BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004766
         (1437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   379   e-102
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              379   e-102
gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| un...   375   e-101
ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [...   375   e-101
ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [S...   375   e-101
dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sa...   374   e-101
gb|ACF84977.1| unknown [Zea mays]                                     374   e-101
ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [...   374   e-101
ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195...   373   e-100
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The...   372   e-100
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]     372   e-100
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The...   372   e-100
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   370   1e-99
ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, ...   368   3e-99
dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgar...   368   4e-99
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i...   365   2e-98
gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japo...   364   4e-98
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i...   363   7e-98
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [...   363   1e-97
ref|XP_002532622.1| Far upstream element-binding protein, putati...   363   1e-97

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  379 bits (974), Expect = e-102
 Identities = 209/330 (63%), Positives = 247/330 (74%), Gaps = 8/330 (2%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQ 1071
            ME+P+     SP+  P+RS  PRSPT+   EK T+IR LVSN  AG +IGKGGSTI++FQ
Sbjct: 1    MESPESAYVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQ 60

Query: 1070 SQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRS 897
            SQSGARIQLSRNHE FPGTSDRI+++SG   ++I+AMELI  KL SE+  EDG++A+ RS
Sbjct: 61   SQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRS 120

Query: 896  KVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEEQM 720
            KVRLIVPNSSCG IIGKGGSTIKSFIE+S+A IKISPQDNN  GL DRLVTL G  EEQM
Sbjct: 121  KVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQM 180

Query: 719  RAIFLILSRLIEDAHYPQTLNSPYQY-SAYSPVTYRPXXXXXXXXXXXGTASPVISHPSR 543
            RAI LILS+L ED HY Q +N+P+ Y +AY+ + Y P                       
Sbjct: 181  RAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGP----------------------N 218

Query: 542  SPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGT 375
              GG     +E +SNSVTIG+ADEHIG VVGRGGRNI +ISQ SGARIKISDRGDF+SGT
Sbjct: 219  GAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGT 278

Query: 374  SDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            +DRKVTITGS  AI+ AESMIMQKV+S ++
Sbjct: 279  TDRKVTITGSQRAIRAAESMIMQKVASASE 308


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  379 bits (974), Expect = e-102
 Identities = 209/330 (63%), Positives = 247/330 (74%), Gaps = 8/330 (2%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQ 1071
            ME+P+     SP+  P+RS  PRSPT+   EK T+IR LVSN  AG +IGKGGSTI++FQ
Sbjct: 49   MESPESAYVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQ 108

Query: 1070 SQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRS 897
            SQSGARIQLSRNHE FPGTSDRI+++SG   ++I+AMELI  KL SE+  EDG++A+ RS
Sbjct: 109  SQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRS 168

Query: 896  KVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEEQM 720
            KVRLIVPNSSCG IIGKGGSTIKSFIE+S+A IKISPQDNN  GL DRLVTL G  EEQM
Sbjct: 169  KVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQM 228

Query: 719  RAIFLILSRLIEDAHYPQTLNSPYQY-SAYSPVTYRPXXXXXXXXXXXGTASPVISHPSR 543
            RAI LILS+L ED HY Q +N+P+ Y +AY+ + Y P                       
Sbjct: 229  RAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGP----------------------N 266

Query: 542  SPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGT 375
              GG     +E +SNSVTIG+ADEHIG VVGRGGRNI +ISQ SGARIKISDRGDF+SGT
Sbjct: 267  GAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGT 326

Query: 374  SDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            +DRKVTITGS  AI+ AESMIMQKV+S ++
Sbjct: 327  TDRKVTITGSQRAIRAAESMIMQKVASASE 356


>gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| unknown [Zea mays]
            gi|413924015|gb|AFW63947.1| transcribed sequence 1087
            protein [Zea mays]
          Length = 344

 Score =  375 bits (964), Expect = e-101
 Identities = 210/346 (60%), Positives = 253/346 (73%), Gaps = 24/346 (6%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA--------GDD-EKQTHIRILVSNTEAGCIIGK 1098
            MEAP      SP++AP+R+  PRSP          GDD EK TH+R LVSNT AGCIIGK
Sbjct: 1    MEAPGSPYASSPESAPKRA--PRSPPQQQQSPSEEGDDKEKPTHLRFLVSNTAAGCIIGK 58

Query: 1097 GGSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDG 918
            GGSTI++FQSQSGARIQLSR++E FPGT+DRI++VSG+  +V++AMELI EKL +E E+ 
Sbjct: 59   GGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEF 118

Query: 917  NDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLT 741
            N+AE R KVRL+VPNSSCG IIGKGG+TIKSFIEES AGIKISPQDNN  GL+DRLVT+T
Sbjct: 119  NEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTIT 178

Query: 740  GLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPV 561
            G F+ QM AI LIL +L ED HYP  L+SP+ Y+  +  +Y P             ++ V
Sbjct: 179  GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSY-PGVPVGYMIPQVPYSNAV 237

Query: 560  ISHPSRSPGGPQEGQ--------------SNSVTIGIADEHIGAVVGRGGRNITEISQVS 423
               P+   GG  +                  S+TIGIADEHIGAVVGR GRNITEI Q S
Sbjct: 238  NYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQAS 297

Query: 422  GARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            GARIKISDRGD+ISGTSDRKVTITG+PEAI+TAESMIMQ+VS++++
Sbjct: 298  GARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSE 343


>ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [Setaria italica]
          Length = 344

 Score =  375 bits (962), Expect = e-101
 Identities = 211/345 (61%), Positives = 251/345 (72%), Gaps = 23/345 (6%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA--------GDD-EKQTHIRILVSNTEAGCIIGK 1098
            MEAP      SP++AP+R+  PRSP          GDD EK TH+R LVSNT AGCIIGK
Sbjct: 1    MEAPGSPYASSPESAPKRA--PRSPPQQQQQPSEEGDDKEKPTHLRFLVSNTAAGCIIGK 58

Query: 1097 GGSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDG 918
            GGSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+  +V++AMELI EKL +E E+ 
Sbjct: 59   GGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEF 118

Query: 917  NDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLT 741
             +AE R KVRL+VPNSSCG IIGKGG+TIKSFIEES AGIKISPQDNN AGL+DRLVT+T
Sbjct: 119  QEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYAGLHDRLVTVT 178

Query: 740  GLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYS-------PVTYR-PXXXXXXXXX 585
            G F+ QM AI LIL +L ED HYP  L+SP+ Y+  +       PV Y  P         
Sbjct: 179  GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAVN 238

Query: 584  XXGTASPVISHPSRSPGGPQEGQSN-----SVTIGIADEHIGAVVGRGGRNITEISQVSG 420
                      + +  P  P    +N     S+TIG+ADEHIGAVVGR GRNITEI Q SG
Sbjct: 239  YGPNGYGGGRYQNNKPSTPMRSPANNDAQESLTIGVADEHIGAVVGRAGRNITEIIQASG 298

Query: 419  ARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            ARIKISDRGDFISGTSDRKVTITG+ EAI+TAESMIMQ+VS++++
Sbjct: 299  ARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSE 343


>ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
            gi|241932895|gb|EES06040.1| hypothetical protein
            SORBIDRAFT_04g037690 [Sorghum bicolor]
          Length = 343

 Score =  375 bits (962), Expect = e-101
 Identities = 211/345 (61%), Positives = 250/345 (72%), Gaps = 23/345 (6%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA-------GDD-EKQTHIRILVSNTEAGCIIGKG 1095
            MEAP      SP++AP+R+  PRSP         GDD EK TH+R LVSNT AGCIIGKG
Sbjct: 1    MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPTHLRFLVSNTAAGCIIGKG 58

Query: 1094 GSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDGN 915
            GSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+  +V++AMELI EKL +E E+ N
Sbjct: 59   GSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEFN 118

Query: 914  DAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTG 738
            +AE R KVRL+VPNSSCG IIGKGG+TIKSFIEES AGIKISPQDNN  GL+DRLVT+TG
Sbjct: 119  EAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG 178

Query: 737  LFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVI 558
             F+ QM AI LIL +L ED HYP  L+SP+ Y+  +   Y P              + V 
Sbjct: 179  TFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPNY-PGVPVGYMIPQVPYNNAVN 237

Query: 557  SHPSRSPGGPQEGQ--------------SNSVTIGIADEHIGAVVGRGGRNITEISQVSG 420
              P+   GG  +                  S+TIGIADEHIGAVVGR GRNITEI Q SG
Sbjct: 238  YGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASG 297

Query: 419  ARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            ARIKISDRGDFISGTSDRKVTITG+ EAI+TAESMIMQ+VS++++
Sbjct: 298  ARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSE 342


>dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica Group]
            gi|48716520|dbj|BAD23125.1| KH domain-containing protein
            NOVA-like [Oryza sativa Japonica Group]
          Length = 343

 Score =  374 bits (960), Expect = e-101
 Identities = 207/342 (60%), Positives = 247/342 (72%), Gaps = 20/342 (5%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSP-------TAGDDEKQTHIRILVSNTEAGCIIGKGG 1092
            MEAP      SP++AP+R+     P       +  D EK TH+R LVSNT AGCIIGKGG
Sbjct: 1    MEAPGSPYASSPESAPKRAPRSSPPPPQQQASSEDDKEKPTHLRFLVSNTAAGCIIGKGG 60

Query: 1091 STISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDGND 912
            STI+EFQSQSGARIQLSR+HE FPGT+DRI++VSG+  +VI+AMELI EKL +E E+ N+
Sbjct: 61   STINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNE 120

Query: 911  AEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGL 735
            AE R KVRL+VPNSSCG IIGKGGSTIKSFIE+S AGIKISPQDNN  GL+DRLVT+TG 
Sbjct: 121  AEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGP 180

Query: 734  FEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYS-------PVTYRPXXXXXXXXXXXG 576
             + QMRAI+LILS+L ED HYP  L+SP+ Y+          PV Y             G
Sbjct: 181  LDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNYG 240

Query: 575  TASPVISHPSRSPGGPQEGQSN-----SVTIGIADEHIGAVVGRGGRNITEISQVSGARI 411
                   + +  P  P    +N     S+TIGIADEHIGAVVGR GRNITEI Q SGARI
Sbjct: 241  PNGYGGRYQNNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARI 300

Query: 410  KISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            KISDRGDFI+GTS+RKVTITG+ EAIQ AESMIMQ+V+++++
Sbjct: 301  KISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRVTASSE 342


>gb|ACF84977.1| unknown [Zea mays]
          Length = 344

 Score =  374 bits (960), Expect = e-101
 Identities = 210/345 (60%), Positives = 250/345 (72%), Gaps = 23/345 (6%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA-------GDD-EKQTHIRILVSNTEAGCIIGKG 1095
            MEAP      SP++AP+R+  PRSP         GDD EK  H+R LVSN  AGCIIGKG
Sbjct: 1    MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKG 58

Query: 1094 GSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDGN 915
            GSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+ G+V++AMELI EKL +E E+ N
Sbjct: 59   GSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFN 118

Query: 914  DAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTG 738
            +AE R KVRL+VPNSSCG IIGKGG+TIKSFIEES AGIKISPQDNN  GL+DRLVT+TG
Sbjct: 119  EAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG 178

Query: 737  LFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVI 558
             F+ QM AI LIL +L ED HYP  L+SP+ Y+  +  +Y P              + V 
Sbjct: 179  TFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSY-PGVPVGYMIPQVPYNNAVN 237

Query: 557  SHPSRSPGGPQEGQ--------------SNSVTIGIADEHIGAVVGRGGRNITEISQVSG 420
              P+   GG  +                  S+TIGIADEHIGAVVGR GRNITEI Q SG
Sbjct: 238  YGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASG 297

Query: 419  ARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            ARIKISDRGDFISGTSDRKVTITG+ EAI+TAESMIMQ+VS++++
Sbjct: 298  ARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSE 342


>ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium distachyon]
          Length = 349

 Score =  374 bits (959), Expect = e-101
 Identities = 210/350 (60%), Positives = 249/350 (71%), Gaps = 28/350 (8%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA--------------GDDEKQTHIRILVSNTEAG 1113
            MEAP      SP+TAP+R+  PRSP                 D EK TH+R LVSNT AG
Sbjct: 1    MEAPGSPYASSPETAPKRA--PRSPPPPQERPETQPEAEPEDDKEKPTHLRFLVSNTAAG 58

Query: 1112 CIIGKGGSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFS 933
            CIIGKGGSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+  +VI+AMEL+ EKL +
Sbjct: 59   CIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELVLEKLLA 118

Query: 932  ELEDGNDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDR 756
            E E+ N+AE R K RL+VPNSSCG IIGKGG+TIK+FIE+S AGIKISPQDNN  GL+DR
Sbjct: 119  EGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNNFVGLHDR 178

Query: 755  LVTLTGLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYS--------AYSPVTYRPXXXX 600
            LVT+TG F  QMRAI+LILS+L ED HYP  L+SP+ Y+        A  PV Y      
Sbjct: 179  LVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAPVPVGYMIPQVP 238

Query: 599  XXXXXXXGTASPVISHPSRSPGGPQEGQS-----NSVTIGIADEHIGAVVGRGGRNITEI 435
                   G       + +  PG P    +      S TIG+ADEHIGAVVGR GRNITEI
Sbjct: 239  YNNAVNYGPNGYGGRYQNNKPGTPVRSPATNDAQESHTIGVADEHIGAVVGRAGRNITEI 298

Query: 434  SQVSGARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
             Q SGARIKISDRGDFI+GTSDRKVTITG+PEAIQ AESMIMQ+VS++++
Sbjct: 299  IQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSASSE 348


>ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195659123|gb|ACG49029.1|
            RNA-binding protein Nova-1 [Zea mays]
          Length = 344

 Score =  373 bits (957), Expect = e-100
 Identities = 209/345 (60%), Positives = 250/345 (72%), Gaps = 23/345 (6%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLPRSPTA-------GDD-EKQTHIRILVSNTEAGCIIGKG 1095
            MEAP      SP++AP+R+  PRSP         GDD EK  H+R LVSN  AGCIIGKG
Sbjct: 1    MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKG 58

Query: 1094 GSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDGN 915
            GSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+ G+V++AMELI EKL +E E+ N
Sbjct: 59   GSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFN 118

Query: 914  DAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTG 738
            +AE R KVRL+VPN+SCG IIGKGG+TIKSFIEES AGIKISPQDNN  GL+DRLVT+TG
Sbjct: 119  EAEARPKVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG 178

Query: 737  LFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVI 558
             F+ QM AI LIL +L ED HYP  L+SP+ Y+  +  +Y P              + V 
Sbjct: 179  TFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSY-PGVPVGYMIPQVPYNNAVN 237

Query: 557  SHPSRSPGGPQEGQ--------------SNSVTIGIADEHIGAVVGRGGRNITEISQVSG 420
              P+   GG  +                  S+TIGIADEHIGAVVGR GRNITEI Q SG
Sbjct: 238  YGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASG 297

Query: 419  ARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            ARIKISDRGDFISGTSDRKVTITG+ EAI+TAESMIMQ+VS++++
Sbjct: 298  ARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSE 342


>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  372 bits (956), Expect = e-100
 Identities = 208/330 (63%), Positives = 250/330 (75%), Gaps = 8/330 (2%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLP-RSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEF 1074
            ME+ +     SP+ A +RS  P +SPT+   EK T+IR LVSN  AG +IGKGGSTI+EF
Sbjct: 1    MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 1073 QSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGR 900
            QS+SGARIQLSRNHE FPGTSDRI+++SG + +V++AMELI  KL +EL  ED +D E R
Sbjct: 61   QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 899  SKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNA-GLNDRLVTLTGLFEEQ 723
            +KVRLIVPNSSCG+IIGKGG+TIKSFIE+S+AGIKISPQDNN  GLNDRLVTLTG  +EQ
Sbjct: 121  TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 722  MRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSR 543
            MRAI LILS+L ED HY Q +++P+ Y+A    TY                   +S+PS 
Sbjct: 181  MRAIDLILSKLSEDPHYLQAMHAPFSYAA---ATYNS-----------------MSYPSN 220

Query: 542  SPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGT 375
              GG     +E +SNSVTIG+AD HIG V+GRGGRNI EISQ+SGARIKISDRGDF+SGT
Sbjct: 221  GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 280

Query: 374  SDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            +DRKVTITGS  AI+ AESMIMQKV+  TD
Sbjct: 281  TDRKVTITGSQRAIRQAESMIMQKVAYATD 310


>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
          Length = 334

 Score =  372 bits (955), Expect = e-100
 Identities = 205/330 (62%), Positives = 248/330 (75%), Gaps = 8/330 (2%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLP-RSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEF 1074
            ME+ +     SP+ A +RS  P +SPT+   EK T+IR LVSN  AG +IGKGGSTI+EF
Sbjct: 1    MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 1073 QSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGR 900
            QS+SGARIQLSRNHE FPGTSDRI+++SG + +V++AMELI  KL +EL  ED +D E R
Sbjct: 61   QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 899  SKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNA-GLNDRLVTLTGLFEEQ 723
            +KVRLIVPNSSCG+IIGKGG+TIKSFIE+S+AGIKISPQDNN  GLNDRLVTLTG  +EQ
Sbjct: 121  TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 722  MRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSR 543
            MRAI LILS+L ED HY Q +++P+ Y+      +                   +S+PS 
Sbjct: 181  MRAIDLILSKLSEDPHYLQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSN 240

Query: 542  SPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGT 375
              GG     +E +SNSVTIG+AD HIG V+GRGGRNI EISQ+SGARIKISDRGDF+SGT
Sbjct: 241  GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 300

Query: 374  SDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            +DRKVTITGS  AI+ AESMIMQKV+  TD
Sbjct: 301  TDRKVTITGSQRAIRQAESMIMQKVAYATD 330


>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  372 bits (955), Expect = e-100
 Identities = 208/330 (63%), Positives = 250/330 (75%), Gaps = 8/330 (2%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLP-RSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEF 1074
            ME+ +     SP+ A +RS  P +SPT+   EK T+IR LVSN  AG +IGKGGSTI+EF
Sbjct: 1    MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 1073 QSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGR 900
            QS+SGARIQLSRNHE FPGTSDRI+++SG + +V++AMELI  KL +EL  ED +D E R
Sbjct: 61   QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 899  SKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNA-GLNDRLVTLTGLFEEQ 723
            +KVRLIVPNSSCG+IIGKGG+TIKSFIE+S+AGIKISPQDNN  GLNDRLVTLTG  +EQ
Sbjct: 121  TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 722  MRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSR 543
            MRAI LILS+L ED HY Q +++P+ Y+A    TY                   +S+PS 
Sbjct: 181  MRAIDLILSKLSEDPHYLQAMHAPFSYAA----TYNS-----------------MSYPSN 219

Query: 542  SPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGT 375
              GG     +E +SNSVTIG+AD HIG V+GRGGRNI EISQ+SGARIKISDRGDF+SGT
Sbjct: 220  GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 279

Query: 374  SDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            +DRKVTITGS  AI+ AESMIMQKV+  TD
Sbjct: 280  TDRKVTITGSQRAIRQAESMIMQKVAYATD 309


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  370 bits (949), Expect = 1e-99
 Identities = 200/328 (60%), Positives = 245/328 (74%), Gaps = 7/328 (2%)
 Frame = -2

Query: 1247 EAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQS 1068
            E P++H    P         P+SP+   +EK T+IR LVSN+ AG +IGKGGSTI++FQS
Sbjct: 13   EGPRKHAASPP---------PKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQS 63

Query: 1067 QSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRSK 894
            QSGARIQLSRNHE FPGT+DRI++VSG + ++ RA+ELI  KL SEL  ED NDAE ++K
Sbjct: 64   QSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTK 123

Query: 893  VRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEEQMR 717
            VRL+VPN SCG IIGKGG+TI+SFIE+S+AGIKISPQDNN  G NDRLVTLTG F+EQMR
Sbjct: 124  VRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMR 183

Query: 716  AIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSRSP 537
            AI LI+S+L ED HY Q++NSP+ Y  Y  V Y                + V   P+ + 
Sbjct: 184  AIELIVSKLSEDPHYAQSMNSPFSYPGYQGVPY----TYVLPSVAPPAYNAVNYRPNGAA 239

Query: 536  GG----PQEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGTSD 369
            GG     +E +SNS+T+G+ADEHIG VVGRGGRNI EISQ SGARIKISDRGD++SGT+D
Sbjct: 240  GGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTD 299

Query: 368  RKVTITGSPEAIQTAESMIMQKVSSNTD 285
            RKVTITGS  AI+TAESMI+QKV+  T+
Sbjct: 300  RKVTITGSQRAIRTAESMILQKVAYATE 327


>ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, partial [Oryza
            brachyantha]
          Length = 321

 Score =  368 bits (945), Expect = 3e-99
 Identities = 200/319 (62%), Positives = 242/319 (75%), Gaps = 18/319 (5%)
 Frame = -2

Query: 1187 PRSPTAGDDEKQ--THIRILVSNTEAGCIIGKGGSTISEFQSQSGARIQLSRNHEVFPGT 1014
            P+ P + +D+K+  TH+R LVSNT AGCIIGKGGSTI++FQSQSGARIQLSR+HE FPGT
Sbjct: 3    PQHPPSSEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 62

Query: 1013 SDRILLVSGVLGDVIRAMELIQEKLFSELEDGNDAEGRSKVRLIVPNSSCGAIIGKGGST 834
            +DRI++VSG+  +VI+AMELI EKL +E E+ N+AE R KVRL+VPNSSCG IIGKGG+T
Sbjct: 63   NDRIIMVSGLFDEVIKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGAT 122

Query: 833  IKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEEQMRAIFLILSRLIEDAHYPQTLN 657
            IKSFIE+S AGIKISPQDNN  GL+DRLVT+TG  + QMRAI+LILS+L ED HYP  L+
Sbjct: 123  IKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLS 182

Query: 656  SPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSRS----------PGGPQEGQSN- 510
            SP+ Y+  S  +Y P              +PV   P+ +          P  P    +N 
Sbjct: 183  SPFPYAGLSFPSY-PGVPVGYMIPQVPYNNPVNYGPNNNGYGGRYQNNKPSTPMRSPANN 241

Query: 509  ----SVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGTSDRKVTITGSP 342
                S+TIGIADEHIGAVVGR GRNITEI Q SGARIKISDRGDFI+GTSDRKVTITG+ 
Sbjct: 242  DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTS 301

Query: 341  EAIQTAESMIMQKVSSNTD 285
            EAIQ AESMIMQ+VS++++
Sbjct: 302  EAIQAAESMIMQRVSASSE 320


>dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 360

 Score =  368 bits (944), Expect = 4e-99
 Identities = 206/359 (57%), Positives = 244/359 (67%), Gaps = 37/359 (10%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRS---------------HLPRSPTAGDDEKQTHIRILVSNTEA 1116
            MEAP      SPDTAP+R+               H P +    D EK TH+R LVSNT A
Sbjct: 1    MEAPGSPYASSPDTAPKRAPRSSPPPPQDRPDADHDPAADHEDDKEKPTHLRFLVSNTAA 60

Query: 1115 GCIIGKGGSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLF 936
            GCIIGKGGSTI++FQSQSGARIQLSR+HE FPGT+DRI++VSG+  +V++AMEL+ EKL 
Sbjct: 61   GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVVKAMELVLEKLL 120

Query: 935  SELEDGNDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLND 759
            SE E+ N+AE R K RL+VPNSSCG IIGKGG+TIKSFIE+S AGIKISPQDNN  GL+D
Sbjct: 121  SEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNNFVGLHD 180

Query: 758  RLVTLTGLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXX 579
            RLVT+TG    QMRAI LILS+L ED HYP  L+SP+ Y+     +Y             
Sbjct: 181  RLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAAVPVGYMIPPV 240

Query: 578  GTASPVISHP----------------SRSPGGPQEGQSN-----SVTIGIADEHIGAVVG 462
               + V   P                +  PG P    +N     S TIG+ADEHIGAVVG
Sbjct: 241  PYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTPVRSPANNDAQESHTIGVADEHIGAVVG 300

Query: 461  RGGRNITEISQVSGARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            R GRNITEI Q SGARIKISDRGDFI+GTSDRKVTITGS EAIQ AE+MIMQ+V+++ +
Sbjct: 301  RAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGSSEAIQAAEAMIMQRVTASQE 359


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
          Length = 337

 Score =  365 bits (938), Expect = 2e-98
 Identities = 201/333 (60%), Positives = 246/333 (73%), Gaps = 12/333 (3%)
 Frame = -2

Query: 1247 EAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQS 1068
            E P++H    P         P+SP+   +EK T+IR LVSN+ AG +IGKGGSTI++FQS
Sbjct: 13   EGPRKHAASPP---------PKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQS 63

Query: 1067 QSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRSK 894
            QSGARIQLSRNHE FPGT+DRI++VSG + ++ RA+ELI  KL SEL  ED NDAE ++K
Sbjct: 64   QSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTK 123

Query: 893  VRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEEQMR 717
            VRL+VPN SCG IIGKGG+TI+SFIE+S+AGIKISPQDNN  G NDRLVTLTG F+EQMR
Sbjct: 124  VRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMR 183

Query: 716  AIFLILSRLIEDAHYPQTLNSPYQY-----SAYSPVTYRPXXXXXXXXXXXGTASPVISH 552
            AI LI+S+L ED HY Q++NSP+ Y     S Y  V Y                + V   
Sbjct: 184  AIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPY----TYVLPSVAPPAYNAVNYR 239

Query: 551  PSRSPGG----PQEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFI 384
            P+ + GG     +E +SNS+T+G+ADEHIG VVGRGGRNI EISQ SGARIKISDRGD++
Sbjct: 240  PNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYV 299

Query: 383  SGTSDRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            SGT+DRKVTITGS  AI+TAESMI+QKV+  T+
Sbjct: 300  SGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332


>gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
          Length = 313

 Score =  364 bits (935), Expect = 4e-98
 Identities = 197/307 (64%), Positives = 232/307 (75%), Gaps = 13/307 (4%)
 Frame = -2

Query: 1166 DDEKQTHIRILVSNTEAGCIIGKGGSTISEFQSQSGARIQLSRNHEVFPGTSDRILLVSG 987
            D EK TH+R LVSNT AGCIIGKGGSTI+EFQSQSGARIQLSR+HE FPGT+DRI++VSG
Sbjct: 6    DKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSG 65

Query: 986  VLGDVIRAMELIQEKLFSELEDGNDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESR 807
            +  +VI+AMELI EKL +E E+ N+AE R KVRL+VPNSSCG IIGKGGSTIKSFIE+S 
Sbjct: 66   LFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSH 125

Query: 806  AGIKISPQDNN-AGLNDRLVTLTGLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYS 630
            AGIKISPQDNN  GL+DRLVT+TG  + QMRAI+LILS+L ED HYP  L+SP+ Y+   
Sbjct: 126  AGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLG 185

Query: 629  -------PVTYRPXXXXXXXXXXXGTASPVISHPSRSPGGPQEGQSN-----SVTIGIAD 486
                   PV Y             G       + +  P  P    +N     S+TIGIAD
Sbjct: 186  FPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDSLTIGIAD 245

Query: 485  EHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGTSDRKVTITGSPEAIQTAESMIMQ 306
            EHIGAVVGR GRNITEI Q SGARIKISDRGDFI+GTS+RKVTITG+ EAIQ AESMIMQ
Sbjct: 246  EHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQ 305

Query: 305  KVSSNTD 285
            +V+++++
Sbjct: 306  RVTASSE 312



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
 Frame = -2

Query: 917 NDAEGRSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKIS-PQDNNAGLNDRLVTLT 741
           +D E  + +R +V N++ G IIGKGGSTI  F  +S A I++S   +   G NDR++ ++
Sbjct: 5   DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 64

Query: 740 GLFEEQMRAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPV 561
           GLF+E ++A+ LIL +L+ +        +            RP                 
Sbjct: 65  GLFDEVIKAMELILEKLLAEGEESNEAEA------------RP----------------- 95

Query: 560 ISHPSRSPGGPQEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFIS 381
                             V + + +   G ++G+GG  I    + S A IKIS + +   
Sbjct: 96  -----------------KVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFV 138

Query: 380 GTSDRKVTITGSPEAIQTAESMIMQKVSSN 291
           G  DR VT+TG  +    A  +I+ K+S +
Sbjct: 139 GLHDRLVTVTGPLDHQMRAIYLILSKLSED 168



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 33/88 (37%), Positives = 49/88 (55%)
 Frame = -2

Query: 1190 LPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQSQSGARIQLSRNHEVFPGTS 1011
            L     + + E +  +R++V N+  G IIGKGGSTI  F   S A I++S     F G  
Sbjct: 82   LAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLH 141

Query: 1010 DRILLVSGVLGDVIRAMELIQEKLFSEL 927
            DR++ V+G L   +RA+ LI  KL  ++
Sbjct: 142  DRLVTVTGPLDHQMRAIYLILSKLSEDV 169


>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
            arietinum]
          Length = 315

 Score =  363 bits (933), Expect = 7e-98
 Identities = 195/325 (60%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
 Frame = -2

Query: 1247 EAPKQHRDLSPDTAPRRSHLPRSPTAGDD-EKQTHIRILVSNTEAGCIIGKGGSTISEFQ 1071
            E P++ R  SP         P+SP+  D  EK T++R LVSN+ AG +IGKGGSTI++FQ
Sbjct: 13   EGPRKQRATSPP--------PKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQ 64

Query: 1070 SQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRS 897
            SQSGARIQLSRN+E FPGT+DRI++VSG + +++RA+ELI  KL +EL  ED ND E ++
Sbjct: 65   SQSGARIQLSRNNEFFPGTTDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDVEPKT 124

Query: 896  KVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNA-GLNDRLVTLTGLFEEQM 720
            KVRLIVPN SCG IIGKGG+TI+SFIE+S+AGIKISPQDN+  G NDR+V++TG  +EQM
Sbjct: 125  KVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTLDEQM 184

Query: 719  RAIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISHPSRS 540
            RA+ LI+S+L ED HY Q++NSP+ YSAY+ V YRP                        
Sbjct: 185  RAVDLIVSKLAEDPHYSQSMNSPFSYSAYNSVNYRPNGAAGKFQ---------------- 228

Query: 539  PGGPQEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGTSDRKV 360
                +E +SNS+TIGIADEHIG VVGRGGRNI +I+QVSGA+IKISDRGD+ISGT+DRKV
Sbjct: 229  --NSKEERSNSMTIGIADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKV 286

Query: 359  TITGSPEAIQTAESMIMQKVSSNTD 285
            TITGS  AI+TAESMIMQKV+  T+
Sbjct: 287  TITGSQRAIRTAESMIMQKVAYATE 311


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
          Length = 337

 Score =  363 bits (931), Expect = 1e-97
 Identities = 198/329 (60%), Positives = 244/329 (74%), Gaps = 8/329 (2%)
 Frame = -2

Query: 1247 EAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQS 1068
            E P++H    P         P+ P+   +EK T+IR LVSN+ AG +IGKGGSTI++FQS
Sbjct: 13   EGPRKHAASPP---------PKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQS 63

Query: 1067 QSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEGRSK 894
            QSGARIQLSRNHE FPGT+DRI++VSG + ++ RA+ELI  KL SEL  ED NDAE ++K
Sbjct: 64   QSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTK 123

Query: 893  VRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNA-GLNDRLVTLTGLFEEQMR 717
            VRL+VPN SCG IIGKGG TI+SFIE+S+AGIKISPQDNN  G NDRLV LTG F+EQMR
Sbjct: 124  VRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMR 183

Query: 716  AIFLILSRLIEDAHYPQTLNSPYQYSAYSPVTYRPXXXXXXXXXXXGTASPVISH-PSRS 540
            AI LI+S+L ED HY Q++NSP+ Y       Y+              A   +++ P+ +
Sbjct: 184  AIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGT 243

Query: 539  PGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFISGTS 372
             GG     +E +SNS+T+G+ADEHIG VVGRGGRNI EISQVSGARIKISDRGD+ISGT+
Sbjct: 244  AGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTT 303

Query: 371  DRKVTITGSPEAIQTAESMIMQKVSSNTD 285
            DRKVTITGS  AI+TAESMI+QKV+  T+
Sbjct: 304  DRKVTITGSQRAIRTAESMILQKVAYATE 332


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  363 bits (931), Expect = 1e-97
 Identities = 199/328 (60%), Positives = 245/328 (74%), Gaps = 10/328 (3%)
 Frame = -2

Query: 1250 MEAPKQHRDLSPDTAPRRSHLP--RSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISE 1077
            ME+ +     SP+  PR+   P  +SPT+   EK T++R LVSN  AG +IGKGG+TI++
Sbjct: 1    MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60

Query: 1076 FQSQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSEL--EDGNDAEG 903
            FQSQSGARIQLSRN+E FPGTSDRI+L+SG+L DV++ +EL+  KL SEL  EDG+D + 
Sbjct: 61   FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDP 120

Query: 902  RSKVRLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNN-AGLNDRLVTLTGLFEE 726
            R+KVRL+VPNSSCG+IIGKGGS IKSFIEES+AGIKISPQDNN  GLNDRLVT+TG  EE
Sbjct: 121  RTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEE 180

Query: 725  QMRAIFLILSRLIEDAHYPQTLNSPYQYS-AYSPVTYRPXXXXXXXXXXXGTASPVISHP 549
            QMRAI LILS+L +D HY QT+++P+ Y+ AY+ + Y                       
Sbjct: 181  QMRAIDLILSKLYDDPHYVQTMHAPFSYAVAYNSMNY----------------------G 218

Query: 548  SRSPGGP----QEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISDRGDFIS 381
            +   GG     +E ++NSVTIG+AD HIG VVGRGGRNI EISQVSGARIKISDRGDF+S
Sbjct: 219  ANGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMS 278

Query: 380  GTSDRKVTITGSPEAIQTAESMIMQKVS 297
            GT+DRK+ ITGS  AI+TAE MIMQKV+
Sbjct: 279  GTNDRKIIITGSQRAIRTAEGMIMQKVA 306