = 145
Score = 137 bits (344), Expect = 6e-30
Identities = 68/103 (66%), Positives = 80/103 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
SKL+V K +A+K K KA KDPNKPKRP SAFFVFME FR+ +K++HP NKSV+ VG
Sbjct: 13 SKLSVNKKPVKATK--KAGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVG 70
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGD+WKS+SE +KAPFV KA K K EY KKL YN+ QAEG
Sbjct: 71 KAGGDRWKSMSESEKAPFVAKAEKRKIEYEKKLKAYNKGQAEG 113
>gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like
nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 137 bits (344), Expect = 6e-30
Identities = 67/101 (66%), Positives = 78/101 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQA 371
KAGGDKWKSLS+ +KAP+V KA KLK EYTKK+ YN Q+
Sbjct: 61 KAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQS 101
>ref|XP_004957577.1| PREDICTED: HMG1/2-like protein-like [Setaria italica]
Length = 126
Score = 136 bits (343), Expect = 7e-30
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK +KA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------SKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWKSLSE +KAPFV KA KLK EYTKK+ YN + G
Sbjct: 61 KAGGDKWKSLSEAEKAPFVTKAEKLKAEYTKKMDAYNNKPSGG 103
>tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 136 bits (343), Expect = 7e-30
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQ 374
KAGGDKWKSLS+ +KAP+V KA KLK EYTKK+ YN Q
Sbjct: 61 KAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 136 bits (343), Expect = 7e-30
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VSV+G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQ 374
KAGGDKWKSLS+ +KAP+V KA KLK EYTKK+ YN Q
Sbjct: 61 KAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like
nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 135 bits (341), Expect = 1e-29
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
S+L+VRK TKA+KDPNKPKRPPSAFFVFME FRK +KE+HPN K VS++G
Sbjct: 12 SRLSVRK-----------TKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIG 60
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQA 371
KAGGDKWKSLS+ +KAP+V KA KLK EYTKK+ YN Q+
Sbjct: 61 KAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQS 101
>ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum tuberosum]
Length = 141
Score = 134 bits (337), Expect = 4e-29
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
+KL VRK +A++ K A KDPNKPKRPPSAFFVFME FRKT+KE+HPNNKSV+VVG
Sbjct: 12 TKLGVRK---KATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVG 68
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWK LS+ +KAP+ KA K K EY K + YN+ A G
Sbjct: 69 KAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAG 111
>ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Solanum
lycopersicum]
Length = 140
Score = 134 bits (337), Expect = 4e-29
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = -3
Query: 673 SKLAVRKGSERASKMPKMTKAKKDPNKPKRPPSAFFVFMEGFRKTFKEQHPNNKSVSVVG 494
+KL VRK +A++ K A KDPNKPKRPPSAFFVFME FRKT+KE+HPNNKSV+VVG
Sbjct: 12 TKLGVRK---KATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVG 68
Query: 493 KAGGDKWKSLSEGDKAPFVDKAAKLKTEYTKKLATYNRNQAEG 365
KAGGDKWK LS+ +KAP+ KA K K EY K + YN+ A G
Sbjct: 69 KAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKSMDAYNKKLAAG 111