BLASTX nr result

ID: Zingiber24_contig00004744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004744
         (655 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA43288.1| TPA: hypothetical protein ZEAMMB73_597004 [Zea m...    59   2e-06
ref|NP_001173258.1| Os03g0139300 [Oryza sativa Japonica Group] g...    57   4e-06

>tpg|DAA43288.1| TPA: hypothetical protein ZEAMMB73_597004 [Zea mays]
          Length = 313

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
 Frame = +1

Query: 1   SRAKLKACLGAASLLKHTRSXXXXXXXXXXXXXXXX------YNISKNCVKVLEGFIGLQ 162
           S  +LKA L AASLL+   +                      Y +SKN  KV+EGF+GLQ
Sbjct: 147 SSKRLKAALAAASLLRLAAAAPAGLHAASPAGVAVLAVLKSSYKLSKNTSKVVEGFLGLQ 206

Query: 163 LNSAVREGIDALGLAVRVATVGKEIKRLLLIEWQKRTQIECLILGGDSRP 312
           L+   R GIDALG+ V+VA +  E+   +   +    +  C++  G +RP
Sbjct: 207 LHKGFRNGIDALGVVVKVAVIVSEVAVWVGARFWGYGRARCVMFLGFTRP 256


>ref|NP_001173258.1| Os03g0139300 [Oryza sativa Japonica Group]
           gi|108706092|gb|ABF93887.1| expressed protein [Oryza
           sativa Japonica Group] gi|125542333|gb|EAY88472.1|
           hypothetical protein OsI_09943 [Oryza sativa Indica
           Group] gi|125584855|gb|EAZ25519.1| hypothetical protein
           OsJ_09343 [Oryza sativa Japonica Group]
           gi|215687379|dbj|BAG91944.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255674189|dbj|BAH91986.1| Os03g0139300 [Oryza sativa
           Japonica Group]
          Length = 254

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
 Frame = +1

Query: 1   SRAKLKACLGAASLLKHTRSXXXXXXXXXXXXXXXX----YNISKNCVKVLEGFIGLQLN 168
           S  +LKA   AASLL+   +                    Y +SKN  KV+EGF+GLQ++
Sbjct: 92  SDKRLKAAFAAASLLRLAAAAPPPVASPTGVAALAILKSGYKLSKNSAKVIEGFLGLQVH 151

Query: 169 SAVREGIDALGLAVRVATVGKEI 237
             +R G+DALG+ V+VA +  E+
Sbjct: 152 KGIRNGVDALGVVVKVAVIASEV 174


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