BLASTX nr result
ID: Zingiber24_contig00004778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00004778
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW83500.1| hypothetical protein ZEAMMB73_680171 [Zea mays] 72 8e-11
ref|XP_002458280.1| hypothetical protein SORBIDRAFT_03g030610 [S... 72 8e-11
ref|NP_001057602.2| Os06g0359400 [Oryza sativa Japonica Group] g... 72 1e-10
ref|XP_006644489.1| PREDICTED: 60S ribosomal protein L18a-like p... 70 3e-10
ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like... 69 7e-10
gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays] 67 2e-09
gb|AFW76724.1| hypothetical protein ZEAMMB73_624022 [Zea mays] 67 2e-09
ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [S... 66 4e-09
dbj|BAJ99681.1| predicted protein [Hordeum vulgare subsp. vulgar... 65 1e-08
ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isofor... 65 1e-08
emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinife... 65 1e-08
ref|NP_001043806.1| Os01g0667100 [Oryza sativa Japonica Group] g... 64 2e-08
gb|EAY75299.1| hypothetical protein OsI_03190 [Oryza sativa Indi... 64 2e-08
ref|XP_003569522.1| PREDICTED: 60S ribosomal protein L18a-1-like... 63 4e-08
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ... 63 4e-08
ref|XP_006305734.1| hypothetical protein CARUB_v10010518mg [Caps... 63 5e-08
gb|EOY13632.1| 60S ribosomal protein L18a, plant, putative [Theo... 62 6e-08
ref|XP_006415527.1| hypothetical protein EUTSA_v10009933mg [Eutr... 62 8e-08
dbj|BAJ94702.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 8e-08
gb|ABK23722.1| unknown [Picea sitchensis] 62 8e-08
>gb|AFW83500.1| hypothetical protein ZEAMMB73_680171 [Zea mays]
Length = 183
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Frame = -3
Query: 235 PTAP--LLHYPPKAPLQYQSTPQPAGGYHAIPV----GYQF-QPFPNVVDGIPMNARVPP 77
P AP + HYP P Y P P Y A GYQ Q + VV+G P+ R+ P
Sbjct: 56 PAAPPGMQHYPQPPPASYAVYPPPQQPYSAAAPYYAQGYQIAQGYIPVVEGRPV--RIRP 113
Query: 76 LPFCGIGVGWALFVVGFLFASIPWY 2
LP CG+G+GW LF++GF FA+IPWY
Sbjct: 114 LPCCGLGMGWFLFIIGFFFAAIPWY 138
>ref|XP_002458280.1| hypothetical protein SORBIDRAFT_03g030610 [Sorghum bicolor]
gi|241930255|gb|EES03400.1| hypothetical protein
SORBIDRAFT_03g030610 [Sorghum bicolor]
Length = 186
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/119 (37%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Frame = -3
Query: 325 PPSTP------YGTFIXXXXXXXXXXXXXXLQKATLPTAPLLHYPPKAPLQYQSTPQPAG 164
PPS P YGTF P + HYP + P Y P P
Sbjct: 25 PPSAPPQHQHQYGTFGPPSGASGQFPQPAVGFPQPAPPPGMQHYPQQPPASYAVYPPPQQ 84
Query: 163 GYHAIPV----GYQF-QPFPNVVDGIPMNARVPPLPFCGIGVGWALFVVGFLFASIPWY 2
Y A GYQ Q + VV+G P+ R PLP CG+G+GW LF++GF FA+IPWY
Sbjct: 85 PYAAAAPYYAQGYQVAQGYIPVVEGRPVRMR--PLPCCGLGMGWFLFILGFFFAAIPWY 141
>ref|NP_001057602.2| Os06g0359400 [Oryza sativa Japonica Group]
gi|222635550|gb|EEE65682.1| hypothetical protein
OsJ_21300 [Oryza sativa Japonica Group]
gi|255677033|dbj|BAF19516.2| Os06g0359400 [Oryza sativa
Japonica Group]
Length = 156
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = -3
Query: 211 PPKAPLQYQSTPQPAGGYHAIPVGYQFQ---PFPN------VVDGIPMNARVPPLPFCGI 59
PP Q Q P A H P GY Q FP +V+G+P+ R PPLPFCGI
Sbjct: 36 PPPPQQQQQQKPDGAASNHPFPAGYAAQGVVAFPCTVQQLVLVEGVPI--REPPLPFCGI 93
Query: 58 GVGWALFVVGFLFASIPWY 2
G+GW LF++GF A++PWY
Sbjct: 94 GLGWILFLLGFFLAALPWY 112
>ref|XP_006644489.1| PREDICTED: 60S ribosomal protein L18a-like protein-like [Oryza
brachyantha]
Length = 181
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = -3
Query: 325 PPSTPYGTFIXXXXXXXXXXXXXXLQKATLPTAPLLHYPPKAPLQYQSTPQPAGGYHAIP 146
PP YGTF P HYPP P Y P P A P
Sbjct: 27 PPQHQYGTFGAPPPATGELPQPAVGFPQPAPPPGFRHYPPPPPASYAVYPPPQTYTAAAP 86
Query: 145 V---GYQ-FQPFPNVVDGIPMNARVPPLPFCGIGVGWALFVVGFLFASIPWY 2
GYQ Q + VV+G P+ R+ LP CG+G+GW LF++GF A+IPWY
Sbjct: 87 YYAQGYQAVQGYIPVVEGRPV--RMQRLPCCGLGMGWFLFIIGFFLAAIPWY 136
>ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like [Setaria italica]
Length = 156
Score = 68.9 bits (167), Expect = 7e-10
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 9/80 (11%)
Frame = -3
Query: 214 YPPKAPLQYQSTPQPAGGYHAIPVGYQFQ---PFPNVV------DGIPMNARVPPLPFCG 62
+PP PLQ T A YHA PVG+ Q FP+ V +G+P+ R PPLPFCG
Sbjct: 39 FPP--PLQPPLTLGAA--YHASPVGFGGQGVVAFPSAVQQQVFVEGVPV--REPPLPFCG 92
Query: 61 IGVGWALFVVGFLFASIPWY 2
+G+GW LF++GF A+IPWY
Sbjct: 93 VGIGWFLFLLGFFLAAIPWY 112
>gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays]
Length = 161
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Frame = -3
Query: 160 YHAIPVGYQFQPF---PNVV------DGIPMNARVPPLPFCGIGVGWALFVVGFLFASIP 8
YHA P+G+ Q F P V +GIP+ R PPLPFCG+GVGW LF++GF A+IP
Sbjct: 58 YHASPIGFGSQGFVASPGAVQQQVFVEGIPV--REPPLPFCGVGVGWFLFLLGFFLAAIP 115
Query: 7 WY 2
WY
Sbjct: 116 WY 117
>gb|AFW76724.1| hypothetical protein ZEAMMB73_624022 [Zea mays]
Length = 149
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Frame = -3
Query: 160 YHAIPVGYQFQPF---PNVV------DGIPMNARVPPLPFCGIGVGWALFVVGFLFASIP 8
YHA P+G+ Q F P V +GIP+ R PPLPFCG+GVGW LF++GF A+IP
Sbjct: 58 YHASPIGFGSQGFVASPGAVQQQVFVEGIPV--REPPLPFCGVGVGWFLFLLGFFLAAIP 115
Query: 7 WY 2
WY
Sbjct: 116 WY 117
>ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [Sorghum bicolor]
gi|241941431|gb|EES14576.1| hypothetical protein
SORBIDRAFT_07g003840 [Sorghum bicolor]
Length = 164
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/108 (39%), Positives = 56/108 (51%), Gaps = 25/108 (23%)
Frame = -3
Query: 250 QKATLPTAPLLHYPPKA-PLQYQ----STPQP--------AGGYHAIPVG----YQFQPF 122
Q + +P L P A PL+YQ + PQP A YHA +G F F
Sbjct: 15 QSQSSSPSPSLSAPTAANPLRYQHGYGTFPQPSTPPVVGAAAAYHASLIGGFGGQGFVAF 74
Query: 121 PNVV--------DGIPMNARVPPLPFCGIGVGWALFVVGFLFASIPWY 2
P V +G+P+ R PPLPFCG+G+GW LF++GF A+IPWY
Sbjct: 75 PCAVQQQVVVEAEGVPV--REPPLPFCGVGIGWFLFLLGFFLAAIPWY 120
>dbj|BAJ99681.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533074|dbj|BAJ93509.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 186
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Frame = -3
Query: 217 HYPPKAPLQYQSTP-----QPAGGYHAIPVGYQ-FQPFPNVVDGIPMNARVPPLPFCGIG 56
+YPP P Y P PA Y+A GYQ Q + VV+G P+ R LP CG+G
Sbjct: 68 NYPPPPPPSYAVYPPLQPFSPAAPYYA--QGYQAVQGYIPVVEGRPVRMR--RLPCCGLG 123
Query: 55 VGWALFVVGFLFASIPWY 2
+GW LF++GF FA+IPWY
Sbjct: 124 MGWFLFIIGFFFAAIPWY 141
>ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isoform 2 [Vitis vinifera]
Length = 299
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/81 (44%), Positives = 46/81 (56%)
Frame = -3
Query: 244 ATLPTAPLLHYPPKAPLQYQSTPQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFC 65
A P P H+P P+ P P GY++ GYQ P VV+G P+ R LP C
Sbjct: 27 ANYPPLPPAHHPQ--PVIGIPQPVPPPGYYSH--GYQTVPGYAVVEGRPVRER--RLPCC 80
Query: 64 GIGVGWALFVVGFLFASIPWY 2
GIG+GW LF++GF A+IPWY
Sbjct: 81 GIGIGWLLFIIGFFCAAIPWY 101
>emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinifera]
gi|297740676|emb|CBI30858.3| unnamed protein product
[Vitis vinifera]
Length = 145
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/81 (44%), Positives = 46/81 (56%)
Frame = -3
Query: 244 ATLPTAPLLHYPPKAPLQYQSTPQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFC 65
A P P H+P P+ P P GY++ GYQ P VV+G P+ R LP C
Sbjct: 27 ANYPPLPPAHHPQ--PVIGIPQPVPPPGYYSH--GYQTVPGYAVVEGRPVRER--RLPCC 80
Query: 64 GIGVGWALFVVGFLFASIPWY 2
GIG+GW LF++GF A+IPWY
Sbjct: 81 GIGIGWLLFIIGFFCAAIPWY 101
>ref|NP_001043806.1| Os01g0667100 [Oryza sativa Japonica Group]
gi|56202166|dbj|BAD73644.1| 60S ribosomal protein
L18A-like [Oryza sativa Japonica Group]
gi|113533337|dbj|BAF05720.1| Os01g0667100 [Oryza sativa
Japonica Group] gi|125571505|gb|EAZ13020.1| hypothetical
protein OsJ_02941 [Oryza sativa Japonica Group]
Length = 185
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Frame = -3
Query: 235 PTAPLLHYPPKAPLQYQSTPQ-------PAGGYHAIPVGYQ-FQPFPNVVDGIPMNARVP 80
P L HYP P Y P A Y+A+ GYQ Q + VV+G P+ R
Sbjct: 59 PPPGLRHYPQPPPPSYAVYPPLPPQTYPAAAPYYAL--GYQAVQGYIPVVEGRPVRMR-- 114
Query: 79 PLPFCGIGVGWALFVVGFLFASIPWY 2
LPFCG+G+GW LF++GF A+IPWY
Sbjct: 115 RLPFCGLGMGWFLFIIGFFLAAIPWY 140
>gb|EAY75299.1| hypothetical protein OsI_03190 [Oryza sativa Indica Group]
Length = 521
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 YPPKAPLQYQST-PQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCGIGVGWALF 38
YPP P Y + P A GY A+ Q + VV+G P+ R LPFCG+G+GW LF
Sbjct: 77 YPPLPPQTYPAAAPYYAQGYQAV------QGYIPVVEGRPVRMR--RLPFCGLGMGWFLF 128
Query: 37 VVGFLFASIPWY 2
++GF A+IPWY
Sbjct: 129 IIGFFLAAIPWY 140
>ref|XP_003569522.1| PREDICTED: 60S ribosomal protein L18a-1-like [Brachypodium
distachyon]
Length = 187
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 214 YPPKAPLQYQSTPQPAGGYHAIPV---GYQF-QPFPNVVDGIPMNARVPPLPFCGIGVGW 47
YPP P Y P A P GYQ Q + VV+G P+ R LP CG+G+GW
Sbjct: 70 YPPPPPASYAVYPPQQAYSAAAPYYAQGYQVVQGYIPVVEGRPVRMR--RLPCCGLGMGW 127
Query: 46 ALFVVGFLFASIPWY 2
LF+VGF FA+IPWY
Sbjct: 128 FLFIVGFFFAAIPWY 142
>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
plant, putative [Ricinus communis]
Length = 166
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = -3
Query: 217 HYPPKAPLQY------QSTPQP-AGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCGI 59
+YPP P Q+ Q P P A A P GYQ P V +G P+ R LP CGI
Sbjct: 46 NYPPPHPPQHPVIGFPQPVPPPGASEPPAYPHGYQTVPGYAVAEGRPVRER--RLPCCGI 103
Query: 58 GVGWALFVVGFLFASIPWY 2
GVGW LF++GF +IPWY
Sbjct: 104 GVGWFLFIIGFFLGAIPWY 122
>ref|XP_006305734.1| hypothetical protein CARUB_v10010518mg [Capsella rubella]
gi|482574445|gb|EOA38632.1| hypothetical protein
CARUB_v10010518mg [Capsella rubella]
Length = 158
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -3
Query: 232 TAPLLHYP-PKAPLQYQSTPQP--AGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCG 62
+AP+ +P P AP T P A GY +PV V +G P+ R LP CG
Sbjct: 40 SAPVTGFPQPSAPPGVYDTGSPYYAHGYQTVPV------HGGVAEGRPVTGRQRRLPCCG 93
Query: 61 IGVGWALFVVGFLFASIPWY 2
IG+GW LFVVGF +IPWY
Sbjct: 94 IGLGWFLFVVGFFLGAIPWY 113
>gb|EOY13632.1| 60S ribosomal protein L18a, plant, putative [Theobroma cacao]
Length = 163
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/75 (44%), Positives = 39/75 (52%)
Frame = -3
Query: 226 PLLHYPPKAPLQYQSTPQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCGIGVGW 47
P LH P P QY PQ GYQ P V +G P+ R LP CGIG+GW
Sbjct: 57 PGLHEPSAPPPQYYPQPQ----------GYQTVPGYAVAEGRPVRER--RLPCCGIGIGW 104
Query: 46 ALFVVGFLFASIPWY 2
LF++GF +IPWY
Sbjct: 105 FLFIIGFFLGAIPWY 119
>ref|XP_006415527.1| hypothetical protein EUTSA_v10009933mg [Eutrema salsugineum]
gi|557093298|gb|ESQ33880.1| hypothetical protein
EUTSA_v10009933mg [Eutrema salsugineum]
Length = 317
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/83 (40%), Positives = 42/83 (50%)
Frame = -3
Query: 250 QKATLPTAPLLHYPPKAPLQYQSTPQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLP 71
Q LP P+ P YQ+ P GG+ G+ P VV+ PM R LP
Sbjct: 39 QLLPLPQHPVAKNPLFQGHGYQNVQGPGGGFLNYAQGFPVVPEYTVVEVRPM--REHDLP 96
Query: 70 FCGIGVGWALFVVGFLFASIPWY 2
CG G+GW LF++GFLF IPWY
Sbjct: 97 CCGFGMGWFLFIMGFLFGGIPWY 119
>dbj|BAJ94702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -3
Query: 211 PPKAPLQYQST--PQPAGGYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCGIGVGWALF 38
PP A Y + + A G A P Q Q +V+G+P+ R P LPFCG+GVGWALF
Sbjct: 41 PPVAAAAYDPSLKGRSAQGVVAFPCTIQQQV---LVEGLPV--REPRLPFCGVGVGWALF 95
Query: 37 VVGFLFASIPWY 2
++GF A+IPWY
Sbjct: 96 LLGFFLAAIPWY 107
>gb|ABK23722.1| unknown [Picea sitchensis]
Length = 153
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3
Query: 163 GYHAIPVGYQFQPFPNVVDGIPMNARVPPLPFCGIGVGWALFVVGFLFASIPWY 2
GY A+P Q +P VV+ + R LP CGIG+GWALF++GF ASIPWY
Sbjct: 56 GYQAVPGYPSPQVYPPVVEADVVPVRERRLPCCGIGLGWALFIIGFFLASIPWY 109